RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 NDUFB3O43676 98 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 LY6HO94772 140 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 LY6G6DO95868 133 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 BLCAPP62952 87 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 C19orf73Q9NVV2 129 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 CR1P17927 2039 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 IGHV3-16A0A0C4DH30 117 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 IGKV3OR2-268A0A0C4DH90 116 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 IGHV1-69P01742 117 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
MCF2-210ENST00000536274 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 LY6G5BQ8NDX9 201 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 ITPR2Q14571 2701 aa2.64□□□□□ -1.99
MCF2-210ENST00000536274 SPTAN1Q13813 2472 aaKnown RBP2.63□□□□□ -1.99
MCF2-210ENST00000536274 Q6ZSN1 163 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 LINC00467Q9BRT7 94 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 TOMM7Q9P0U1 55 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 ANK3Q12955 4377 aaKnown RBP2.63□□□□□ -1.99
MCF2-210ENST00000536274 TRAV7A0A075B6U4 112 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 IGHV4OR15-8A0A075B7B6 117 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 A0A087WW49 117 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 A0A096LNT2 108 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 A8MTW9 85 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 IGLV1-44P01699 117 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
MCF2-210ENST00000536274 DNHD1Q96M86 4753 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 PPP1R17O96001 155 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 IGLV1-47P01700 117 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 MIFP14174 115 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 CD164Q04900 197 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 KLKP1Q107X0 134 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 Q6ZRP5 223 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 SPTSSBQ8NFR3 76 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 ESM1Q9NQ30 184 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 F8P00451 2351 aa2.63□□□□□ -1.99
MCF2-210ENST00000536274 CRPP02741 224 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 STHQ8IWL8 128 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 CCL19Q99731 98 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 HIGD2AQ9BW72 106 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 HIVEP1P15822 2718 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 TRAV13-2A0A0B4J235 113 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 NDUFA1O15239 70 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 MRPL55Q7Z7F7 128 aaKnown RBP2.62□□□□□ -1.99
MCF2-210ENST00000536274 TMEM190Q8WZ59 177 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 CREBBPQ92793 2442 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 PLAC8L1A1L4L8 177 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 IGHV3-11P01762 117 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 CFHR3Q02985 330 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 PRR15Q8IV56 129 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 ORMDL1Q9P0S3 153 aa2.62□□□□□ -1.99
MCF2-210ENST00000536274 A8MUN3 132 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 LINC01547P58512 204 aaPredicted RBP2.61□□□□□ -1.99
MCF2-210ENST00000536274 ESRGQ1W209 222 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 SERTAD4-AS1Q5TG53 156 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 UBE2E2Q96LR5 201 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 IGHV3OR16-12A0A075B7B8 117 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 K7EQG2 157 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 Q6ZRU5 148 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 Q8N9W7 124 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
MCF2-210ENST00000536274 APOC4P55056 127 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 LINC00158P58513 81 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 SPINK13Q1W4C9 94 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 LINC00242Q5T6M2 205 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 C11orf71Q6IPW1 123 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 TMEM254Q8TBM7 123 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 CHCHD7Q9BUK0 85 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 UBL5Q9BZL1 73 aa2.61□□□□□ -1.99
MCF2-210ENST00000536274 NF1P21359 2839 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 NIPBLQ6KC79 2804 aaeCLIP2.6□□□□□ -1.99
MCF2-210ENST00000536274 TRBV7-4A0A0J9YYF1 115 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 SMIM1B2RUZ4 78 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 ATP6V0E1O15342 81 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 NREPQ16612 68 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 Q6ZTC4 211 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 CELA1Q9UNI1 258 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 IGHV7-81A0A0B4J1V7 117 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 BPY2O14599 106 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 FUSP35637 526 aaKnown RBP eCLIP2.6□□□□□ -1.99
MCF2-210ENST00000536274 CCL18P55774 89 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 NBASA2RRP1 2371 aa2.6□□□□□ -1.99
MCF2-210ENST00000536274 TRBV6-5A0A0K0K1A5 114 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 TMEM30BQ3MIR4 351 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 Q6ZVQ6 151 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 SPG11Q96JI7 2443 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 TRAV22A0A0B4J277 110 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 LINC01006Q8NI28 216 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 COX7B2Q8TF08 81 aa2.59□□□□□ -1.99
MCF2-210ENST00000536274 TEP1Q99973 2627 aaKnown RBP2.59□□□□□ -1.99
MCF2-210ENST00000536274 IBA57-AS1B1ANH7 110 aa2.59□□□□□ -2
MCF2-210ENST00000536274 APRG1Q8IVJ8 170 aa2.59□□□□□ -2
MCF2-210ENST00000536274 KRTAP4-7Q9BYR0 210 aa2.59□□□□□ -2
MCF2-210ENST00000536274 NSD1Q96L73 2696 aaPredicted RBP2.58□□□□□ -2
MCF2-210ENST00000536274 INAFM1C9JVW0 142 aa2.58□□□□□ -2
MCF2-210ENST00000536274 C10orf25Q5T742 122 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms