RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ANKRD39Q53RE8 183 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 C10orf91Q5T1B1 145 aa4.86□□□□□ -1.63
MSH6-209ENST00000538136 CDPF1Q6NVV7 123 aa4.86□□□□□ -1.63
MSH6-209ENST00000538136 TRAV8-4A0A0B4J246 113 aa4.86□□□□□ -1.63
MSH6-209ENST00000538136 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
MSH6-209ENST00000538136 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
MSH6-209ENST00000538136 CNFNQ9BYD5 112 aa4.86□□□□□ -1.63
MSH6-209ENST00000538136 FABP2P12104 132 aa4.85□□□□□ -1.63
MSH6-209ENST00000538136 PLEKHB2Q96CS7 222 aa4.85□□□□□ -1.63
MSH6-209ENST00000538136 TRBV6-5A0A0K0K1A5 114 aa4.85□□□□□ -1.63
MSH6-209ENST00000538136 A8MTW9 85 aa4.85□□□□□ -1.63
MSH6-209ENST00000538136 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
MSH6-209ENST00000538136 A0A087WTM6 91 aa4.84□□□□□ -1.63
MSH6-209ENST00000538136 ZNF22P17026 224 aaPredicted RBP4.84□□□□□ -1.63
MSH6-209ENST00000538136 IBA57-AS1B1ANH7 110 aa4.84□□□□□ -1.63
MSH6-209ENST00000538136 PYY3Q5JQD4 70 aa4.84□□□□□ -1.63
MSH6-209ENST00000538136 FAM19A1Q7Z5A9 133 aa4.84□□□□□ -1.63
MSH6-209ENST00000538136 MTURNQ8N3F0 131 aa4.84□□□□□ -1.63
MSH6-209ENST00000538136 C7orf33Q8WU49 177 aa4.84□□□□□ -1.63
MSH6-209ENST00000538136 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 ODF1Q14990 250 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 URB1-AS1Q96HZ7 61 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 TAL2Q16559 108 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 COX8CQ7Z4L0 72 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
MSH6-209ENST00000538136 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 ERG28Q9UKR5 140 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 IGKV2D-26A0A0A0MRZ7 120 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 K7EP13 123 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 VAMP3Q15836 100 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 MAPKAPK5-AS1Q8N8E1 139 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 LEPROTO15243 131 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 UBE2D1P51668 147 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 IGIPA6NJ69 53 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 M0QXV9 152 aa4.82□□□□□ -1.64
MSH6-209ENST00000538136 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
MSH6-209ENST00000538136 A0A087WYN8 130 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 SNCGO76070 127 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 TSPAN13O95857 204 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 K7ERJ3 54 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 DNAL4O96015 105 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 DDTP30046 118 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 PRLHP81277 87 aa4.81□□□□□ -1.64
MSH6-209ENST00000538136 TMEM126AQ9H061 195 aa4.8□□□□□ -1.64
MSH6-209ENST00000538136 TMEM238C9JI98 176 aa4.8□□□□□ -1.64
MSH6-209ENST00000538136 SLC25A20O43772 301 aa4.8□□□□□ -1.64
MSH6-209ENST00000538136 GAGE2AQ6NT46 116 aa4.8□□□□□ -1.64
MSH6-209ENST00000538136 J3QL48 77 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 LINC00612Q8N6U2 182 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 A0A096LNJ9 63 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 RPL24P83731 157 aaKnown RBP4.79□□□□□ -1.64
MSH6-209ENST00000538136 JOSD1Q15040 202 aaPredicted RBP4.79□□□□□ -1.64
MSH6-209ENST00000538136 SMIM1B2RUZ4 78 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 H3BNG1 76 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 UFSP1Q6NVU6 142 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
MSH6-209ENST00000538136 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 IGHV3OR16-9A0A0B4J2B5 98 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 LOC107984640A0A0U1RRK4 108 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 LINC01549A6NIU2 74 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 C9orf153Q5TBE3 101 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 ANAPC11Q9NYG5 84 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 LINC00310P59036 64 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
MSH6-209ENST00000538136 Q6ZVH6 145 aa4.77□□□□□ -1.65
MSH6-209ENST00000538136 PCP4P48539 62 aa4.77□□□□□ -1.65
MSH6-209ENST00000538136 UQCR10Q9UDW1 63 aa4.77□□□□□ -1.65
MSH6-209ENST00000538136 A4D1N5 150 aa4.77□□□□□ -1.65
MSH6-209ENST00000538136 RPL13AP40429 203 aaKnown RBP4.77□□□□□ -1.65
MSH6-209ENST00000538136 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
MSH6-209ENST00000538136 C6orf48Q9UBA6 75 aa4.77□□□□□ -1.65
MSH6-209ENST00000538136 COX6CP09669 75 aa4.76□□□□□ -1.65
MSH6-209ENST00000538136 IGLC3P0DOY3 106 aa4.76□□□□□ -1.65
MSH6-209ENST00000538136 Q8N814 137 aa4.76□□□□□ -1.65
MSH6-209ENST00000538136 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
MSH6-209ENST00000538136 TMEM238LA0A1B0GVL6 79 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 A6NJY4 79 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 H7C423 109 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 MRPL52Q86TS9 123 aaKnown RBP4.75□□□□□ -1.65
MSH6-209ENST00000538136 FAM30AQ9NZY2 134 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 PYGO1Q9Y3Y4 419 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 A0A0J9YXY3 114 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 H3BUT2 72 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 CBY1Q9Y3M2 126 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 SLPIP03973 132 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 SCXQ7RTU7 201 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 UPK3BQ9BT76 320 aa4.75□□□□□ -1.65
MSH6-209ENST00000538136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.75□□□□□ -1.65
MSH6-209ENST00000538136 Q6ZRP5 223 aa4.74□□□□□ -1.65
MSH6-209ENST00000538136 SNHG12Q9BXW3 62 aa4.74□□□□□ -1.65
MSH6-209ENST00000538136 TMEM223A0PJW6 202 aa4.74□□□□□ -1.65
MSH6-209ENST00000538136 LBHQ53QV2 105 aaPredicted RBP4.74□□□□□ -1.65
MSH6-209ENST00000538136 C4orf48Q5BLP8 95 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms