RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
NUP98-220ENST00000533346 A0A1W2PNN7 141 aa6.14□□□□□ -1.43
NUP98-220ENST00000533346 HBDP02042 147 aa6.14□□□□□ -1.43
NUP98-220ENST00000533346 CXCL5P42830 114 aa6.14□□□□□ -1.43
NUP98-220ENST00000533346 HNRNPA3P51991 378 aaKnown RBP6.14□□□□□ -1.43
NUP98-220ENST00000533346 GAGE2BQ13066 116 aa6.14□□□□□ -1.43
NUP98-220ENST00000533346 Q6ZRP5 223 aa6.14□□□□□ -1.43
NUP98-220ENST00000533346 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
NUP98-220ENST00000533346 NDUFC2-KCTD14E9PQ53 114 aa6.13□□□□□ -1.43
NUP98-220ENST00000533346 CHCHD1Q96BP2 118 aaKnown RBP6.13□□□□□ -1.43
NUP98-220ENST00000533346 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
NUP98-220ENST00000533346 ATP5LO75964 103 aa6.12□□□□□ -1.43
NUP98-220ENST00000533346 PRSS2P07478 247 aa6.12□□□□□ -1.43
NUP98-220ENST00000533346 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
NUP98-220ENST00000533346 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
NUP98-220ENST00000533346 C9orf116Q5BN46 136 aaPredicted RBP6.12□□□□□ -1.43
NUP98-220ENST00000533346 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
NUP98-220ENST00000533346 PACRGQ96M98 296 aaPredicted RBP6.12□□□□□ -1.43
NUP98-220ENST00000533346 RPL18AQ02543 176 aaKnown RBP6.11□□□□□ -1.43
NUP98-220ENST00000533346 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
NUP98-220ENST00000533346 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
NUP98-220ENST00000533346 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
NUP98-220ENST00000533346 F8VRH5 84 aa6.1□□□□□ -1.43
NUP98-220ENST00000533346 CKS1BP61024 79 aa6.1□□□□□ -1.43
NUP98-220ENST00000533346 SPINK6Q6UWN8 80 aa6.1□□□□□ -1.43
NUP98-220ENST00000533346 LINC00469Q8N7U9 141 aa6.1□□□□□ -1.43
NUP98-220ENST00000533346 TRAV12-1A0A0B4J245 112 aa6.09□□□□□ -1.43
NUP98-220ENST00000533346 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
NUP98-220ENST00000533346 H3BRM9 83 aa6.09□□□□□ -1.43
NUP98-220ENST00000533346 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
NUP98-220ENST00000533346 CBLN2Q8IUK8 224 aa6.09□□□□□ -1.43
NUP98-220ENST00000533346 COLCA2A8K830 154 aa6.08□□□□□ -1.44
NUP98-220ENST00000533346 J3QL48 77 aa6.08□□□□□ -1.44
NUP98-220ENST00000533346 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
NUP98-220ENST00000533346 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
NUP98-220ENST00000533346 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
NUP98-220ENST00000533346 TRGC2P03986 189 aa6.07□□□□□ -1.44
NUP98-220ENST00000533346 ZNF22P17026 224 aaPredicted RBP6.07□□□□□ -1.44
NUP98-220ENST00000533346 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
NUP98-220ENST00000533346 PMCHL1Q16048 86 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 SFTA2Q6UW10 78 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 PHF5AQ7RTV0 110 aaKnown RBP6.06□□□□□ -1.44
NUP98-220ENST00000533346 BAGE3Q86Y29 109 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 TP73-AS1Q9UF72 201 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
NUP98-220ENST00000533346 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
NUP98-220ENST00000533346 HSBP1O75506 76 aa6.05□□□□□ -1.44
NUP98-220ENST00000533346 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
NUP98-220ENST00000533346 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
NUP98-220ENST00000533346 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
NUP98-220ENST00000533346 LINC01600Q96MT4 127 aa6.05□□□□□ -1.44
NUP98-220ENST00000533346 TNXBP22105 4242 aa6.04□□□□□ -1.44
NUP98-220ENST00000533346 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
NUP98-220ENST00000533346 LINC00310P59036 64 aa6.04□□□□□ -1.44
NUP98-220ENST00000533346 COX17Q14061 63 aa6.04□□□□□ -1.44
NUP98-220ENST00000533346 CHTOPQ9Y3Y2 248 aaKnown RBP6.04□□□□□ -1.44
NUP98-220ENST00000533346 IGLV5-37A0A075B6J1 123 aa6.03□□□□□ -1.44
NUP98-220ENST00000533346 NDUFA6P56556 154 aa6.03□□□□□ -1.44
NUP98-220ENST00000533346 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
NUP98-220ENST00000533346 TMEM223A0PJW6 202 aa6.02□□□□□ -1.45
NUP98-220ENST00000533346 M0QXV9 152 aa6.02□□□□□ -1.45
NUP98-220ENST00000533346 IGLV7-43P04211 117 aa6.02□□□□□ -1.45
NUP98-220ENST00000533346 LBHQ53QV2 105 aaPredicted RBP6.02□□□□□ -1.45
NUP98-220ENST00000533346 REG3GQ6UW15 175 aa6.02□□□□□ -1.45
NUP98-220ENST00000533346 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
NUP98-220ENST00000533346 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
NUP98-220ENST00000533346 C22orf24Q9Y442 160 aa6.02□□□□□ -1.45
NUP98-220ENST00000533346 NUPR1O60356 82 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 SERF1AO75920 110 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 LEPROTL1O95214 131 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 C1orf137Q5JT78 98 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 FAM19A2Q8N3H0 131 aa6.01□□□□□ -1.45
NUP98-220ENST00000533346 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
NUP98-220ENST00000533346 RNF213Q63HN8 5207 aa6□□□□□ -1.45
NUP98-220ENST00000533346 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
NUP98-220ENST00000533346 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
NUP98-220ENST00000533346 HSPB8Q9UJY1 196 aa5.99□□□□□ -1.45
NUP98-220ENST00000533346 ERG28Q9UKR5 140 aa5.99□□□□□ -1.45
NUP98-220ENST00000533346 S100A1P23297 94 aa5.98□□□□□ -1.45
NUP98-220ENST00000533346 UBE2BP63146 152 aa5.98□□□□□ -1.45
NUP98-220ENST00000533346 DIRC1Q969H9 104 aa5.98□□□□□ -1.45
NUP98-220ENST00000533346 LINC00587B1AMM8 73 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 H0Y9J4 135 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BKO60814 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BJP06899 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BOP23527 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BBP33778 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BDP58876 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BCP62807 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HERV-K104P63124 156 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST2H2BEQ16778 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BHQ93079 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BNQ99877 126 aa5.97□□□□□ -1.45
NUP98-220ENST00000533346 HIST1H2BMQ99879 126 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms