RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 CDPF1Q6NVV7 123 aa13.2□□□□□ -0.3
CHID1-220ENST00000532909 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
CHID1-220ENST00000532909 PKD1P98161 4303 aa13.19□□□□□ -0.3
CHID1-220ENST00000532909 ZNF561-AS1K7EIQ3 104 aa13.19□□□□□ -0.3
CHID1-220ENST00000532909 CKS1BP61024 79 aa13.19□□□□□ -0.3
CHID1-220ENST00000532909 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
CHID1-220ENST00000532909 DNAH11Q96DT5 4516 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 ZNF815PA8K554 130 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 C16orf90A8MZG2 172 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 NDUFA1O15239 70 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 SPAG11BQ08648 103 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 C2orf48Q96LS8 159 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 NDUFA12Q9UI09 145 aa13.18□□□□□ -0.3
CHID1-220ENST00000532909 GVQW2A0A096LPI5 108 aaPredicted RBP13.17□□□□□ -0.3
CHID1-220ENST00000532909 IGKV2D-26A0A0A0MRZ7 120 aa13.17□□□□□ -0.3
CHID1-220ENST00000532909 CIRBPQ14011 172 aaKnown RBP13.17□□□□□ -0.3
CHID1-220ENST00000532909 DYNC1H1Q14204 4646 aaKnown RBP13.17□□□□□ -0.3
CHID1-220ENST00000532909 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
CHID1-220ENST00000532909 SCGB1D4Q6XE38 83 aa13.15□□□□□ -0.3
CHID1-220ENST00000532909 C14orf144Q96I85 54 aa13.14□□□□□ -0.31
CHID1-220ENST00000532909 RYR1P21817 5038 aa13.14□□□□□ -0.31
CHID1-220ENST00000532909 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
CHID1-220ENST00000532909 PKIGQ9Y2B9 76 aa13.13□□□□□ -0.31
CHID1-220ENST00000532909 USP17L23D6RBM5 183 aa13.12□□□□□ -0.31
CHID1-220ENST00000532909 TIMM17BO60830 172 aa13.12□□□□□ -0.31
CHID1-220ENST00000532909 PCP2Q8IVA1 136 aa13.12□□□□□ -0.31
CHID1-220ENST00000532909 COPS9Q8WXC6 57 aa13.12□□□□□ -0.31
CHID1-220ENST00000532909 ZNF625Q96I27 306 aaPredicted RBP13.12□□□□□ -0.31
CHID1-220ENST00000532909 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
CHID1-220ENST00000532909 TSPEAR-AS2P59090 65 aa13.11□□□□□ -0.31
CHID1-220ENST00000532909 COX17Q14061 63 aa13.11□□□□□ -0.31
CHID1-220ENST00000532909 KIAA0087Q14695 138 aa13.11□□□□□ -0.31
CHID1-220ENST00000532909 Q6ZVH6 145 aa13.11□□□□□ -0.31
CHID1-220ENST00000532909 C15orf56Q8N910 161 aa13.11□□□□□ -0.31
CHID1-220ENST00000532909 NTN5Q8WTR8 489 aaPredicted RBP13.11□□□□□ -0.31
CHID1-220ENST00000532909 TRBV30A0A0K0K1B3 111 aa13.1□□□□□ -0.31
CHID1-220ENST00000532909 EREGO14944 169 aa13.09□□□□□ -0.31
CHID1-220ENST00000532909 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
CHID1-220ENST00000532909 Q6ZRN7 208 aaPredicted RBP13.09□□□□□ -0.31
CHID1-220ENST00000532909 CAMK2N2Q96S95 79 aa13.09□□□□□ -0.31
CHID1-220ENST00000532909 KRTAP4-5Q9BYR2 181 aa13.09□□□□□ -0.31
CHID1-220ENST00000532909 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
CHID1-220ENST00000532909 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
CHID1-220ENST00000532909 PRO1933Q9H354 126 aa13.08□□□□□ -0.32
CHID1-220ENST00000532909 MEIG1Q5JSS6 88 aa13.07□□□□□ -0.32
CHID1-220ENST00000532909 MAPKAPK5-AS1Q8N8E1 139 aa13.07□□□□□ -0.32
CHID1-220ENST00000532909 ABCA13Q86UQ4 5058 aa13.06□□□□□ -0.32
CHID1-220ENST00000532909 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
CHID1-220ENST00000532909 TAL2Q16559 108 aa13.06□□□□□ -0.32
CHID1-220ENST00000532909 SPANXB1Q9NS25 103 aaPredicted RBP13.06□□□□□ -0.32
CHID1-220ENST00000532909 CDK2AP2O75956 126 aa13.05□□□□□ -0.32
CHID1-220ENST00000532909 SYCNQ0VAF6 134 aa13.05□□□□□ -0.32
CHID1-220ENST00000532909 DDTP30046 118 aa13.04□□□□□ -0.32
CHID1-220ENST00000532909 HIGD2BQ4VC39 106 aa13.04□□□□□ -0.32
CHID1-220ENST00000532909 PPDPFQ9H3Y8 114 aa13.04□□□□□ -0.32
CHID1-220ENST00000532909 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
CHID1-220ENST00000532909 CNBPP62633 177 aaKnown RBP13.03□□□□□ -0.32
CHID1-220ENST00000532909 CARD19Q96LW7 228 aa13.03□□□□□ -0.32
CHID1-220ENST00000532909 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
CHID1-220ENST00000532909 LRCOL1A6NCL2 159 aa13.02□□□□□ -0.33
CHID1-220ENST00000532909 IFITM1P13164 125 aa13.02□□□□□ -0.33
CHID1-220ENST00000532909 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHID1-220ENST00000532909 SPANXDQ9BXN6 97 aa13.01□□□□□ -0.33
CHID1-220ENST00000532909 SPANXCQ9NY87 97 aa13.01□□□□□ -0.33
CHID1-220ENST00000532909 KRTAP10-2P60368 255 aa13□□□□□ -0.33
CHID1-220ENST00000532909 HSD52Q0P140 79 aa13□□□□□ -0.33
CHID1-220ENST00000532909 C2orf82Q6UX34 121 aa13□□□□□ -0.33
CHID1-220ENST00000532909 A0A087WTM6 91 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 M0R143 59 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 Q8N814 137 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 HIST1H4GQ99525 98 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 TP73-AS1Q9UF72 201 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 HSPG2P98160 4391 aa12.99□□□□□ -0.33
CHID1-220ENST00000532909 LINC00158P58513 81 aa12.98□□□□□ -0.33
CHID1-220ENST00000532909 TMEM238LA0A1B0GVL6 79 aa12.97□□□□□ -0.33
CHID1-220ENST00000532909 A6NJY4 79 aa12.97□□□□□ -0.33
CHID1-220ENST00000532909 LECT2O14960 151 aa12.96□□□□□ -0.33
CHID1-220ENST00000532909 TLX1NBP0CAT3 122 aa12.96□□□□□ -0.33
CHID1-220ENST00000532909 Q6ZRU5 148 aa12.96□□□□□ -0.33
CHID1-220ENST00000532909 NDUFC2-KCTD14E9PQ53 114 aa12.95□□□□□ -0.34
CHID1-220ENST00000532909 SMIM13P0DJ93 91 aa12.95□□□□□ -0.34
CHID1-220ENST00000532909 RPL24P83731 157 aaKnown RBP12.95□□□□□ -0.34
CHID1-220ENST00000532909 C6orf48Q9UBA6 75 aa12.95□□□□□ -0.34
CHID1-220ENST00000532909 PFN2P35080 140 aa12.94□□□□□ -0.34
CHID1-220ENST00000532909 LITAFQ99732 161 aa12.94□□□□□ -0.34
CHID1-220ENST00000532909 LRP1BQ9NZR2 4599 aa12.94□□□□□ -0.34
CHID1-220ENST00000532909 Q8N1X5 172 aa12.93□□□□□ -0.34
CHID1-220ENST00000532909 LINC00526Q96FQ7 95 aa12.93□□□□□ -0.34
CHID1-220ENST00000532909 LOC107984640A0A0U1RRK4 108 aa12.92□□□□□ -0.34
CHID1-220ENST00000532909 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
CHID1-220ENST00000532909 MIR7-3HGQ8N6C7 128 aa12.92□□□□□ -0.34
CHID1-220ENST00000532909 CTAG1AP78358 180 aa12.91□□□□□ -0.34
CHID1-220ENST00000532909 WFDC2Q14508 124 aa12.91□□□□□ -0.34
CHID1-220ENST00000532909 LOC107984156A0A0G2JMH3 177 aa12.9□□□□□ -0.34
CHID1-220ENST00000532909 FUSP35637 526 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHID1-220ENST00000532909 ARL17AQ8IVW1 177 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms