RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
SMARCA4-206ENST00000538456 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
SMARCA4-206ENST00000538456 SERF1AO75920 110 aa8.35□□□□□ -1.07
SMARCA4-206ENST00000538456 LINC00310P59036 64 aa8.35□□□□□ -1.07
SMARCA4-206ENST00000538456 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
SMARCA4-206ENST00000538456 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
SMARCA4-206ENST00000538456 NPYP01303 97 aa8.34□□□□□ -1.07
SMARCA4-206ENST00000538456 TLX1NBP0CAT3 122 aa8.34□□□□□ -1.07
SMARCA4-206ENST00000538456 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
SMARCA4-206ENST00000538456 NRACQ8N912 160 aa8.34□□□□□ -1.07
SMARCA4-206ENST00000538456 MAP1LC3AQ9H492 121 aa8.34□□□□□ -1.07
SMARCA4-206ENST00000538456 F8WDY8 70 aa8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 PPP1R17O96001 155 aa8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 S100A2P29034 98 aa8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 RPL39P62891 51 aaKnown RBP8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 TMEM18Q96B42 140 aa8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 CHCHD1Q96BP2 118 aaKnown RBP8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
SMARCA4-206ENST00000538456 IGHV3OR16-9A0A0B4J2B5 98 aa8.32□□□□□ -1.08
SMARCA4-206ENST00000538456 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
SMARCA4-206ENST00000538456 NUPR1O60356 82 aa8.32□□□□□ -1.08
SMARCA4-206ENST00000538456 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
SMARCA4-206ENST00000538456 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
SMARCA4-206ENST00000538456 PACRGQ96M98 296 aaPredicted RBP8.32□□□□□ -1.08
SMARCA4-206ENST00000538456 IFITM10A6NMD0 228 aa8.31□□□□□ -1.08
SMARCA4-206ENST00000538456 HSBP1O75506 76 aa8.31□□□□□ -1.08
SMARCA4-206ENST00000538456 LINC00614P0C842 121 aa8.31□□□□□ -1.08
SMARCA4-206ENST00000538456 HIST1H2BLQ99880 126 aa8.31□□□□□ -1.08
SMARCA4-206ENST00000538456 C20orf78Q9BR46 151 aa8.31□□□□□ -1.08
SMARCA4-206ENST00000538456 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
SMARCA4-206ENST00000538456 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
SMARCA4-206ENST00000538456 FA2HQ7L5A8 372 aa8.3□□□□□ -1.08
SMARCA4-206ENST00000538456 FAM104AQ969W3 186 aa8.3□□□□□ -1.08
SMARCA4-206ENST00000538456 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 FABP4P15090 132 aa8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 IFI27P40305 119 aaPredicted RBP8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 C9orf129Q5T035 196 aaKnown RBP8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 Q8N8P6 123 aa8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 SMIM2Q9BVW6 85 aa8.29□□□□□ -1.08
SMARCA4-206ENST00000538456 ZNF861PO60384 105 aa8.28□□□□□ -1.08
SMARCA4-206ENST00000538456 C2orf82Q6UX34 121 aa8.28□□□□□ -1.08
SMARCA4-206ENST00000538456 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
SMARCA4-206ENST00000538456 K7EMI3 77 aa8.27□□□□□ -1.09
SMARCA4-206ENST00000538456 AKR1D1P51857 326 aa8.27□□□□□ -1.09
SMARCA4-206ENST00000538456 SPANXA1Q9NS26 97 aa8.27□□□□□ -1.09
SMARCA4-206ENST00000538456 A0A087X002 238 aa8.26□□□□□ -1.09
SMARCA4-206ENST00000538456 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
SMARCA4-206ENST00000538456 KIAA0087Q14695 138 aa8.26□□□□□ -1.09
SMARCA4-206ENST00000538456 MRPS36P82909 103 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-206ENST00000538456 FAM19A2Q8N3H0 131 aa8.25□□□□□ -1.09
SMARCA4-206ENST00000538456 TCAPO15273 167 aa8.24□□□□□ -1.09
SMARCA4-206ENST00000538456 LINC00469Q8N7U9 141 aa8.24□□□□□ -1.09
SMARCA4-206ENST00000538456 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
SMARCA4-206ENST00000538456 A0A096LNJ9 63 aa8.23□□□□□ -1.09
SMARCA4-206ENST00000538456 HBDP02042 147 aa8.23□□□□□ -1.09
SMARCA4-206ENST00000538456 PMCHL1Q16048 86 aa8.23□□□□□ -1.09
SMARCA4-206ENST00000538456 ORMDL2Q53FV1 153 aa8.23□□□□□ -1.09
SMARCA4-206ENST00000538456 TYMSOSQ8TAI1 123 aa8.23□□□□□ -1.09
SMARCA4-206ENST00000538456 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
SMARCA4-206ENST00000538456 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
SMARCA4-206ENST00000538456 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
SMARCA4-206ENST00000538456 SMIM6P0DI80 62 aa8.21□□□□□ -1.1
SMARCA4-206ENST00000538456 CRYGAP11844 174 aa8.21□□□□□ -1.1
SMARCA4-206ENST00000538456 XAGE1AQ9HD64 81 aa8.21□□□□□ -1.1
SMARCA4-206ENST00000538456 HSPB8Q9UJY1 196 aa8.21□□□□□ -1.1
SMARCA4-206ENST00000538456 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
SMARCA4-206ENST00000538456 G0S2P27469 103 aa8.2□□□□□ -1.1
SMARCA4-206ENST00000538456 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
SMARCA4-206ENST00000538456 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
SMARCA4-206ENST00000538456 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
SMARCA4-206ENST00000538456 JOSD1Q15040 202 aaPredicted RBP8.19□□□□□ -1.1
SMARCA4-206ENST00000538456 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
SMARCA4-206ENST00000538456 CDIP1Q9H305 208 aa8.19□□□□□ -1.1
SMARCA4-206ENST00000538456 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
SMARCA4-206ENST00000538456 PRSS2P07478 247 aa8.18□□□□□ -1.1
SMARCA4-206ENST00000538456 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
SMARCA4-206ENST00000538456 KRTDAPP60985 99 aa8.18□□□□□ -1.1
SMARCA4-206ENST00000538456 CKS1BP61024 79 aa8.18□□□□□ -1.1
SMARCA4-206ENST00000538456 PYY3Q5JQD4 70 aa8.18□□□□□ -1.1
SMARCA4-206ENST00000538456 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
SMARCA4-206ENST00000538456 BCE1O60756 84 aa8.17□□□□□ -1.1
SMARCA4-206ENST00000538456 LINC00173Q6ZV60 143 aa8.17□□□□□ -1.1
SMARCA4-206ENST00000538456 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
SMARCA4-206ENST00000538456 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
SMARCA4-206ENST00000538456 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
SMARCA4-206ENST00000538456 MUC17Q685J3 4493 aa8.17□□□□□ -1.1
SMARCA4-206ENST00000538456 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 ATP5LO75964 103 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 TEX43Q6ZNM6 134 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 CYSLTR1Q9Y271 337 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 PYGO1Q9Y3Y4 419 aa8.16□□□□□ -1.1
SMARCA4-206ENST00000538456 RPL37AP8A6NKH3 93 aa8.15□□□□□ -1.1
SMARCA4-206ENST00000538456 SYS1-DBNDD2H3BUS1 97 aa8.15□□□□□ -1.1
SMARCA4-206ENST00000538456 C6orf226Q5I0X4 101 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms