RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 C10orf25Q5T742 122 aa11.91□□□□□ -0.5
PACS1-215ENST00000534273 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
PACS1-215ENST00000534273 PACRGQ96M98 296 aaPredicted RBP11.91□□□□□ -0.5
PACS1-215ENST00000534273 HERC1Q15751 4861 aa11.91□□□□□ -0.5
PACS1-215ENST00000534273 LINC00310P59036 64 aa11.9□□□□□ -0.5
PACS1-215ENST00000534273 UNQ6190/PRO20217Q6UXQ8 127 aa11.9□□□□□ -0.5
PACS1-215ENST00000534273 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
PACS1-215ENST00000534273 LINC01549A6NIU2 74 aa11.89□□□□□ -0.51
PACS1-215ENST00000534273 SERF1AO75920 110 aa11.89□□□□□ -0.51
PACS1-215ENST00000534273 J3QL48 77 aa11.88□□□□□ -0.51
PACS1-215ENST00000534273 S100A2P29034 98 aa11.88□□□□□ -0.51
PACS1-215ENST00000534273 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
PACS1-215ENST00000534273 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
PACS1-215ENST00000534273 C6orf48Q9UBA6 75 aa11.88□□□□□ -0.51
PACS1-215ENST00000534273 NUPR1O60356 82 aa11.87□□□□□ -0.51
PACS1-215ENST00000534273 HERVK_113P63121 156 aa11.87□□□□□ -0.51
PACS1-215ENST00000534273 SEC11AP67812 179 aa11.87□□□□□ -0.51
PACS1-215ENST00000534273 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
PACS1-215ENST00000534273 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
PACS1-215ENST00000534273 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
PACS1-215ENST00000534273 CDKN2A-AS1Q9UH64 79 aa11.86□□□□□ -0.51
PACS1-215ENST00000534273 OXTP01178 125 aa11.85□□□□□ -0.51
PACS1-215ENST00000534273 LINC00614P0C842 121 aa11.85□□□□□ -0.51
PACS1-215ENST00000534273 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
PACS1-215ENST00000534273 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
PACS1-215ENST00000534273 URB1-AS1Q96HZ7 61 aa11.85□□□□□ -0.51
PACS1-215ENST00000534273 CST9LQ9H4G1 147 aa11.85□□□□□ -0.51
PACS1-215ENST00000534273 LRP1Q07954 4544 aaKnown RBP11.85□□□□□ -0.51
PACS1-215ENST00000534273 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
PACS1-215ENST00000534273 PRR3P79522 188 aaKnown RBP11.83□□□□□ -0.52
PACS1-215ENST00000534273 C9orf116Q5BN46 136 aaPredicted RBP11.83□□□□□ -0.52
PACS1-215ENST00000534273 A0A096LNJ9 63 aa11.82□□□□□ -0.52
PACS1-215ENST00000534273 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
PACS1-215ENST00000534273 PRSS2P07478 247 aa11.82□□□□□ -0.52
PACS1-215ENST00000534273 FABP4P15090 132 aa11.82□□□□□ -0.52
PACS1-215ENST00000534273 PDZD11Q5EBL8 140 aa11.82□□□□□ -0.52
PACS1-215ENST00000534273 Q6ZRP5 223 aa11.82□□□□□ -0.52
PACS1-215ENST00000534273 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
PACS1-215ENST00000534273 HSBP1O75506 76 aa11.81□□□□□ -0.52
PACS1-215ENST00000534273 PMVKQ15126 192 aa11.81□□□□□ -0.52
PACS1-215ENST00000534273 Q8IZM0 81 aa11.81□□□□□ -0.52
PACS1-215ENST00000534273 LINC00469Q8N7U9 141 aa11.81□□□□□ -0.52
PACS1-215ENST00000534273 TOMM7Q9P0U1 55 aa11.81□□□□□ -0.52
PACS1-215ENST00000534273 IGLV5-45A0A087WSX0 123 aa11.8□□□□□ -0.52
PACS1-215ENST00000534273 AKR1D1P51857 326 aa11.8□□□□□ -0.52
PACS1-215ENST00000534273 C6orf226Q5I0X4 101 aa11.8□□□□□ -0.52
PACS1-215ENST00000534273 CKS1BP61024 79 aa11.79□□□□□ -0.52
PACS1-215ENST00000534273 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
PACS1-215ENST00000534273 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
PACS1-215ENST00000534273 HBDP02042 147 aa11.78□□□□□ -0.52
PACS1-215ENST00000534273 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.53
PACS1-215ENST00000534273 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.53
PACS1-215ENST00000534273 PMCHL1Q16048 86 aa11.77□□□□□ -0.53
PACS1-215ENST00000534273 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
PACS1-215ENST00000534273 PHF5AQ7RTV0 110 aaKnown RBP11.75□□□□□ -0.53
PACS1-215ENST00000534273 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
PACS1-215ENST00000534273 SMIM6P0DI80 62 aa11.74□□□□□ -0.53
PACS1-215ENST00000534273 F8VRH5 84 aa11.73□□□□□ -0.53
PACS1-215ENST00000534273 SPINK8P0C7L1 97 aa11.73□□□□□ -0.53
PACS1-215ENST00000534273 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
PACS1-215ENST00000534273 JOSD1Q15040 202 aaPredicted RBP11.73□□□□□ -0.53
PACS1-215ENST00000534273 C9orf129Q5T035 196 aaKnown RBP11.73□□□□□ -0.53
PACS1-215ENST00000534273 KRTAP7-1Q8IUC3 87 aa11.73□□□□□ -0.53
PACS1-215ENST00000534273 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
PACS1-215ENST00000534273 ATP5LO75964 103 aa11.72□□□□□ -0.53
PACS1-215ENST00000534273 CXCL5P42830 114 aa11.72□□□□□ -0.53
PACS1-215ENST00000534273 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
PACS1-215ENST00000534273 H3BRM9 83 aa11.71□□□□□ -0.53
PACS1-215ENST00000534273 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
PACS1-215ENST00000534273 LINC00518Q8N0U6 118 aa11.71□□□□□ -0.53
PACS1-215ENST00000534273 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.53
PACS1-215ENST00000534273 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
PACS1-215ENST00000534273 PYY3Q5JQD4 70 aa11.7□□□□□ -0.54
PACS1-215ENST00000534273 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
PACS1-215ENST00000534273 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
PACS1-215ENST00000534273 MT1HL1P0DM35 61 aa11.69□□□□□ -0.54
PACS1-215ENST00000534273 IGLV5-39A0A0G2JS06 123 aa11.67□□□□□ -0.54
PACS1-215ENST00000534273 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
PACS1-215ENST00000534273 KRTAP11-1Q8IUC1 163 aa11.67□□□□□ -0.54
PACS1-215ENST00000534273 M0QXV9 152 aa11.66□□□□□ -0.54
PACS1-215ENST00000534273 C3orf79P0CE67 100 aa11.66□□□□□ -0.54
PACS1-215ENST00000534273 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
PACS1-215ENST00000534273 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
PACS1-215ENST00000534273 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
PACS1-215ENST00000534273 C12orf57Q99622 126 aa11.65□□□□□ -0.54
PACS1-215ENST00000534273 KRTDAPP60985 99 aa11.64□□□□□ -0.55
PACS1-215ENST00000534273 SERTAD4-AS1Q5TG53 156 aa11.64□□□□□ -0.55
PACS1-215ENST00000534273 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
PACS1-215ENST00000534273 PET117Q6UWS5 81 aa11.63□□□□□ -0.55
PACS1-215ENST00000534273 IFI27L1Q96BM0 104 aa11.63□□□□□ -0.55
PACS1-215ENST00000534273 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
PACS1-215ENST00000534273 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
PACS1-215ENST00000534273 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
PACS1-215ENST00000534273 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
PACS1-215ENST00000534273 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
PACS1-215ENST00000534273 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
PACS1-215ENST00000534273 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
PACS1-215ENST00000534273 UBE2BP63146 152 aa11.6□□□□□ -0.55
PACS1-215ENST00000534273 ODF1Q14990 250 aa11.6□□□□□ -0.55
PACS1-215ENST00000534273 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms