RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 LINC00474Q9P2X8 69 aa0.38□□□□□ -2.35
PKHD1L1-203ENST00000533183 SSSCA1O60232 199 aa0.37□□□□□ -2.35
PKHD1L1-203ENST00000533183 PRO3102Q9H379 93 aa0.37□□□□□ -2.35
PKHD1L1-203ENST00000533183 DYNC1H1Q14204 4646 aaKnown RBP0.37□□□□□ -2.35
PKHD1L1-203ENST00000533183 CHD9Q3L8U1 2897 aa0.37□□□□□ -2.35
PKHD1L1-203ENST00000533183 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
PKHD1L1-203ENST00000533183 STARD9Q9P2P6 4700 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 HRNRQ86YZ3 2850 aaPredicted RBP0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 TMEM131LA2VDJ0 1609 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 TRBV7-3A0A075B6L6 115 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 LINC00587B1AMM8 73 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 TNFP01375 233 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 C9orf153Q5TBE3 101 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 COMMD6Q7Z4G1 85 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 MGST2Q99735 147 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 KIAA0586Q9BVV6 1533 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 ZNF609O15014 1411 aa0.36□□□□□ -2.35
PKHD1L1-203ENST00000533183 LRP2P98164 4655 aa0.35□□□□□ -2.35
PKHD1L1-203ENST00000533183 SHROOM2Q13796 1616 aa0.35□□□□□ -2.35
PKHD1L1-203ENST00000533183 KTN1Q86UP2 1357 aaKnown RBP0.35□□□□□ -2.35
PKHD1L1-203ENST00000533183 EFCAB6Q5THR3 1501 aa0.35□□□□□ -2.35
PKHD1L1-203ENST00000533183 AMELXQ99217 191 aa0.35□□□□□ -2.35
PKHD1L1-203ENST00000533183 LINC00846Q9NV44 126 aa0.35□□□□□ -2.35
PKHD1L1-203ENST00000533183 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.35
PKHD1L1-203ENST00000533183 TPPP2P59282 170 aa0.34□□□□□ -2.36
PKHD1L1-203ENST00000533183 CNFNQ9BYD5 112 aa0.34□□□□□ -2.36
PKHD1L1-203ENST00000533183 DYNLRB1Q9NP97 96 aa0.34□□□□□ -2.36
PKHD1L1-203ENST00000533183 KDM3BQ7LBC6 1761 aa0.34□□□□□ -2.36
PKHD1L1-203ENST00000533183 MAGI2Q86UL8 1455 aa0.34□□□□□ -2.36
PKHD1L1-203ENST00000533183 MYOZ3Q8TDC0 251 aa0.33□□□□□ -2.36
PKHD1L1-203ENST00000533183 C2orf88Q9BSF0 95 aa0.33□□□□□ -2.36
PKHD1L1-203ENST00000533183 BTAF1O14981 1849 aa0.33□□□□□ -2.36
PKHD1L1-203ENST00000533183 COL4A6Q14031 1691 aa0.33□□□□□ -2.36
PKHD1L1-203ENST00000533183 HECTD4Q9Y4D8 3996 aa0.33□□□□□ -2.36
PKHD1L1-203ENST00000533183 SBF2Q86WG5 1849 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 F8VRH5 84 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 S100A3P33764 101 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 BAGE2Q86Y30 109 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 IER3IP1Q9Y5U9 82 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 MAPKBP1O60336 1514 aa0.32□□□□□ -2.36
PKHD1L1-203ENST00000533183 ALMS1Q8TCU4 4167 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 DOPEY2Q9Y3R5 2298 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 CORTO00230 105 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 ASIPP42127 132 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 HAMPP81172 84 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 TMEM170BQ5T4T1 132 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 CUX1P39880 1505 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 NRKQ7Z2Y5 1582 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 KIAA0556O60303 1618 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 CC2D2AQ9P2K1 1620 aa0.31□□□□□ -2.36
PKHD1L1-203ENST00000533183 SACSQ9NZJ4 4579 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 DNAH1Q9P2D7 4330 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 MYOM2P54296 1465 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 PTPRQQ9UMZ3 2332 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 LOC285095A0A1B0GVY8 99 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 F6UZH7 168 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 UQCR11O14957 56 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 SPRR2DP22532 72 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 MT4P47944 62 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 COX17Q14061 63 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 LINC00472Q9H8W2 130 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 PRO0255Q9UI72 69 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 U3KQA8 63 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 DIP2AQ14689 1571 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 MAP3K4Q9Y6R4 1608 aa0.3□□□□□ -2.36
PKHD1L1-203ENST00000533183 THOC2Q8NI27 1593 aaKnown RBP0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 UBE2L5PA0A1B0GUS4 154 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 IGLC7A0M8Q6 106 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 FAM24AA6NFZ4 105 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 HMGN4O00479 90 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 APOC3P02656 99 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 SPRR2EP22531 72 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 SPRR2BP35325 72 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 SPRR2AP35326 72 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 GNG4P50150 75 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 UBE2L3P68036 154 aaKnown RBP0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 TMEM203Q969S6 136 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 DPH3P1Q9H4G8 78 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 GNG8Q9UK08 70 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 LINC01558Q9Y6Z2 57 aa0.29□□□□□ -2.36
PKHD1L1-203ENST00000533183 TJP1Q07157 1748 aa0.28□□□□□ -2.36
PKHD1L1-203ENST00000533183 BCE1O60756 84 aa0.28□□□□□ -2.36
PKHD1L1-203ENST00000533183 SPCS1Q9Y6A9 102 aa0.28□□□□□ -2.36
PKHD1L1-203ENST00000533183 PLCE1Q9P212 2302 aa0.28□□□□□ -2.36
PKHD1L1-203ENST00000533183 TULP4Q9NRJ4 1543 aa0.28□□□□□ -2.37
PKHD1L1-203ENST00000533183 KIF21AQ7Z4S6 1674 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 IFITM1P13164 125 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 PPP3R1P63098 170 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 CHD7Q9P2D1 2997 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 C10orf71Q711Q0 1435 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 ADAMTS12P58397 1594 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 MYOM1P52179 1685 aa0.27□□□□□ -2.37
PKHD1L1-203ENST00000533183 ACACAQ13085 2346 aa0.26□□□□□ -2.37
PKHD1L1-203ENST00000533183 S100A1P23297 94 aa0.26□□□□□ -2.37
PKHD1L1-203ENST00000533183 MRPS10P82664 201 aaKnown RBP0.26□□□□□ -2.37
PKHD1L1-203ENST00000533183 SVBPQ8N300 66 aa0.26□□□□□ -2.37
PKHD1L1-203ENST00000533183 PRKDCP78527 4128 aaKnown RBP0.26□□□□□ -2.37
PKHD1L1-203ENST00000533183 SMG6Q86US8 1419 aaKnown RBP0.26□□□□□ -2.37
PKHD1L1-203ENST00000533183 FAM135AQ9P2D6 1515 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms