RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 TTTY12Q9BZ98 90 aa2□□□□□ -2.09
SPARCL1-208ENST00000535835 MYO7AQ13402 2215 aa2□□□□□ -2.09
SPARCL1-208ENST00000535835 SSC5DA1L4H1 1573 aa2□□□□□ -2.09
SPARCL1-208ENST00000535835 UBR3Q6ZT12 1888 aa2□□□□□ -2.09
SPARCL1-208ENST00000535835 KIAA1549LQ6ZVL6 1849 aa2□□□□□ -2.09
SPARCL1-208ENST00000535835 BCORQ6W2J9 1755 aa2□□□□□ -2.09
SPARCL1-208ENST00000535835 KIAA1549Q9HCM3 1950 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 IGKV1OR2-108A0A075B7D4 117 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 FAM168BA1KXE4 195 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 NDUFA1O15239 70 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 PRB4P10163 310 aaPredicted RBP1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 CCL18P55774 89 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 HAMPP81172 84 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 Q5W150 140 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 WFDC9Q8NEX5 89 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 LINC00308Q8TCZ7 52 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 GAFA1Q96PS6 74 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 PCDH15Q96QU1 1955 aa1.99□□□□□ -2.09
SPARCL1-208ENST00000535835 SCN3AQ9NY46 2000 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 TRGV2A0A075B6R0 118 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 NDUFA4O00483 81 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 PRB2P02812 416 aaPredicted RBP1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 TLX1NBP0CAT3 122 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 DEFA4P12838 97 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 CCL3L1P16619 93 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 NDPQ00604 133 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 DEFB113Q30KQ7 82 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 C9orf163Q8N9P6 203 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 FDCSPQ8NFU4 85 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 ZNF831Q5JPB2 1677 aa1.98□□□□□ -2.09
SPARCL1-208ENST00000535835 SPTBP11277 2137 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 LTBP1Q14766 1721 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 COL11A1P12107 1806 aaPredicted RBP1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 NCR3O14931 201 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 TFF1P04155 84 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 CRIP1P50238 77 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 MUC4Q99102 2169 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 MYO16Q9Y6X6 1858 aa1.97□□□□□ -2.09
SPARCL1-208ENST00000535835 DSCAMO60469 2012 aa1.96□□□□□ -2.09
SPARCL1-208ENST00000535835 PLXNB1O43157 2135 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 PLXNB3Q9ULL4 1909 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 IGKV3-7A0A075B6H7 116 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 A0A1B0GU33 70 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 ZNF861PO60384 105 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 MRPL33O75394 65 aaKnown RBP1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 IGKV4-1P06312 121 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 POLR2KP53803 58 aaKnown RBP1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 SPINK7P58062 85 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 COX17Q14061 63 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 DEFB132Q7Z7B7 95 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 ANAPC11Q9NYG5 84 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 TET1Q8NFU7 2136 aa1.96□□□□□ -2.1
SPARCL1-208ENST00000535835 PRRC2BQ5JSZ5 2229 aaKnown RBP1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 MYOFQ9NZM1 2061 aa1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 PLXNA2O75051 1894 aa1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 CCL22O00626 93 aa1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 IGLV7-43P04211 117 aa1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 C9orf129Q5T035 196 aaKnown RBP1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 COA5Q86WW8 74 aa1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 TNRC6CQ9HCJ0 1690 aaKnown RBP1.95□□□□□ -2.1
SPARCL1-208ENST00000535835 KIAA0100Q14667 2235 aaKnown RBP1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 CABIN1Q9Y6J0 2220 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 NACAE9PAV3 2078 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 MPDZO75970 2070 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 LCTP09848 1927 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 DEFB131BA0A096LNP1 70 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 GIG44P09565 113 aaPredicted RBP1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 PRCDQ00LT1 54 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 DEFB112Q30KQ8 113 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 MUC22E2RYF6 1773 aaPredicted RBP1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 BRWD3Q6RI45 1802 aa1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 TNRC6BQ9UPQ9 1833 aaKnown RBP1.94□□□□□ -2.1
SPARCL1-208ENST00000535835 COL4A1P02462 1669 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 FREM3P0C091 2139 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 H3BSH0 61 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 COX7BP24311 80 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 SMIM11BQ8TCY0 68 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 PLXNB2O15031 1838 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 PI4KAP42356 2102 aa1.93□□□□□ -2.1
SPARCL1-208ENST00000535835 HEATR5BQ9P2D3 2071 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 IGLV4-60A0A075B6I1 120 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 IGKV3OR2-268A0A0C4DH90 116 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 RPS27P42677 84 aaKnown RBP1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 PIGYQ3MUY2 71 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 Q6ZTI0 123 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 C16orf74Q96GX8 76 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 RNF5Q99942 180 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 KLK12Q9UKR0 248 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 MINOS1-NBL1R4GNA1 71 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 SHROOM3Q8TF72 1996 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 MED12Q93074 2177 aa1.92□□□□□ -2.1
SPARCL1-208ENST00000535835 TRBV6-4A0A1B0GX49 114 aa1.91□□□□□ -2.1
SPARCL1-208ENST00000535835 RNASE3P12724 160 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms