RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, human

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERGEF-223	ENST00000533328	IGLC3	P0DOY3	106 aa		13.27	□□□□□ -0.29
SERGEF-223	ENST00000533328	TRBV30	A0A0K0K1B3	111 aa		13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328		A0A1W2PNN7	141 aa		13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328	SCO1	O75880	301 aa		13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328	LINC00310	P59036	64 aa		13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328		Q6ZRP5	223 aa		13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328	PACRG	Q96M98	296 aa	Predicted RBP	13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328	TOMM7	Q9P0U1	55 aa		13.26	□□□□□ -0.29
SERGEF-223	ENST00000533328	RPL18A	Q02543	176 aa	Known RBP	13.25	□□□□□ -0.29
SERGEF-223	ENST00000533328	C6orf226	Q5I0X4	101 aa		13.25	□□□□□ -0.29
SERGEF-223	ENST00000533328	PRSS2	P07478	247 aa		13.24	□□□□□ -0.29
SERGEF-223	ENST00000533328	NDUFA6	P56556	154 aa		13.24	□□□□□ -0.29
SERGEF-223	ENST00000533328	BAGE3	Q86Y29	109 aa		13.24	□□□□□ -0.29
SERGEF-223	ENST00000533328	FAT3	Q8TDW7	4589 aa		13.23	□□□□□ -0.29
SERGEF-223	ENST00000533328	HNRNPA3	P51991	378 aa	Known RBP	13.23	□□□□□ -0.29
SERGEF-223	ENST00000533328	C9orf116	Q5BN46	136 aa	Predicted RBP	13.23	□□□□□ -0.29
SERGEF-223	ENST00000533328	LRP1	Q07954	4544 aa	Known RBP	13.22	□□□□□ -0.29
SERGEF-223	ENST00000533328	SPINK8	P0C7L1	97 aa		13.22	□□□□□ -0.29
SERGEF-223	ENST00000533328	CKS1B	P61024	79 aa		13.22	□□□□□ -0.29
SERGEF-223	ENST00000533328	FAM19A2	Q8N3H0	131 aa		13.22	□□□□□ -0.29
SERGEF-223	ENST00000533328	HSBP1	O75506	76 aa		13.21	□□□□□ -0.29
SERGEF-223	ENST00000533328	ZNF22	P17026	224 aa	Predicted RBP	13.21	□□□□□ -0.29
SERGEF-223	ENST00000533328	NDUFC2-KCTD14	E9PQ53	114 aa		13.2	□□□□□ -0.3
SERGEF-223	ENST00000533328	SERF1A	O75920	110 aa		13.2	□□□□□ -0.3
SERGEF-223	ENST00000533328	COX7B2	Q8TF08	81 aa		13.2	□□□□□ -0.3
SERGEF-223	ENST00000533328	C7orf33	Q8WU49	177 aa		13.2	□□□□□ -0.3
SERGEF-223	ENST00000533328	IFI27L1	Q96BM0	104 aa		13.2	□□□□□ -0.3
SERGEF-223	ENST00000533328	C11orf86	A6NJI1	115 aa		13.19	□□□□□ -0.3
SERGEF-223	ENST00000533328	NUPR1	O60356	82 aa		13.19	□□□□□ -0.3
SERGEF-223	ENST00000533328	TRAV12-1	A0A0B4J245	112 aa		13.18	□□□□□ -0.3
SERGEF-223	ENST00000533328	IGLV5-39	A0A0G2JS06	123 aa		13.18	□□□□□ -0.3
SERGEF-223	ENST00000533328		F8VRH5	84 aa		13.18	□□□□□ -0.3
SERGEF-223	ENST00000533328		H3BRM9	83 aa		13.18	□□□□□ -0.3
SERGEF-223	ENST00000533328	CXCL5	P42830	114 aa		13.18	□□□□□ -0.3
SERGEF-223	ENST00000533328	GAGE2E	Q4V326	116 aa		13.17	□□□□□ -0.3
SERGEF-223	ENST00000533328	KRTAP7-1	Q8IUC3	87 aa		13.17	□□□□□ -0.3
SERGEF-223	ENST00000533328	GAGE2D	Q9UEU5	116 aa		13.17	□□□□□ -0.3
SERGEF-223	ENST00000533328	FAM168B	A1KXE4	195 aa		13.16	□□□□□ -0.3
SERGEF-223	ENST00000533328	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.16	□□□□□ -0.3
SERGEF-223	ENST00000533328	C9orf129	Q5T035	196 aa	Known RBP	13.15	□□□□□ -0.3
SERGEF-223	ENST00000533328	PRR3	P79522	188 aa	Known RBP	13.14	□□□□□ -0.31
SERGEF-223	ENST00000533328	PHF5A	Q7RTV0	110 aa	Known RBP	13.12	□□□□□ -0.31
SERGEF-223	ENST00000533328	HERC1	Q15751	4861 aa		13.12	□□□□□ -0.31
SERGEF-223	ENST00000533328	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BK	O60814	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	LEPROTL1	O95214	131 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BJ	P06899	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BO	P23527	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BB	P33778	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BD	P58876	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BC	P62807	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST2H2BE	Q16778	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BH	Q93079	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BN	Q99877	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	HIST1H2BM	Q99879	126 aa		13.11	□□□□□ -0.31
SERGEF-223	ENST00000533328	TMEM170B	Q5T4T1	132 aa		13.1	□□□□□ -0.31
SERGEF-223	ENST00000533328	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.1	□□□□□ -0.31
SERGEF-223	ENST00000533328	ODF1	Q14990	250 aa		13.09	□□□□□ -0.31
SERGEF-223	ENST00000533328	TMEM223	A0PJW6	202 aa		13.08	□□□□□ -0.32
SERGEF-223	ENST00000533328	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.08	□□□□□ -0.32
SERGEF-223	ENST00000533328	KRTAP11-1	Q8IUC1	163 aa		13.07	□□□□□ -0.32
SERGEF-223	ENST00000533328	XAGE1A	Q9HD64	81 aa		13.07	□□□□□ -0.32
SERGEF-223	ENST00000533328	PSORS1C2	Q9UIG4	136 aa		13.06	□□□□□ -0.32
SERGEF-223	ENST00000533328	FABP4	P15090	132 aa		13.05	□□□□□ -0.32
SERGEF-223	ENST00000533328	SERTAD4-AS1	Q5TG53	156 aa		13.05	□□□□□ -0.32
SERGEF-223	ENST00000533328	HSPB8	Q9UJY1	196 aa		13.05	□□□□□ -0.32
SERGEF-223	ENST00000533328	OXT	P01178	125 aa		13.04	□□□□□ -0.32
SERGEF-223	ENST00000533328	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
SERGEF-223	ENST00000533328		M0QXV9	152 aa		13.03	□□□□□ -0.32
SERGEF-223	ENST00000533328	ZNF625	Q96I27	306 aa	Predicted RBP	13.03	□□□□□ -0.32
SERGEF-223	ENST00000533328		H0Y8G0	127 aa		13.02	□□□□□ -0.33
SERGEF-223	ENST00000533328	C22orf24	Q9Y442	160 aa		13	□□□□□ -0.33
SERGEF-223	ENST00000533328		J3QL48	77 aa		12.99	□□□□□ -0.33
SERGEF-223	ENST00000533328	S100A1	P23297	94 aa		12.99	□□□□□ -0.33
SERGEF-223	ENST00000533328	COA6	Q5JTJ3	125 aa	Known RBP	12.99	□□□□□ -0.33
SERGEF-223	ENST00000533328	ERG28	Q9UKR5	140 aa		12.99	□□□□□ -0.33
SERGEF-223	ENST00000533328	PLA2G2D	Q9UNK4	145 aa		12.99	□□□□□ -0.33
SERGEF-223	ENST00000533328	PFN2	P35080	140 aa		12.98	□□□□□ -0.33
SERGEF-223	ENST00000533328	SFTA2	Q6UW10	78 aa		12.98	□□□□□ -0.33
SERGEF-223	ENST00000533328	COX17	Q14061	63 aa		12.97	□□□□□ -0.33
SERGEF-223	ENST00000533328	SPINK6	Q6UWN8	80 aa		12.97	□□□□□ -0.33
SERGEF-223	ENST00000533328	ATP6V1G1	O75348	118 aa		12.96	□□□□□ -0.33
SERGEF-223	ENST00000533328	PLN	P26678	52 aa		12.96	□□□□□ -0.33
SERGEF-223	ENST00000533328	C1orf137	Q5JT78	98 aa		12.96	□□□□□ -0.33
SERGEF-223	ENST00000533328	PMCHL2	Q9BQD1	86 aa		12.96	□□□□□ -0.33
SERGEF-223	ENST00000533328	MAP1LC3C	Q9BXW4	147 aa		12.96	□□□□□ -0.33
SERGEF-223	ENST00000533328	TP73-AS1	Q9UF72	201 aa		12.96	□□□□□ -0.33
SERGEF-223	ENST00000533328	DPM2	O94777	84 aa		12.95	□□□□□ -0.34
SERGEF-223	ENST00000533328	IGLV5-37	A0A075B6J1	123 aa		12.94	□□□□□ -0.34
SERGEF-223	ENST00000533328	SND1-IT1	Q9HBX3	110 aa		12.94	□□□□□ -0.34
SERGEF-223	ENST00000533328	TNXB	P22105	4242 aa		12.93	□□□□□ -0.34
SERGEF-223	ENST00000533328	MT1HL1	P0DM35	61 aa		12.93	□□□□□ -0.34
SERGEF-223	ENST00000533328	UBE2B	P63146	152 aa		12.93	□□□□□ -0.34
SERGEF-223	ENST00000533328	SYS1-DBNDD2	H3BUS1	97 aa		12.92	□□□□□ -0.34
SERGEF-223	ENST00000533328	IGKC	P01834	107 aa		12.92	□□□□□ -0.34
SERGEF-223	ENST00000533328	IGLV7-43	P04211	117 aa		12.92	□□□□□ -0.34
SERGEF-223	ENST00000533328	TSPEAR-AS2	P59090	65 aa		12.92	□□□□□ -0.34
SERGEF-223	ENST00000533328	LBH	Q53QV2	105 aa	Predicted RBP	12.92	□□□□□ -0.34
SERGEF-223	ENST00000533328	MRPL55	Q7Z7F7	128 aa	Known RBP	12.92	□□□□□ -0.34

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