RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 TOMM7Q9P0U1 55 aa13.65□□□□□ -0.22
TNFRSF1A-205ENST00000534885 SPCS1Q9Y6A9 102 aa13.65□□□□□ -0.22
TNFRSF1A-205ENST00000534885 FABP2P12104 132 aa13.65□□□□□ -0.22
TNFRSF1A-205ENST00000534885 UBE2DNLQ8IWF7 75 aa13.64□□□□□ -0.23
TNFRSF1A-205ENST00000534885 COX7B2Q8TF08 81 aa13.64□□□□□ -0.23
TNFRSF1A-205ENST00000534885 A0A0J9YXY3 114 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 A0A1B0GV72 72 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 NDUFA1O15239 70 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 MALP21145 153 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 KRTAP26-1Q6PEX3 210 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 Q9HAA7 133 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 LINC01561Q8N1V8 128 aa13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 NHP2Q9NX24 153 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-205ENST00000534885 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
TNFRSF1A-205ENST00000534885 K7ERJ3 54 aa13.61□□□□□ -0.23
TNFRSF1A-205ENST00000534885 ZNF625Q96I27 306 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-205ENST00000534885 IBA57-AS1B1ANH7 110 aa13.6□□□□□ -0.23
TNFRSF1A-205ENST00000534885 C1orf43Q9BWL3 253 aa13.6□□□□□ -0.23
TNFRSF1A-205ENST00000534885 IGKV2D-24A0A075B6R9 120 aa13.59□□□□□ -0.23
TNFRSF1A-205ENST00000534885 MUC7Q8TAX7 377 aa13.59□□□□□ -0.23
TNFRSF1A-205ENST00000534885 HIST1H4GQ99525 98 aa13.59□□□□□ -0.23
TNFRSF1A-205ENST00000534885 KRTAP1-5Q9BYS1 174 aa13.57□□□□□ -0.24
TNFRSF1A-205ENST00000534885 C6orf226Q5I0X4 101 aa13.57□□□□□ -0.24
TNFRSF1A-205ENST00000534885 Q8IZM0 81 aa13.57□□□□□ -0.24
TNFRSF1A-205ENST00000534885 LITAFQ99732 161 aa13.57□□□□□ -0.24
TNFRSF1A-205ENST00000534885 KIAA0087Q14695 138 aa13.56□□□□□ -0.24
TNFRSF1A-205ENST00000534885 PRSS2P07478 247 aa13.55□□□□□ -0.24
TNFRSF1A-205ENST00000534885 SRSF9Q13242 221 aaKnown RBP eCLIP13.55□□□□□ -0.24
TNFRSF1A-205ENST00000534885 SPANXB1Q9NS25 103 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-205ENST00000534885 ADAMTSL4-AS1Q5T5F5 129 aa13.54□□□□□ -0.24
TNFRSF1A-205ENST00000534885 C2orf82Q6UX34 121 aa13.54□□□□□ -0.24
TNFRSF1A-205ENST00000534885 APOMO95445 188 aa13.54□□□□□ -0.24
TNFRSF1A-205ENST00000534885 WWC2-AS2Q96NR7 200 aa13.54□□□□□ -0.24
TNFRSF1A-205ENST00000534885 HERV-K104P63124 156 aa13.53□□□□□ -0.24
TNFRSF1A-205ENST00000534885 LINC00526Q96FQ7 95 aa13.53□□□□□ -0.24
TNFRSF1A-205ENST00000534885 A0A0U1RRA0 63 aa13.52□□□□□ -0.25
TNFRSF1A-205ENST00000534885 SPAG11BQ08648 103 aa13.52□□□□□ -0.25
TNFRSF1A-205ENST00000534885 A0A1B0GWB2 263 aa13.51□□□□□ -0.25
TNFRSF1A-205ENST00000534885 DAND5Q8N907 189 aa13.51□□□□□ -0.25
TNFRSF1A-205ENST00000534885 VPS13DQ5THJ4 4388 aa13.51□□□□□ -0.25
TNFRSF1A-205ENST00000534885 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
TNFRSF1A-205ENST00000534885 C6orf223Q8N319 242 aa13.51□□□□□ -0.25
TNFRSF1A-205ENST00000534885 CKS1BP61024 79 aa13.5□□□□□ -0.25
TNFRSF1A-205ENST00000534885 TIMM17BO60830 172 aa13.49□□□□□ -0.25
TNFRSF1A-205ENST00000534885 C15orf56Q8N910 161 aa13.49□□□□□ -0.25
TNFRSF1A-205ENST00000534885 CASC10Q5T4H9 136 aa13.49□□□□□ -0.25
TNFRSF1A-205ENST00000534885 HIGD2BQ4VC39 106 aa13.48□□□□□ -0.25
TNFRSF1A-205ENST00000534885 CIRBPQ14011 172 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-205ENST00000534885 SFTA2Q6UW10 78 aa13.48□□□□□ -0.25
TNFRSF1A-205ENST00000534885 SPANXDQ9BXN6 97 aa13.48□□□□□ -0.25
TNFRSF1A-205ENST00000534885 SPANXCQ9NY87 97 aa13.48□□□□□ -0.25
TNFRSF1A-205ENST00000534885 CXCL5P42830 114 aa13.47□□□□□ -0.25
TNFRSF1A-205ENST00000534885 NPC2P61916 151 aa13.47□□□□□ -0.25
TNFRSF1A-205ENST00000534885 RMI2Q96E14 147 aa13.47□□□□□ -0.25
TNFRSF1A-205ENST00000534885 MUSTN1Q8IVN3 82 aa13.46□□□□□ -0.25
TNFRSF1A-205ENST00000534885 NBDYA0A0U1RRE5 68 aa13.45□□□□□ -0.26
TNFRSF1A-205ENST00000534885 F8W1H4 67 aa13.45□□□□□ -0.26
TNFRSF1A-205ENST00000534885 EIF4EBP3O60516 100 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-205ENST00000534885 C10orf25Q5T742 122 aa13.45□□□□□ -0.26
TNFRSF1A-205ENST00000534885 DNAH10Q8IVF4 4471 aa13.45□□□□□ -0.26
TNFRSF1A-205ENST00000534885 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-205ENST00000534885 UNQ6190/PRO20217Q6UXQ8 127 aa13.44□□□□□ -0.26
TNFRSF1A-205ENST00000534885 PFN2P35080 140 aa13.44□□□□□ -0.26
TNFRSF1A-205ENST00000534885 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-205ENST00000534885 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
TNFRSF1A-205ENST00000534885 ZNF561-AS1K7EIQ3 104 aa13.43□□□□□ -0.26
TNFRSF1A-205ENST00000534885 MTURNQ8N3F0 131 aa13.43□□□□□ -0.26
TNFRSF1A-205ENST00000534885 LINC00158P58513 81 aa13.43□□□□□ -0.26
TNFRSF1A-205ENST00000534885 C9orf116Q5BN46 136 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-205ENST00000534885 TTC32Q5I0X7 151 aa13.43□□□□□ -0.26
TNFRSF1A-205ENST00000534885 MIR7-3HGQ8N6C7 128 aa13.42□□□□□ -0.26
TNFRSF1A-205ENST00000534885 H3BMG7 143 aa13.41□□□□□ -0.26
TNFRSF1A-205ENST00000534885 SIGMAR1Q99720 223 aa13.41□□□□□ -0.26
TNFRSF1A-205ENST00000534885 GVQW2A0A096LPI5 108 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-205ENST00000534885 WFDC2Q14508 124 aa13.41□□□□□ -0.26
TNFRSF1A-205ENST00000534885 A4D1N5 150 aa13.4□□□□□ -0.26
TNFRSF1A-205ENST00000534885 USP17L23D6RBM5 183 aa13.4□□□□□ -0.26
TNFRSF1A-205ENST00000534885 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
TNFRSF1A-205ENST00000534885 LINC00308Q8TCZ7 52 aa13.4□□□□□ -0.26
TNFRSF1A-205ENST00000534885 LECT2O14960 151 aa13.4□□□□□ -0.27
TNFRSF1A-205ENST00000534885 PGPEP1Q9NXJ5 209 aa13.4□□□□□ -0.27
TNFRSF1A-205ENST00000534885 KMT2AQ03164 3969 aa13.39□□□□□ -0.27
TNFRSF1A-205ENST00000534885 M0R2N4 97 aa13.39□□□□□ -0.27
TNFRSF1A-205ENST00000534885 CAMK2N2Q96S95 79 aa13.38□□□□□ -0.27
TNFRSF1A-205ENST00000534885 IFITM1P13164 125 aa13.38□□□□□ -0.27
TNFRSF1A-205ENST00000534885 C6orf48Q9UBA6 75 aa13.38□□□□□ -0.27
TNFRSF1A-205ENST00000534885 C2orf48Q96LS8 159 aa13.36□□□□□ -0.27
TNFRSF1A-205ENST00000534885 PRO0461Q9UI25 63 aa13.36□□□□□ -0.27
TNFRSF1A-205ENST00000534885 CFC1BP0CG36 223 aa13.36□□□□□ -0.27
TNFRSF1A-205ENST00000534885 CFC1P0CG37 223 aa13.36□□□□□ -0.27
TNFRSF1A-205ENST00000534885 Q6ZRU5 148 aa13.36□□□□□ -0.27
TNFRSF1A-205ENST00000534885 PSCAO43653 123 aa13.35□□□□□ -0.27
TNFRSF1A-205ENST00000534885 C3orf84H3BNL1 204 aa13.35□□□□□ -0.27
TNFRSF1A-205ENST00000534885 COX17Q14061 63 aa13.35□□□□□ -0.27
TNFRSF1A-205ENST00000534885 TSPAN13O95857 204 aa13.34□□□□□ -0.27
TNFRSF1A-205ENST00000534885 LY6G6CO95867 125 aa13.34□□□□□ -0.27
TNFRSF1A-205ENST00000534885 J3QR89 54 aa13.33□□□□□ -0.28
TNFRSF1A-205ENST00000534885 SLPIP03973 132 aa13.32□□□□□ -0.28
TNFRSF1A-205ENST00000534885 ETDBQ3ZM63 59 aa13.32□□□□□ -0.28
TNFRSF1A-205ENST00000534885 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 480.4 ms