RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 ZNF702PQ9H963 129 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 IGHV3OR16-12A0A075B7B8 117 aa8.09□□□□□ -1.11
SEMA4D-221ENST00000537934 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
SEMA4D-221ENST00000537934 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
SEMA4D-221ENST00000537934 FP248Q71RG6 208 aaPredicted RBP8.09□□□□□ -1.11
SEMA4D-221ENST00000537934 ESM1Q9NQ30 184 aa8.09□□□□□ -1.11
SEMA4D-221ENST00000537934 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.12
SEMA4D-221ENST00000537934 IGKV2D-28P01615 120 aa8.09□□□□□ -1.12
SEMA4D-221ENST00000537934 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.12
SEMA4D-221ENST00000537934 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.12
SEMA4D-221ENST00000537934 WFDC9Q8NEX5 89 aa8.09□□□□□ -1.12
SEMA4D-221ENST00000537934 DNAJC9-AS1A6NH13 148 aa8.08□□□□□ -1.12
SEMA4D-221ENST00000537934 SEC61GP60059 68 aa8.08□□□□□ -1.12
SEMA4D-221ENST00000537934 Q9UF83 564 aa8.08□□□□□ -1.12
SEMA4D-221ENST00000537934 LECT2O14960 151 aa8.08□□□□□ -1.12
SEMA4D-221ENST00000537934 IGKV3-20P01619 116 aa8.08□□□□□ -1.12
SEMA4D-221ENST00000537934 ENHOQ6UWT2 76 aa8.08□□□□□ -1.12
SEMA4D-221ENST00000537934 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 LY6G6DO95868 133 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 KLKP1Q107X0 134 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 USMG5Q96IX5 58 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 H3BUA1 57 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 SPINK13Q1W4C9 94 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
SEMA4D-221ENST00000537934 SS18Q15532 418 aa8.06□□□□□ -1.12
SEMA4D-221ENST00000537934 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
SEMA4D-221ENST00000537934 V9GYY9 64 aa8.06□□□□□ -1.12
SEMA4D-221ENST00000537934 FN1P02751 2386 aaKnown RBP8.06□□□□□ -1.12
SEMA4D-221ENST00000537934 A0A0U1RQV1 116 aa8.06□□□□□ -1.12
SEMA4D-221ENST00000537934 Q6ZSN1 163 aa8.06□□□□□ -1.12
SEMA4D-221ENST00000537934 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
SEMA4D-221ENST00000537934 JMJD7-PLA2G4BH0Y9G9 81 aa8.05□□□□□ -1.12
SEMA4D-221ENST00000537934 SORL1Q92673 2214 aa8.05□□□□□ -1.12
SEMA4D-221ENST00000537934 F8P00451 2351 aa8.05□□□□□ -1.12
SEMA4D-221ENST00000537934 K7EMT4 169 aa8.04□□□□□ -1.12
SEMA4D-221ENST00000537934 SLPIP03973 132 aa8.04□□□□□ -1.12
SEMA4D-221ENST00000537934 RPL36AP83881 106 aaKnown RBP8.04□□□□□ -1.12
SEMA4D-221ENST00000537934 RPL36ALQ969Q0 106 aaKnown RBP8.04□□□□□ -1.12
SEMA4D-221ENST00000537934 WNK1Q9H4A3 2382 aa8.04□□□□□ -1.12
SEMA4D-221ENST00000537934 C1orf195Q5TG92 126 aa8.04□□□□□ -1.12
SEMA4D-221ENST00000537934 SNRPD3P62318 126 aaKnown RBP8.03□□□□□ -1.12
SEMA4D-221ENST00000537934 UBL5Q9BZL1 73 aa8.03□□□□□ -1.12
SEMA4D-221ENST00000537934 INAFM1C9JVW0 142 aa8.02□□□□□ -1.13
SEMA4D-221ENST00000537934 IGHV3-53P01767 116 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 C18orf65Q6ZTR6 163 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 BRK1Q8WUW1 75 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 TEP1Q99973 2627 aaKnown RBP8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 C2CD3Q4AC94 2353 aa8.01□□□□□ -1.13
SEMA4D-221ENST00000537934 NOTCH3Q9UM47 2321 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 F8WEM9 126 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 LINC00474Q9P2X8 69 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 TMEM89A2RUT3 159 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 K7EQG2 157 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 HTN1P15515 57 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 CCL18P55774 89 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 C11orf44Q8N8P7 122 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 RMI2Q96E14 147 aa8□□□□□ -1.13
SEMA4D-221ENST00000537934 NDUFC1O43677 76 aa7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 RNASE1P07998 156 aaKnown RBP7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 ATP5EP56381 51 aaPredicted RBP7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 DEFB136Q30KP8 78 aa7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 RBM3P98179 157 aaKnown RBP7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 KHDC1LQ5JSQ8 128 aa7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 SNURFQ9Y675 71 aa7.99□□□□□ -1.13
SEMA4D-221ENST00000537934 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
SEMA4D-221ENST00000537934 UBE2E2Q96LR5 201 aa7.98□□□□□ -1.13
SEMA4D-221ENST00000537934 LINC00158P58513 81 aa7.98□□□□□ -1.13
SEMA4D-221ENST00000537934 LINC00482Q8N8I6 264 aa7.98□□□□□ -1.13
SEMA4D-221ENST00000537934 COX7B2Q8TF08 81 aa7.98□□□□□ -1.13
SEMA4D-221ENST00000537934 LINC01006Q8NI28 216 aa7.97□□□□□ -1.13
SEMA4D-221ENST00000537934 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
SEMA4D-221ENST00000537934 CYSRT1A8MQ03 144 aa7.96□□□□□ -1.14
SEMA4D-221ENST00000537934 TRAV10A0A0B4J240 114 aa7.95□□□□□ -1.14
SEMA4D-221ENST00000537934 TENM1Q9UKZ4 2725 aa7.95□□□□□ -1.14
SEMA4D-221ENST00000537934 TRBV6-4A0A1B0GX49 114 aa7.95□□□□□ -1.14
SEMA4D-221ENST00000537934 PAX4O43316 350 aa7.95□□□□□ -1.14
SEMA4D-221ENST00000537934 Q8N814 137 aa7.95□□□□□ -1.14
SEMA4D-221ENST00000537934 IL17DQ8TAD2 202 aa7.95□□□□□ -1.14
SEMA4D-221ENST00000537934 A0A1W2PRX2 142 aa7.94□□□□□ -1.14
SEMA4D-221ENST00000537934 IBA57-AS1B1ANH7 110 aa7.94□□□□□ -1.14
SEMA4D-221ENST00000537934 SLURP1P55000 103 aa7.94□□□□□ -1.14
SEMA4D-221ENST00000537934 PRM2P04554 102 aa7.94□□□□□ -1.14
SEMA4D-221ENST00000537934 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
SEMA4D-221ENST00000537934 K7EQD1 137 aa7.93□□□□□ -1.14
SEMA4D-221ENST00000537934 Q6ZTI0 123 aa7.93□□□□□ -1.14
SEMA4D-221ENST00000537934 MAST4O15021 2626 aa7.93□□□□□ -1.14
SEMA4D-221ENST00000537934 C4orf3Q8WVX3 66 aa7.93□□□□□ -1.14
SEMA4D-221ENST00000537934 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
SEMA4D-221ENST00000537934 ATRQ13535 2644 aa7.92□□□□□ -1.14
SEMA4D-221ENST00000537934 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
SEMA4D-221ENST00000537934 Q6ZQT0 140 aa7.91□□□□□ -1.14
SEMA4D-221ENST00000537934 VWFP04275 2813 aa7.91□□□□□ -1.14
SEMA4D-221ENST00000537934 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
SEMA4D-221ENST00000537934 MIFP14174 115 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms