RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
USF1-211ENST00000534633 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
USF1-211ENST00000534633 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
USF1-211ENST00000534633 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
USF1-211ENST00000534633 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
USF1-211ENST00000534633 IGLV5-45A0A087WSX0 123 aa7.83□□□□□ -1.16
USF1-211ENST00000534633 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
USF1-211ENST00000534633 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
USF1-211ENST00000534633 LINC01561Q8N1V8 128 aa7.83□□□□□ -1.16
USF1-211ENST00000534633 OR10D4PQ8NGN7 298 aa7.83□□□□□ -1.16
USF1-211ENST00000534633 HSBP1O75506 76 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 APOMO95445 188 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 HERVK_113P63121 156 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 SPAG11BQ08648 103 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 SYCNQ0VAF6 134 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 C2orf48Q96LS8 159 aa7.82□□□□□ -1.16
USF1-211ENST00000534633 ATP5LO75964 103 aa7.81□□□□□ -1.16
USF1-211ENST00000534633 SEC11AP67812 179 aa7.81□□□□□ -1.16
USF1-211ENST00000534633 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
USF1-211ENST00000534633 REG3GQ6UW15 175 aa7.81□□□□□ -1.16
USF1-211ENST00000534633 CARD19Q96LW7 228 aa7.81□□□□□ -1.16
USF1-211ENST00000534633 IGLC3P0DOY3 106 aa7.8□□□□□ -1.16
USF1-211ENST00000534633 NDUFA6P56556 154 aa7.8□□□□□ -1.16
USF1-211ENST00000534633 LRP2P98164 4655 aa7.8□□□□□ -1.16
USF1-211ENST00000534633 IFI27L1Q96BM0 104 aa7.8□□□□□ -1.16
USF1-211ENST00000534633 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
USF1-211ENST00000534633 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
USF1-211ENST00000534633 C2orf82Q6UX34 121 aa7.79□□□□□ -1.16
USF1-211ENST00000534633 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
USF1-211ENST00000534633 LINC00469Q8N7U9 141 aa7.79□□□□□ -1.16
USF1-211ENST00000534633 CAMK2N2Q96S95 79 aa7.79□□□□□ -1.16
USF1-211ENST00000534633 SMIM1B2RUZ4 78 aa7.78□□□□□ -1.16
USF1-211ENST00000534633 Q6ZRP5 223 aa7.78□□□□□ -1.16
USF1-211ENST00000534633 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
USF1-211ENST00000534633 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
USF1-211ENST00000534633 SPINK8P0C7L1 97 aa7.77□□□□□ -1.17
USF1-211ENST00000534633 ZNF22P17026 224 aaPredicted RBP7.77□□□□□ -1.17
USF1-211ENST00000534633 SRSF9Q13242 221 aaKnown RBP eCLIP7.77□□□□□ -1.17
USF1-211ENST00000534633 ODF1Q14990 250 aa7.77□□□□□ -1.17
USF1-211ENST00000534633 RNF151Q2KHN1 245 aa7.77□□□□□ -1.17
USF1-211ENST00000534633 MRPL35Q9NZE8 188 aaKnown RBP7.77□□□□□ -1.17
USF1-211ENST00000534633 C6orf48Q9UBA6 75 aa7.77□□□□□ -1.17
USF1-211ENST00000534633 F8WDY8 70 aa7.76□□□□□ -1.17
USF1-211ENST00000534633 LEPROTL1O95214 131 aa7.76□□□□□ -1.17
USF1-211ENST00000534633 FABP4P15090 132 aa7.76□□□□□ -1.17
USF1-211ENST00000534633 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
USF1-211ENST00000534633 Q8IZM0 81 aa7.76□□□□□ -1.17
USF1-211ENST00000534633 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
USF1-211ENST00000534633 LOC107984640A0A0U1RRK4 108 aa7.75□□□□□ -1.17
USF1-211ENST00000534633 NDUFA1O15239 70 aa7.75□□□□□ -1.17
USF1-211ENST00000534633 PTTG1IPP53801 180 aa7.75□□□□□ -1.17
USF1-211ENST00000534633 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
USF1-211ENST00000534633 IGLV5-39A0A0G2JS06 123 aa7.74□□□□□ -1.17
USF1-211ENST00000534633 C9orf116Q5BN46 136 aaPredicted RBP7.74□□□□□ -1.17
USF1-211ENST00000534633 C6orf226Q5I0X4 101 aa7.74□□□□□ -1.17
USF1-211ENST00000534633 F8VRH5 84 aa7.73□□□□□ -1.17
USF1-211ENST00000534633 GAGE2BQ13066 116 aa7.73□□□□□ -1.17
USF1-211ENST00000534633 PACRGQ96M98 296 aaPredicted RBP7.73□□□□□ -1.17
USF1-211ENST00000534633 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
USF1-211ENST00000534633 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
USF1-211ENST00000534633 HSPB8Q9UJY1 196 aa7.72□□□□□ -1.17
USF1-211ENST00000534633 TRBV30A0A0K0K1B3 111 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 A0A1W2PNN7 141 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 H0Y8G0 127 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 H3BRM9 83 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 PRSS2P07478 247 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 CKS1BP61024 79 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
USF1-211ENST00000534633 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
USF1-211ENST00000534633 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
USF1-211ENST00000534633 RPL18AQ02543 176 aaKnown RBP7.69□□□□□ -1.18
USF1-211ENST00000534633 KRTAP7-1Q8IUC3 87 aa7.69□□□□□ -1.18
USF1-211ENST00000534633 PSORS1C2Q9UIG4 136 aa7.69□□□□□ -1.18
USF1-211ENST00000534633 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
USF1-211ENST00000534633 SYS1-DBNDD2H3BUS1 97 aa7.68□□□□□ -1.18
USF1-211ENST00000534633 FAM168BA1KXE4 195 aa7.67□□□□□ -1.18
USF1-211ENST00000534633 CXCL5P42830 114 aa7.67□□□□□ -1.18
USF1-211ENST00000534633 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
USF1-211ENST00000534633 C9orf129Q5T035 196 aaKnown RBP7.67□□□□□ -1.18
USF1-211ENST00000534633 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
USF1-211ENST00000534633 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
USF1-211ENST00000534633 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
USF1-211ENST00000534633 C1orf137Q5JT78 98 aa7.66□□□□□ -1.18
USF1-211ENST00000534633 ZNF625Q96I27 306 aaPredicted RBP7.66□□□□□ -1.18
USF1-211ENST00000534633 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
USF1-211ENST00000534633 DPM2O94777 84 aa7.65□□□□□ -1.18
USF1-211ENST00000534633 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.18
USF1-211ENST00000534633 IGKCP01834 107 aa7.64□□□□□ -1.19
USF1-211ENST00000534633 PLNP26678 52 aa7.64□□□□□ -1.19
USF1-211ENST00000534633 TSPEAR-AS2P59090 65 aa7.64□□□□□ -1.19
USF1-211ENST00000534633 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
USF1-211ENST00000534633 HIST3H2BBQ8N257 126 aa7.64□□□□□ -1.19
USF1-211ENST00000534633 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
USF1-211ENST00000534633 DIRC1Q969H9 104 aa7.63□□□□□ -1.19
USF1-211ENST00000534633 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
USF1-211ENST00000534633 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
USF1-211ENST00000534633 KRTAP11-1Q8IUC1 163 aa7.62□□□□□ -1.19
USF1-211ENST00000534633 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms