RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 PPP1R17O96001 155 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 PMVKQ15126 192 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 FAM19A5Q7Z5A7 132 aaPredicted RBP5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 NRACQ8N912 160 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 NTN5Q8WTR8 489 aaPredicted RBP5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 C11orf21Q9P2W6 132 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 DNAH5Q8TE73 4624 aa5.82□□□□□ -1.48
SFSWAP-202ENST00000535202 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 IGHV3-73A0A0B4J1V6 119 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 A4D1N5 150 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 SMKR1H3BMG3 65 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 CDK2AP2O75956 126 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 TMEM258P61165 79 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 HERVK_113P63121 156 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 SDIM1Q6ZPB5 146 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 LINC00643Q86TS7 51 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 WFDC10BQ8IUB3 73 aa5.81□□□□□ -1.48
SFSWAP-202ENST00000535202 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 M0R381 172 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 CRYGDP07320 174 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 COX7CP15954 63 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 GATA1P15976 413 aaPredicted RBP5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 ZNF876PQ49A33 203 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 C9orf85Q96MD7 179 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 SCGB3A1Q96QR1 104 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
SFSWAP-202ENST00000535202 F8WDY8 70 aa5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 ATOX1O00244 68 aa5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 RS1O15537 224 aa5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 FUSP35637 526 aaKnown RBP eCLIP5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 TMEM141Q96I45 108 aa5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 MSRB1Q9NZV6 116 aa5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 ABCA13Q86UQ4 5058 aa5.79□□□□□ -1.48
SFSWAP-202ENST00000535202 TMSB15BA0A087X1C1 80 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 SDHAF1A6NFY7 115 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 COX6CP09669 75 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 DNAH10OSP0CZ25 163 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 RNASE3P12724 160 aaKnown RBP5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 HIST1H4AP62805 103 aaKnown RBP5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 RHOHQ15669 191 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 GAGE2AQ6NT46 116 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 C5orf38Q86SI9 138 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 CHCHD5Q9BSY4 110 aa5.78□□□□□ -1.48
SFSWAP-202ENST00000535202 A0A087WTM6 91 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 IGKV3D-20A0A0C4DH25 116 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 IGHV3-38A0A0C4DH36 116 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 TRBV6-4A0A1B0GX49 114 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 NDUFC2-KCTD14E9PQ53 114 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 TIRAPP58753 221 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 ZNF56Q15929 161 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 PLEKHB2Q96CS7 222 aa5.77□□□□□ -1.49
SFSWAP-202ENST00000535202 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
SFSWAP-202ENST00000535202 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
SFSWAP-202ENST00000535202 DAND5Q8N907 189 aa5.76□□□□□ -1.49
SFSWAP-202ENST00000535202 TEX49A0A1B0GTD5 131 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 PSCAO43653 123 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 TRACP01848 142 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 IGHV3-30-3P0DP02 117 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 SUMO2P61956 95 aaKnown RBP5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 LINC01556Q5JQF7 62 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 LELP1Q5T871 98 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 Q8N1X5 172 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 AMELXQ99217 191 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 TIMM17AQ99595 171 aa5.75□□□□□ -1.49
SFSWAP-202ENST00000535202 H7C423 109 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 LST1O00453 97 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 LEPROTO15243 131 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 Q6ZSN1 163 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 C2orf48Q96LS8 159 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 JPT2Q9H910 190 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 Q9HAA7 133 aa5.74□□□□□ -1.49
SFSWAP-202ENST00000535202 IGLV4-69A0A075B6H9 119 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 LOC107984640A0A0U1RRK4 108 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 TMEM223A0PJW6 202 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 IBA57-AS1B1ANH7 110 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 J3QQQ9 107 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 LGALS3P17931 250 aaKnown RBP5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 PIK3CD-AS1Q5SR53 167 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 C2orf66Q6UXQ4 117 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 DPH3Q96FX2 82 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 PHLDA3Q9Y5J5 127 aa5.73□□□□□ -1.49
SFSWAP-202ENST00000535202 A0A087WWL8 130 aa5.72□□□□□ -1.49
SFSWAP-202ENST00000535202 GAS8-AS1O95177 125 aa5.72□□□□□ -1.49
SFSWAP-202ENST00000535202 KRTAP10-1P60331 282 aa5.72□□□□□ -1.49
SFSWAP-202ENST00000535202 Q8N3U1 123 aa5.72□□□□□ -1.49
SFSWAP-202ENST00000535202 Q9UF83 564 aa5.72□□□□□ -1.49
SFSWAP-202ENST00000535202 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
SFSWAP-202ENST00000535202 IGLV5-52A0A0A0MRZ9 124 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 LRCOL1A6NCL2 159 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 IGIPA6NJ69 53 aa5.71□□□□□ -1.5
SFSWAP-202ENST00000535202 TRIAP1O43715 76 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms