RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 C10orf126Q8N4M7 172 aa8.97□□□□□ -0.97
TRAPPC4-214ENST00000533632 TRAV8-4A0A0B4J246 113 aa8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 A0A0J9YXY3 114 aa8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 TIMM17BO60830 172 aa8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 HERV-K104P63124 156 aa8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 Q6ZVH6 145 aa8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 Q9HAA7 133 aa8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.97
TRAPPC4-214ENST00000533632 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
TRAPPC4-214ENST00000533632 K7EP13 123 aa8.96□□□□□ -0.98
TRAPPC4-214ENST00000533632 XCL1P47992 114 aa8.96□□□□□ -0.98
TRAPPC4-214ENST00000533632 PTTG1IPP53801 180 aa8.96□□□□□ -0.98
TRAPPC4-214ENST00000533632 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
TRAPPC4-214ENST00000533632 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC4-214ENST00000533632 CRPP02741 224 aa8.95□□□□□ -0.98
TRAPPC4-214ENST00000533632 CIRBPQ14011 172 aaKnown RBP8.95□□□□□ -0.98
TRAPPC4-214ENST00000533632 COX7A2LO14548 114 aa8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 C5orf38Q86SI9 138 aa8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 COX7B2Q8TF08 81 aa8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 RTL8CO15255 209 aa8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 MIAQ16674 131 aa8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 KRTAP26-1Q6PEX3 210 aa8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC4-214ENST00000533632 PKD1P98161 4303 aa8.93□□□□□ -0.98
TRAPPC4-214ENST00000533632 DNAH11Q96DT5 4516 aa8.93□□□□□ -0.98
TRAPPC4-214ENST00000533632 FXYD2P54710 66 aa8.93□□□□□ -0.98
TRAPPC4-214ENST00000533632 Q6ZRN7 208 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC4-214ENST00000533632 SPANXDQ9BXN6 97 aa8.92□□□□□ -0.98
TRAPPC4-214ENST00000533632 SPANXCQ9NY87 97 aa8.92□□□□□ -0.98
TRAPPC4-214ENST00000533632 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
TRAPPC4-214ENST00000533632 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 Q8IZM0 81 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 LITAFQ99732 161 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 IGKV2D-24A0A075B6R9 120 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 APOMO95445 188 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 PRSS2P07478 247 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 MALP21145 153 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 RPL24P83731 157 aaKnown RBP8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 FOXI1Q12951 378 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 COPS9Q8WXC6 57 aa8.91□□□□□ -0.98
TRAPPC4-214ENST00000533632 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 TAX1BP3O14907 124 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 IFITM1P13164 125 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 C1orf43Q9BWL3 253 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 TOMM7Q9P0U1 55 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 COX11Q9Y6N1 276 aa8.9□□□□□ -0.98
TRAPPC4-214ENST00000533632 CXCL5P42830 114 aa8.89□□□□□ -0.99
TRAPPC4-214ENST00000533632 C6orf223Q8N319 242 aa8.89□□□□□ -0.99
TRAPPC4-214ENST00000533632 NHP2Q9NX24 153 aaKnown RBP8.89□□□□□ -0.99
TRAPPC4-214ENST00000533632 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
TRAPPC4-214ENST00000533632 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
TRAPPC4-214ENST00000533632 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
TRAPPC4-214ENST00000533632 PKHD1P08F94 4074 aa8.87□□□□□ -0.99
TRAPPC4-214ENST00000533632 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 MEIG1Q5JSS6 88 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 C9orf118A6NHY6 69 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 CKS1BP61024 79 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 WFDC2Q14508 124 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 RMI2Q96E14 147 aa8.86□□□□□ -0.99
TRAPPC4-214ENST00000533632 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
TRAPPC4-214ENST00000533632 A0A1B0GVY2 172 aa8.84□□□□□ -1
TRAPPC4-214ENST00000533632 A4D1N5 150 aa8.84□□□□□ -1
TRAPPC4-214ENST00000533632 A0A0B4J2C4 111 aa8.83□□□□□ -1
TRAPPC4-214ENST00000533632 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
TRAPPC4-214ENST00000533632 LECT2O14960 151 aa8.83□□□□□ -1
TRAPPC4-214ENST00000533632 TNP2Q05952 138 aa8.83□□□□□ -1
TRAPPC4-214ENST00000533632 LINC00336Q6ZUF6 198 aa8.83□□□□□ -1
TRAPPC4-214ENST00000533632 RAB37Q96AX2 223 aa8.83□□□□□ -1
TRAPPC4-214ENST00000533632 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
TRAPPC4-214ENST00000533632 DNAH5Q8TE73 4624 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 K7ERJ3 54 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 PSCAO43653 123 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 CFC1BP0CG36 223 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 CFC1P0CG37 223 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 COX17Q14061 63 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 C15orf56Q8N910 161 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
TRAPPC4-214ENST00000533632 SPAG11BQ08648 103 aa8.81□□□□□ -1
TRAPPC4-214ENST00000533632 ERG28Q9UKR5 140 aa8.81□□□□□ -1
TRAPPC4-214ENST00000533632 USP17L23D6RBM5 183 aa8.81□□□□□ -1
TRAPPC4-214ENST00000533632 F8WDY8 70 aa8.81□□□□□ -1
TRAPPC4-214ENST00000533632 LINC00158P58513 81 aa8.81□□□□□ -1
TRAPPC4-214ENST00000533632 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
TRAPPC4-214ENST00000533632 H3BUT2 72 aa8.8□□□□□ -1
TRAPPC4-214ENST00000533632 VAMP3Q15836 100 aa8.79□□□□□ -1
TRAPPC4-214ENST00000533632 C2orf82Q6UX34 121 aa8.79□□□□□ -1
TRAPPC4-214ENST00000533632 MIR7-3HGQ8N6C7 128 aa8.79□□□□□ -1
TRAPPC4-214ENST00000533632 DAND5Q8N907 189 aa8.79□□□□□ -1
TRAPPC4-214ENST00000533632 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
TRAPPC4-214ENST00000533632 A0A0U1RRA0 63 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 BIRC6Q9NR09 4857 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 A0A087WTM6 91 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 A0A1W2PPM0 123 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 ZNF561-AS1K7EIQ3 104 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 FABP2P12104 132 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 HIGD2BQ4VC39 106 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms