RNA–Protein interactions for RNA: ENST00000534479.5

DKK3-215, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 1,087 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-215ENST00000534479 C2orf82Q6UX34 121 aa12.8□□□□□ -0.36
DKK3-215ENST00000534479 CKS1BP61024 79 aa12.79□□□□□ -0.36
DKK3-215ENST00000534479 DNAH5Q8TE73 4624 aa12.78□□□□□ -0.36
DKK3-215ENST00000534479 C20orf202A1L168 122 aa12.78□□□□□ -0.36
DKK3-215ENST00000534479 UNQ6190/PRO20217Q6UXQ8 127 aa12.78□□□□□ -0.36
DKK3-215ENST00000534479 CXCL5P42830 114 aa12.77□□□□□ -0.37
DKK3-215ENST00000534479 C10orf25Q5T742 122 aa12.77□□□□□ -0.37
DKK3-215ENST00000534479 HERVK_113P61574 105 aa12.75□□□□□ -0.37
DKK3-215ENST00000534479 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
DKK3-215ENST00000534479 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
DKK3-215ENST00000534479 SDIM1Q6ZPB5 146 aa12.74□□□□□ -0.37
DKK3-215ENST00000534479 C6orf48Q9UBA6 75 aa12.74□□□□□ -0.37
DKK3-215ENST00000534479 PKIGQ9Y2B9 76 aa12.74□□□□□ -0.37
DKK3-215ENST00000534479 DYNC1H1Q14204 4646 aaKnown RBP12.73□□□□□ -0.37
DKK3-215ENST00000534479 LOC107984640A0A0U1RRK4 108 aa12.71□□□□□ -0.37
DKK3-215ENST00000534479 PKHD1P08F94 4074 aa12.71□□□□□ -0.38
DKK3-215ENST00000534479 LEPROTO15243 131 aa12.7□□□□□ -0.38
DKK3-215ENST00000534479 AKR1D1P51857 326 aa12.7□□□□□ -0.38
DKK3-215ENST00000534479 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
DKK3-215ENST00000534479 C9orf116Q5BN46 136 aaPredicted RBP12.69□□□□□ -0.38
DKK3-215ENST00000534479 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
DKK3-215ENST00000534479 PLEKHB2Q96CS7 222 aa12.69□□□□□ -0.38
DKK3-215ENST00000534479 FAM30AQ9NZY2 134 aa12.69□□□□□ -0.38
DKK3-215ENST00000534479 SFTA2Q6UW10 78 aa12.68□□□□□ -0.38
DKK3-215ENST00000534479 Q6ZSA8 131 aa12.68□□□□□ -0.38
DKK3-215ENST00000534479 ATOH7Q8N100 152 aa12.68□□□□□ -0.38
DKK3-215ENST00000534479 A0A096LNI7 61 aa12.67□□□□□ -0.38
DKK3-215ENST00000534479 IGKV2-24A0A0C4DH68 120 aa12.67□□□□□ -0.38
DKK3-215ENST00000534479 GAGE2BQ13066 116 aa12.67□□□□□ -0.38
DKK3-215ENST00000534479 STPG4Q8N801 248 aa12.67□□□□□ -0.38
DKK3-215ENST00000534479 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.67□□□□□ -0.38
DKK3-215ENST00000534479 E9PLD3 99 aa12.66□□□□□ -0.38
DKK3-215ENST00000534479 J3QQQ9 107 aa12.66□□□□□ -0.38
DKK3-215ENST00000534479 TLX1NBP0CAT3 122 aa12.66□□□□□ -0.38
DKK3-215ENST00000534479 CHTF8P0CG12 524 aa12.66□□□□□ -0.38
DKK3-215ENST00000534479 SCGB1D1O95968 90 aa12.65□□□□□ -0.38
DKK3-215ENST00000534479 LGALS3P17931 250 aaKnown RBP12.65□□□□□ -0.38
DKK3-215ENST00000534479 TSPEAR-AS2P59090 65 aa12.65□□□□□ -0.38
DKK3-215ENST00000534479 ZNF625Q96I27 306 aaPredicted RBP12.65□□□□□ -0.38
DKK3-215ENST00000534479 NDUFA12Q9UI09 145 aa12.65□□□□□ -0.38
DKK3-215ENST00000534479 LRP1BQ9NZR2 4599 aa12.64□□□□□ -0.39
DKK3-215ENST00000534479 NDUFC2-KCTD14E9PQ53 114 aa12.64□□□□□ -0.39
DKK3-215ENST00000534479 PANO1I0J062 215 aa12.64□□□□□ -0.39
DKK3-215ENST00000534479 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
DKK3-215ENST00000534479 MAJINQ3KP22 176 aa12.64□□□□□ -0.39
DKK3-215ENST00000534479 DPH3Q96FX2 82 aa12.64□□□□□ -0.39
DKK3-215ENST00000534479 CDK2AP2O75956 126 aa12.63□□□□□ -0.39
DKK3-215ENST00000534479 CIRBPQ14011 172 aaKnown RBP12.63□□□□□ -0.39
DKK3-215ENST00000534479 Q6ZRP5 223 aa12.63□□□□□ -0.39
DKK3-215ENST00000534479 SPACA4Q8TDM5 124 aa12.63□□□□□ -0.39
DKK3-215ENST00000534479 LINC00474Q9P2X8 69 aa12.63□□□□□ -0.39
DKK3-215ENST00000534479 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
DKK3-215ENST00000534479 HAMPP81172 84 aa12.62□□□□□ -0.39
DKK3-215ENST00000534479 GAGE2EQ4V326 116 aa12.62□□□□□ -0.39
DKK3-215ENST00000534479 GAGE2DQ9UEU5 116 aa12.62□□□□□ -0.39
DKK3-215ENST00000534479 NMUP48645 174 aa12.61□□□□□ -0.39
DKK3-215ENST00000534479 XGP55808 180 aa12.61□□□□□ -0.39
DKK3-215ENST00000534479 HERV-K104P63124 156 aa12.61□□□□□ -0.39
DKK3-215ENST00000534479 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
DKK3-215ENST00000534479 PFN2P35080 140 aa12.6□□□□□ -0.39
DKK3-215ENST00000534479 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
DKK3-215ENST00000534479 IGKV2D-26A0A0A0MRZ7 120 aa12.59□□□□□ -0.39
DKK3-215ENST00000534479 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
DKK3-215ENST00000534479 SCXQ7RTU7 201 aa12.59□□□□□ -0.39
DKK3-215ENST00000534479 HSBP1L1C9JCN9 74 aa12.58□□□□□ -0.4
DKK3-215ENST00000534479 COX17Q14061 63 aa12.58□□□□□ -0.4
DKK3-215ENST00000534479 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.4
DKK3-215ENST00000534479 CIRBP-AS1Q8TBR5 109 aa12.58□□□□□ -0.4
DKK3-215ENST00000534479 A0A087WYN8 130 aa12.57□□□□□ -0.4
DKK3-215ENST00000534479 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
DKK3-215ENST00000534479 LINC00587B1AMM8 73 aa12.55□□□□□ -0.4
DKK3-215ENST00000534479 LINC00158P58513 81 aa12.55□□□□□ -0.4
DKK3-215ENST00000534479 A0A0U1RRA0 63 aa12.54□□□□□ -0.4
DKK3-215ENST00000534479 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
DKK3-215ENST00000534479 C9orf129Q5T035 196 aaKnown RBP12.54□□□□□ -0.4
DKK3-215ENST00000534479 XAGE1AQ9HD64 81 aa12.54□□□□□ -0.4
DKK3-215ENST00000534479 PLAC8Q9NZF1 115 aa12.54□□□□□ -0.4
DKK3-215ENST00000534479 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
DKK3-215ENST00000534479 APOBP04114 4563 aaKnown RBP12.53□□□□□ -0.4
DKK3-215ENST00000534479 TTTY13Q9BZ97 58 aa12.52□□□□□ -0.41
DKK3-215ENST00000534479 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
DKK3-215ENST00000534479 A0A1W2PNN7 141 aa12.51□□□□□ -0.41
DKK3-215ENST00000534479 FAM168BA1KXE4 195 aa12.5□□□□□ -0.41
DKK3-215ENST00000534479 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
DKK3-215ENST00000534479 FAM19A5Q7Z5A7 132 aaPredicted RBP12.49□□□□□ -0.41
DKK3-215ENST00000534479 SMR3BP02814 79 aaPredicted RBP12.48□□□□□ -0.41
DKK3-215ENST00000534479 PYY3Q5JQD4 70 aa12.48□□□□□ -0.41
DKK3-215ENST00000534479 PCP2Q8IVA1 136 aa12.48□□□□□ -0.41
DKK3-215ENST00000534479 MIR7-3HGQ8N6C7 128 aa12.48□□□□□ -0.41
DKK3-215ENST00000534479 HERC2O95714 4834 aa12.47□□□□□ -0.41
DKK3-215ENST00000534479 VAMP8Q9BV40 100 aa12.46□□□□□ -0.41
DKK3-215ENST00000534479 EPM2AB3EWF7 344 aa12.45□□□□□ -0.42
DKK3-215ENST00000534479 SCGB1D4Q6XE38 83 aa12.45□□□□□ -0.42
DKK3-215ENST00000534479 KIAA1109Q2LD37 5005 aa12.44□□□□□ -0.42
DKK3-215ENST00000534479 SERTAD4-AS1Q5TG53 156 aa12.44□□□□□ -0.42
DKK3-215ENST00000534479 KRTAP7-1Q8IUC3 87 aa12.44□□□□□ -0.42
DKK3-215ENST00000534479 DAND5Q8N907 189 aa12.44□□□□□ -0.42
DKK3-215ENST00000534479 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
DKK3-215ENST00000534479 PAM16Q9Y3D7 125 aa12.44□□□□□ -0.42
DKK3-215ENST00000534479 RYR1P21817 5038 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms