RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 C2orf66Q6UXQ4 117 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 Q6ZN92 141 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 PRSS47A8MTI9 375 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 LINC00242Q5T6M2 205 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 C10orf25Q5T742 122 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 UNQ6190/PRO20217Q6UXQ8 127 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 Q6ZRP5 223 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 SNHG12Q9BXW3 62 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
CAPN1-225ENST00000533704 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
CAPN1-225ENST00000533704 MT1HL1P0DM35 61 aa6.49□□□□□ -1.37
CAPN1-225ENST00000533704 ANKRD39Q53RE8 183 aa6.49□□□□□ -1.37
CAPN1-225ENST00000533704 IMMP2LQ96T52 175 aa6.49□□□□□ -1.37
CAPN1-225ENST00000533704 VCX2Q9H322 139 aa6.49□□□□□ -1.37
CAPN1-225ENST00000533704 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
CAPN1-225ENST00000533704 A0A087WZ39 114 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 F8WDY8 70 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 PCP4P48539 62 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 UBE2D1P51668 147 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 GAGE2EQ4V326 116 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
CAPN1-225ENST00000533704 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
CAPN1-225ENST00000533704 TOMM7Q9P0U1 55 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 C6orf48Q9UBA6 75 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 GAGE2DQ9UEU5 116 aa6.48□□□□□ -1.37
CAPN1-225ENST00000533704 MT-ND6P03923 174 aa6.47□□□□□ -1.37
CAPN1-225ENST00000533704 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
CAPN1-225ENST00000533704 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
CAPN1-225ENST00000533704 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
CAPN1-225ENST00000533704 FAM168BA1KXE4 195 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 K7EMI3 77 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 PRSS2P07478 247 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 COL5A1-AS1Q5SY13 56 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 REG3GQ6UW15 175 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 AMELXQ99217 191 aa6.46□□□□□ -1.38
CAPN1-225ENST00000533704 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 PAPPA-AS1Q5QFB9 102 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 MIEN1Q9BRT3 115 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 GEMIN7Q9H840 131 aaKnown RBP6.45□□□□□ -1.38
CAPN1-225ENST00000533704 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
CAPN1-225ENST00000533704 TRBV30A0A0K0K1B3 111 aa6.44□□□□□ -1.38
CAPN1-225ENST00000533704 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
CAPN1-225ENST00000533704 CKS1BP61024 79 aa6.44□□□□□ -1.38
CAPN1-225ENST00000533704 LINC01600Q96MT4 127 aa6.44□□□□□ -1.38
CAPN1-225ENST00000533704 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
CAPN1-225ENST00000533704 NPSP0C0P6 89 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 HERVK_113P63121 156 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 SRSF9Q13242 221 aaKnown RBP eCLIP6.43□□□□□ -1.38
CAPN1-225ENST00000533704 ODF1Q14990 250 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 C6orf226Q5I0X4 101 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 LINC01561Q8N1V8 128 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 TOMM6Q96B49 74 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 TIMM17AQ99595 171 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 ALKBH7Q9BT30 221 aaPredicted RBP6.43□□□□□ -1.38
CAPN1-225ENST00000533704 GNB1LQ9BYB4 327 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
CAPN1-225ENST00000533704 NDUFC2-KCTD14E9PQ53 114 aa6.42□□□□□ -1.38
CAPN1-225ENST00000533704 SEC11AP67812 179 aa6.42□□□□□ -1.38
CAPN1-225ENST00000533704 FA2HQ7L5A8 372 aa6.42□□□□□ -1.38
CAPN1-225ENST00000533704 ERASQ7Z444 233 aa6.42□□□□□ -1.38
CAPN1-225ENST00000533704 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
CAPN1-225ENST00000533704 M0QXV9 152 aa6.41□□□□□ -1.38
CAPN1-225ENST00000533704 UBE2BP63146 152 aa6.41□□□□□ -1.38
CAPN1-225ENST00000533704 BATFQ16520 125 aa6.41□□□□□ -1.38
CAPN1-225ENST00000533704 COX19Q49B96 90 aa6.41□□□□□ -1.38
CAPN1-225ENST00000533704 Q8IZM0 81 aa6.41□□□□□ -1.38
CAPN1-225ENST00000533704 C20orf202A1L168 122 aa6.4□□□□□ -1.38
CAPN1-225ENST00000533704 C9orf129Q5T035 196 aaKnown RBP6.4□□□□□ -1.38
CAPN1-225ENST00000533704 FAM19A3Q7Z5A8 133 aa6.4□□□□□ -1.38
CAPN1-225ENST00000533704 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.38
CAPN1-225ENST00000533704 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
CAPN1-225ENST00000533704 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
CAPN1-225ENST00000533704 KRTAP7-1Q8IUC3 87 aa6.39□□□□□ -1.39
CAPN1-225ENST00000533704 XAGE1AQ9HD64 81 aa6.39□□□□□ -1.39
CAPN1-225ENST00000533704 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
CAPN1-225ENST00000533704 DIRC1Q969H9 104 aa6.38□□□□□ -1.39
CAPN1-225ENST00000533704 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
CAPN1-225ENST00000533704 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 TINCRA0A1B0GVN0 87 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 SMIM1B2RUZ4 78 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 F8VRH5 84 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 PMVKQ15126 192 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 BAGE3Q86Y29 109 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 PAM16Q9Y3D7 125 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms