RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 MUC7Q8TAX7 377 aa6.33□□□□□ -1.4
CTNND1-232ENST00000532649 ZNF462Q96JM2 2506 aa6.32□□□□□ -1.4
CTNND1-232ENST00000532649 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CTNND1-232ENST00000532649 TRIAP1O43715 76 aa6.32□□□□□ -1.4
CTNND1-232ENST00000532649 Q6JHZ5 121 aa6.32□□□□□ -1.4
CTNND1-232ENST00000532649 SOSTDC1Q6X4U4 206 aa6.32□□□□□ -1.4
CTNND1-232ENST00000532649 TSHBP01222 138 aa6.32□□□□□ -1.4
CTNND1-232ENST00000532649 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-232ENST00000532649 MRPS12O15235 138 aaKnown RBP6.32□□□□□ -1.4
CTNND1-232ENST00000532649 C2CD3Q4AC94 2353 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 ZNF580Q9UK33 172 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 LRRK2Q5S007 2527 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 NRACQ8N912 160 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 MRGPRG-AS1Q2M3A8 158 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 IMUPQ9GZP8 106 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 LINC00208Q96KT6 92 aa6.31□□□□□ -1.4
CTNND1-232ENST00000532649 BRI3O95415 125 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 Q9BRP9 147 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 SMIM11BQ8TCY0 68 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 PTPRBP23467 1997 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 PYGO1Q9Y3Y4 419 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 CELA1Q9UNI1 258 aa6.3□□□□□ -1.4
CTNND1-232ENST00000532649 DNAH12Q6ZR08 3092 aa6.29□□□□□ -1.4
CTNND1-232ENST00000532649 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
CTNND1-232ENST00000532649 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
CTNND1-232ENST00000532649 Q8IZM0 81 aa6.29□□□□□ -1.4
CTNND1-232ENST00000532649 CYSRT1A8MQ03 144 aa6.28□□□□□ -1.4
CTNND1-232ENST00000532649 GAS8-AS1O95177 125 aa6.28□□□□□ -1.4
CTNND1-232ENST00000532649 PRLHP81277 87 aa6.28□□□□□ -1.4
CTNND1-232ENST00000532649 FN1P02751 2386 aaKnown RBP6.28□□□□□ -1.4
CTNND1-232ENST00000532649 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
CTNND1-232ENST00000532649 POM121L12Q8N7R1 296 aa6.27□□□□□ -1.4
CTNND1-232ENST00000532649 A8MZ25 164 aa6.27□□□□□ -1.41
CTNND1-232ENST00000532649 PSPHP1O15172 72 aa6.27□□□□□ -1.41
CTNND1-232ENST00000532649 EGFEM1PQ0D2K5 195 aa6.27□□□□□ -1.41
CTNND1-232ENST00000532649 USP9YO00507 2555 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-232ENST00000532649 Q6ZTC4 211 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 F8WDY8 70 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 H0Y9P7 68 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 FAM229AH3BQW9 127 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 LINC01547P58512 204 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-232ENST00000532649 NHLRC4P0CG21 123 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-232ENST00000532649 FASNP49327 2511 aaKnown RBP6.26□□□□□ -1.41
CTNND1-232ENST00000532649 BEAN1Q3B7T3 259 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 SBSPONQ8IVN8 264 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
CTNND1-232ENST00000532649 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
CTNND1-232ENST00000532649 YPEL4Q96NS1 127 aa6.25□□□□□ -1.41
CTNND1-232ENST00000532649 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
CTNND1-232ENST00000532649 MAPKAPK5-AS1Q8N8E1 139 aa6.25□□□□□ -1.41
CTNND1-232ENST00000532649 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 XGP55808 180 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 CDC42SE2Q9NRR3 84 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 Q8N2B8 174 aa6.24□□□□□ -1.41
CTNND1-232ENST00000532649 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
CTNND1-232ENST00000532649 SETD2Q9BYW2 2564 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-232ENST00000532649 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
CTNND1-232ENST00000532649 PCSK5Q92824 1860 aa6.23□□□□□ -1.41
CTNND1-232ENST00000532649 J3QL48 77 aa6.23□□□□□ -1.41
CTNND1-232ENST00000532649 TET2Q6N021 2002 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-232ENST00000532649 FHL2Q14192 279 aa6.23□□□□□ -1.41
CTNND1-232ENST00000532649 CRYGAP11844 174 aa6.22□□□□□ -1.41
CTNND1-232ENST00000532649 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
CTNND1-232ENST00000532649 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
CTNND1-232ENST00000532649 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
CTNND1-232ENST00000532649 PKD1L2Q7Z442 2459 aa6.21□□□□□ -1.41
CTNND1-232ENST00000532649 Q8N814 137 aa6.21□□□□□ -1.42
CTNND1-232ENST00000532649 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
CTNND1-232ENST00000532649 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
CTNND1-232ENST00000532649 SPAG11AQ6PDA7 123 aa6.2□□□□□ -1.42
CTNND1-232ENST00000532649 A0A087WSZ3 146 aa6.2□□□□□ -1.42
CTNND1-232ENST00000532649 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
CTNND1-232ENST00000532649 IGIPA6NJ69 53 aa6.19□□□□□ -1.42
CTNND1-232ENST00000532649 ANKRD17O75179 2603 aaKnown RBP6.19□□□□□ -1.42
CTNND1-232ENST00000532649 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
CTNND1-232ENST00000532649 A0A1B0GU69 56 aa6.19□□□□□ -1.42
CTNND1-232ENST00000532649 COX6A2Q02221 97 aa6.19□□□□□ -1.42
CTNND1-232ENST00000532649 LINC00575Q6W349 94 aa6.19□□□□□ -1.42
CTNND1-232ENST00000532649 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
CTNND1-232ENST00000532649 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 C9orf116Q5BN46 136 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-232ENST00000532649 COL27A1Q8IZC6 1860 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-232ENST00000532649 POLQO75417 2590 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 MTORP42345 2549 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 AGRNO00468 2067 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 ACYP2P14621 99 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 CXCL6P80162 114 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 Q6ZSN1 163 aa6.18□□□□□ -1.42
CTNND1-232ENST00000532649 FHL3Q13643 280 aa6.17□□□□□ -1.42
CTNND1-232ENST00000532649 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
CTNND1-232ENST00000532649 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
CTNND1-232ENST00000532649 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms