RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 A0A1W2PNN7 141 aa9.96□□□□□ -0.82
PAX6-230ENST00000534390 HBDP02042 147 aa9.96□□□□□ -0.82
PAX6-230ENST00000534390 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
PAX6-230ENST00000534390 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
PAX6-230ENST00000534390 YPEL4Q96NS1 127 aa9.96□□□□□ -0.82
PAX6-230ENST00000534390 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
PAX6-230ENST00000534390 Q6ZRP5 223 aa9.95□□□□□ -0.82
PAX6-230ENST00000534390 Q8IZM0 81 aa9.95□□□□□ -0.82
PAX6-230ENST00000534390 A0A096LNJ9 63 aa9.94□□□□□ -0.82
PAX6-230ENST00000534390 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
PAX6-230ENST00000534390 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
PAX6-230ENST00000534390 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
PAX6-230ENST00000534390 FAM168BA1KXE4 195 aa9.92□□□□□ -0.82
PAX6-230ENST00000534390 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
PAX6-230ENST00000534390 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
PAX6-230ENST00000534390 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
PAX6-230ENST00000534390 H3BRM9 83 aa9.91□□□□□ -0.82
PAX6-230ENST00000534390 ATP5LO75964 103 aa9.91□□□□□ -0.82
PAX6-230ENST00000534390 PHF5AQ7RTV0 110 aaKnown RBP9.91□□□□□ -0.82
PAX6-230ENST00000534390 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
PAX6-230ENST00000534390 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
PAX6-230ENST00000534390 F8VRH5 84 aa9.9□□□□□ -0.82
PAX6-230ENST00000534390 OXTP01178 125 aa9.9□□□□□ -0.82
PAX6-230ENST00000534390 PDZD11Q5EBL8 140 aa9.9□□□□□ -0.82
PAX6-230ENST00000534390 BAGE3Q86Y29 109 aa9.9□□□□□ -0.82
PAX6-230ENST00000534390 CXCL5P42830 114 aa9.89□□□□□ -0.83
PAX6-230ENST00000534390 CHCHD1Q96BP2 118 aaKnown RBP9.89□□□□□ -0.83
PAX6-230ENST00000534390 TRGC2P03986 189 aa9.88□□□□□ -0.83
PAX6-230ENST00000534390 IGLC3P0DOY3 106 aa9.88□□□□□ -0.83
PAX6-230ENST00000534390 PKHD1L1Q86WI1 4243 aa9.88□□□□□ -0.83
PAX6-230ENST00000534390 M0QXV9 152 aa9.86□□□□□ -0.83
PAX6-230ENST00000534390 HSBP1O75506 76 aa9.86□□□□□ -0.83
PAX6-230ENST00000534390 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
PAX6-230ENST00000534390 XAGE1AQ9HD64 81 aa9.86□□□□□ -0.83
PAX6-230ENST00000534390 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
PAX6-230ENST00000534390 UBE2BP63146 152 aa9.85□□□□□ -0.83
PAX6-230ENST00000534390 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
PAX6-230ENST00000534390 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
PAX6-230ENST00000534390 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
PAX6-230ENST00000534390 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
PAX6-230ENST00000534390 HERC1Q15751 4861 aa9.85□□□□□ -0.83
PAX6-230ENST00000534390 C11orf86A6NJI1 115 aa9.84□□□□□ -0.83
PAX6-230ENST00000534390 IFI27L1Q96BM0 104 aa9.84□□□□□ -0.83
PAX6-230ENST00000534390 CHTOPQ9Y3Y2 248 aaKnown RBP9.84□□□□□ -0.83
PAX6-230ENST00000534390 H0Y8G0 127 aa9.83□□□□□ -0.84
PAX6-230ENST00000534390 LRP1Q07954 4544 aaKnown RBP9.82□□□□□ -0.84
PAX6-230ENST00000534390 SERF1AO75920 110 aa9.81□□□□□ -0.84
PAX6-230ENST00000534390 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
PAX6-230ENST00000534390 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
PAX6-230ENST00000534390 COLCA2A8K830 154 aa9.8□□□□□ -0.84
PAX6-230ENST00000534390 SCO1O75880 301 aa9.8□□□□□ -0.84
PAX6-230ENST00000534390 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
PAX6-230ENST00000534390 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
PAX6-230ENST00000534390 FAT3Q8TDW7 4589 aa9.79□□□□□ -0.84
PAX6-230ENST00000534390 PFN2P35080 140 aa9.79□□□□□ -0.84
PAX6-230ENST00000534390 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
PAX6-230ENST00000534390 KRTAP11-1Q8IUC1 163 aa9.79□□□□□ -0.84
PAX6-230ENST00000534390 TRAV12-1A0A0B4J245 112 aa9.78□□□□□ -0.84
PAX6-230ENST00000534390 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
PAX6-230ENST00000534390 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
PAX6-230ENST00000534390 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
PAX6-230ENST00000534390 LINC00310P59036 64 aa9.76□□□□□ -0.85
PAX6-230ENST00000534390 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
PAX6-230ENST00000534390 FABP4P15090 132 aa9.75□□□□□ -0.85
PAX6-230ENST00000534390 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
PAX6-230ENST00000534390 LBHQ53QV2 105 aaPredicted RBP9.75□□□□□ -0.85
PAX6-230ENST00000534390 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
PAX6-230ENST00000534390 MT1HL1P0DM35 61 aa9.74□□□□□ -0.85
PAX6-230ENST00000534390 HSPB8Q9UJY1 196 aa9.74□□□□□ -0.85
PAX6-230ENST00000534390 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
PAX6-230ENST00000534390 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
PAX6-230ENST00000534390 NUPR1O60356 82 aa9.73□□□□□ -0.85
PAX6-230ENST00000534390 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
PAX6-230ENST00000534390 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
PAX6-230ENST00000534390 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
PAX6-230ENST00000534390 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
PAX6-230ENST00000534390 LINC01600Q96MT4 127 aa9.72□□□□□ -0.85
PAX6-230ENST00000534390 RPL37AP8A6NKH3 93 aa9.71□□□□□ -0.86
PAX6-230ENST00000534390 ODF1Q14990 250 aa9.71□□□□□ -0.86
PAX6-230ENST00000534390 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
PAX6-230ENST00000534390 LINC00158P58513 81 aa9.7□□□□□ -0.86
PAX6-230ENST00000534390 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
PAX6-230ENST00000534390 TP73-AS1Q9UF72 201 aa9.7□□□□□ -0.86
PAX6-230ENST00000534390 COX17Q14061 63 aa9.69□□□□□ -0.86
PAX6-230ENST00000534390 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
PAX6-230ENST00000534390 PLNP26678 52 aa9.68□□□□□ -0.86
PAX6-230ENST00000534390 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
PAX6-230ENST00000534390 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
PAX6-230ENST00000534390 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
PAX6-230ENST00000534390 H0Y9J4 135 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 ATP6V1G1O75348 118 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms