RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
UBXN1-217ENST00000534176 CST9LQ9H4G1 147 aa9.64□□□□□ -0.87
UBXN1-217ENST00000534176 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
UBXN1-217ENST00000534176 CDKN2A-AS1Q9UH64 79 aa9.64□□□□□ -0.87
UBXN1-217ENST00000534176 IGLV5-45A0A087WSX0 123 aa9.63□□□□□ -0.87
UBXN1-217ENST00000534176 F8VRH5 84 aa9.63□□□□□ -0.87
UBXN1-217ENST00000534176 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
UBXN1-217ENST00000534176 REG3GQ6UW15 175 aa9.63□□□□□ -0.87
UBXN1-217ENST00000534176 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
UBXN1-217ENST00000534176 HBDP02042 147 aa9.62□□□□□ -0.87
UBXN1-217ENST00000534176 ZC2HC1BQ5TFG8 222 aa9.62□□□□□ -0.87
UBXN1-217ENST00000534176 C18orf32Q8TCD1 76 aa9.62□□□□□ -0.87
UBXN1-217ENST00000534176 ATP5LO75964 103 aa9.61□□□□□ -0.87
UBXN1-217ENST00000534176 HERC1Q15751 4861 aa9.6□□□□□ -0.87
UBXN1-217ENST00000534176 GAGE2EQ4V326 116 aa9.6□□□□□ -0.87
UBXN1-217ENST00000534176 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
UBXN1-217ENST00000534176 GAGE2DQ9UEU5 116 aa9.6□□□□□ -0.87
UBXN1-217ENST00000534176 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
UBXN1-217ENST00000534176 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
UBXN1-217ENST00000534176 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
UBXN1-217ENST00000534176 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
UBXN1-217ENST00000534176 IGLC3P0DOY3 106 aa9.57□□□□□ -0.88
UBXN1-217ENST00000534176 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
UBXN1-217ENST00000534176 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
UBXN1-217ENST00000534176 LINC01600Q96MT4 127 aa9.56□□□□□ -0.88
UBXN1-217ENST00000534176 M0QXV9 152 aa9.55□□□□□ -0.88
UBXN1-217ENST00000534176 LBHQ53QV2 105 aaPredicted RBP9.55□□□□□ -0.88
UBXN1-217ENST00000534176 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
UBXN1-217ENST00000534176 FAM19A5Q7Z5A7 132 aaPredicted RBP9.55□□□□□ -0.88
UBXN1-217ENST00000534176 YPEL4Q96NS1 127 aa9.55□□□□□ -0.88
UBXN1-217ENST00000534176 A0A096LNJ9 63 aa9.54□□□□□ -0.88
UBXN1-217ENST00000534176 NDUFA6P56556 154 aa9.54□□□□□ -0.88
UBXN1-217ENST00000534176 UBE2BP63146 152 aa9.54□□□□□ -0.88
UBXN1-217ENST00000534176 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
UBXN1-217ENST00000534176 PKHD1L1Q86WI1 4243 aa9.54□□□□□ -0.88
UBXN1-217ENST00000534176 URB1-AS1Q96HZ7 61 aa9.53□□□□□ -0.88
UBXN1-217ENST00000534176 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
UBXN1-217ENST00000534176 LRP1Q07954 4544 aaKnown RBP9.53□□□□□ -0.88
UBXN1-217ENST00000534176 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
UBXN1-217ENST00000534176 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
UBXN1-217ENST00000534176 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
UBXN1-217ENST00000534176 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
UBXN1-217ENST00000534176 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
UBXN1-217ENST00000534176 SPINK8P0C7L1 97 aa9.51□□□□□ -0.89
UBXN1-217ENST00000534176 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
UBXN1-217ENST00000534176 COX17Q14061 63 aa9.51□□□□□ -0.89
UBXN1-217ENST00000534176 BAGE3Q86Y29 109 aa9.51□□□□□ -0.89
UBXN1-217ENST00000534176 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
UBXN1-217ENST00000534176 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
UBXN1-217ENST00000534176 NUPR1O60356 82 aa9.5□□□□□ -0.89
UBXN1-217ENST00000534176 PLA2G2DQ9UNK4 145 aa9.5□□□□□ -0.89
UBXN1-217ENST00000534176 HSBP1O75506 76 aa9.49□□□□□ -0.89
UBXN1-217ENST00000534176 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
UBXN1-217ENST00000534176 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
UBXN1-217ENST00000534176 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
UBXN1-217ENST00000534176 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
UBXN1-217ENST00000534176 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
UBXN1-217ENST00000534176 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
UBXN1-217ENST00000534176 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
UBXN1-217ENST00000534176 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
UBXN1-217ENST00000534176 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
UBXN1-217ENST00000534176 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.9
UBXN1-217ENST00000534176 IGLV5-37A0A075B6J1 123 aa9.44□□□□□ -0.9
UBXN1-217ENST00000534176 C11orf86A6NJI1 115 aa9.44□□□□□ -0.9
UBXN1-217ENST00000534176 H0Y9J4 135 aa9.44□□□□□ -0.9
UBXN1-217ENST00000534176 TRGC2P03986 189 aa9.44□□□□□ -0.9
UBXN1-217ENST00000534176 NKAPP1Q8N9T2 125 aa9.44□□□□□ -0.9
UBXN1-217ENST00000534176 LINC00587B1AMM8 73 aa9.43□□□□□ -0.9
UBXN1-217ENST00000534176 KRTAP10-8P60410 259 aa9.43□□□□□ -0.9
UBXN1-217ENST00000534176 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
UBXN1-217ENST00000534176 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
UBXN1-217ENST00000534176 HSPB8Q9UJY1 196 aa9.42□□□□□ -0.9
UBXN1-217ENST00000534176 ZNF861PO60384 105 aa9.41□□□□□ -0.9
UBXN1-217ENST00000534176 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
UBXN1-217ENST00000534176 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
UBXN1-217ENST00000534176 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
UBXN1-217ENST00000534176 PFN2P35080 140 aa9.4□□□□□ -0.9
UBXN1-217ENST00000534176 RPL28P46779 137 aaKnown RBP9.4□□□□□ -0.9
UBXN1-217ENST00000534176 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
UBXN1-217ENST00000534176 PLNP26678 52 aa9.39□□□□□ -0.91
UBXN1-217ENST00000534176 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
UBXN1-217ENST00000534176 HERV-K104P63124 156 aa9.39□□□□□ -0.91
UBXN1-217ENST00000534176 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
UBXN1-217ENST00000534176 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
UBXN1-217ENST00000534176 BCE1O60756 84 aa9.38□□□□□ -0.91
UBXN1-217ENST00000534176 FAM19A2Q8N3H0 131 aa9.38□□□□□ -0.91
UBXN1-217ENST00000534176 COLCA2A8K830 154 aa9.37□□□□□ -0.91
UBXN1-217ENST00000534176 SERF1AO75920 110 aa9.37□□□□□ -0.91
UBXN1-217ENST00000534176 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
UBXN1-217ENST00000534176 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
UBXN1-217ENST00000534176 ATP6V1G1O75348 118 aa9.36□□□□□ -0.91
UBXN1-217ENST00000534176 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
UBXN1-217ENST00000534176 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
UBXN1-217ENST00000534176 MYMXA0A1B0GTQ4 84 aa9.34□□□□□ -0.91
UBXN1-217ENST00000534176 LINC00158P58513 81 aa9.34□□□□□ -0.91
UBXN1-217ENST00000534176 HERVK_113P61574 105 aa9.34□□□□□ -0.91
UBXN1-217ENST00000534176 TNXBP22105 4242 aa9.33□□□□□ -0.92
UBXN1-217ENST00000534176 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
UBXN1-217ENST00000534176 VPREB1P12018 145 aa9.32□□□□□ -0.92
UBXN1-217ENST00000534176 PLEKHB2Q96CS7 222 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms