RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-202ENST00000532602 Q6ZSN1 163 aa10.56□□□□□ -0.72
PCDHA9-202ENST00000532602 NDUFC1O43677 76 aa10.56□□□□□ -0.72
PCDHA9-202ENST00000532602 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
PCDHA9-202ENST00000532602 COX6A2Q02221 97 aa10.56□□□□□ -0.72
PCDHA9-202ENST00000532602 MRPL55Q7Z7F7 128 aaKnown RBP10.56□□□□□ -0.72
PCDHA9-202ENST00000532602 USP9YO00507 2555 aaPredicted RBP10.55□□□□□ -0.72
PCDHA9-202ENST00000532602 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
PCDHA9-202ENST00000532602 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
PCDHA9-202ENST00000532602 C2orf48Q96LS8 159 aa10.54□□□□□ -0.72
PCDHA9-202ENST00000532602 IMUPQ9GZP8 106 aa10.54□□□□□ -0.72
PCDHA9-202ENST00000532602 SERP1Q9Y6X1 66 aa10.54□□□□□ -0.72
PCDHA9-202ENST00000532602 A0A1B0GUV1 79 aa10.54□□□□□ -0.72
PCDHA9-202ENST00000532602 MT-ATP8P03928 68 aa10.54□□□□□ -0.72
PCDHA9-202ENST00000532602 SPTSSBQ8NFR3 76 aa10.54□□□□□ -0.72
PCDHA9-202ENST00000532602 Q6JHZ5 121 aa10.53□□□□□ -0.72
PCDHA9-202ENST00000532602 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
PCDHA9-202ENST00000532602 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
PCDHA9-202ENST00000532602 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
PCDHA9-202ENST00000532602 V9GYY9 64 aa10.53□□□□□ -0.72
PCDHA9-202ENST00000532602 TRBV10-3A0A0K0K1G6 114 aa10.53□□□□□ -0.72
PCDHA9-202ENST00000532602 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.72
PCDHA9-202ENST00000532602 SETD2Q9BYW2 2564 aaPredicted RBP10.52□□□□□ -0.73
PCDHA9-202ENST00000532602 SVIPQ8NHG7 77 aa10.51□□□□□ -0.73
PCDHA9-202ENST00000532602 COL27A1Q8IZC6 1860 aaPredicted RBP10.51□□□□□ -0.73
PCDHA9-202ENST00000532602 LYPD5Q6UWN5 251 aa10.51□□□□□ -0.73
PCDHA9-202ENST00000532602 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
PCDHA9-202ENST00000532602 PCSK5Q92824 1860 aa10.5□□□□□ -0.73
PCDHA9-202ENST00000532602 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
PCDHA9-202ENST00000532602 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
PCDHA9-202ENST00000532602 SERP2Q8N6R1 65 aa10.49□□□□□ -0.73
PCDHA9-202ENST00000532602 LINC01556Q5JQF7 62 aa10.49□□□□□ -0.73
PCDHA9-202ENST00000532602 BRK1Q8WUW1 75 aa10.49□□□□□ -0.73
PCDHA9-202ENST00000532602 LINC01561Q8N1V8 128 aa10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 FASNP49327 2511 aaKnown RBP10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 CELA1Q9UNI1 258 aa10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 PRR3P79522 188 aaKnown RBP10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 FHL3Q13643 280 aa10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 Q8N2B8 174 aa10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 AMELXQ99217 191 aa10.48□□□□□ -0.73
PCDHA9-202ENST00000532602 Q8N814 137 aa10.47□□□□□ -0.73
PCDHA9-202ENST00000532602 PRYO14603 147 aa10.46□□□□□ -0.73
PCDHA9-202ENST00000532602 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.74
PCDHA9-202ENST00000532602 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
PCDHA9-202ENST00000532602 PKD1L2Q7Z442 2459 aa10.45□□□□□ -0.74
PCDHA9-202ENST00000532602 Q6ZVQ6 151 aa10.45□□□□□ -0.74
PCDHA9-202ENST00000532602 URB1-AS1Q96HZ7 61 aa10.45□□□□□ -0.74
PCDHA9-202ENST00000532602 AGRNO00468 2067 aa10.43□□□□□ -0.74
PCDHA9-202ENST00000532602 Q9BRP9 147 aa10.43□□□□□ -0.74
PCDHA9-202ENST00000532602 ESRGQ1W209 222 aa10.43□□□□□ -0.74
PCDHA9-202ENST00000532602 KRTAP24-1Q3LI83 254 aa10.41□□□□□ -0.74
PCDHA9-202ENST00000532602 TSPEAR-AS2P59090 65 aa10.4□□□□□ -0.74
PCDHA9-202ENST00000532602 LIMD2Q9BT23 127 aa10.4□□□□□ -0.74
PCDHA9-202ENST00000532602 SPTBN4Q9H254 2564 aa10.4□□□□□ -0.74
PCDHA9-202ENST00000532602 SNURFQ9Y675 71 aa10.4□□□□□ -0.75
PCDHA9-202ENST00000532602 LINC00310P59036 64 aa10.39□□□□□ -0.75
PCDHA9-202ENST00000532602 IGHV6-1A0A0B4J1U7 121 aa10.39□□□□□ -0.75
PCDHA9-202ENST00000532602 MTORP42345 2549 aa10.38□□□□□ -0.75
PCDHA9-202ENST00000532602 FAM30AQ9NZY2 134 aa10.38□□□□□ -0.75
PCDHA9-202ENST00000532602 Q6ZRU5 148 aa10.37□□□□□ -0.75
PCDHA9-202ENST00000532602 PRR4Q16378 134 aa10.37□□□□□ -0.75
PCDHA9-202ENST00000532602 MDFIQ99750 246 aa10.37□□□□□ -0.75
PCDHA9-202ENST00000532602 COX7CP15954 63 aa10.36□□□□□ -0.75
PCDHA9-202ENST00000532602 CEP350Q5VT06 3117 aa10.36□□□□□ -0.75
PCDHA9-202ENST00000532602 A0A087WSZ3 146 aa10.35□□□□□ -0.75
PCDHA9-202ENST00000532602 C5orf42Q9H799 3197 aa10.35□□□□□ -0.75
PCDHA9-202ENST00000532602 LINC00208Q96KT6 92 aa10.35□□□□□ -0.75
PCDHA9-202ENST00000532602 PCNTO95613 3336 aa10.35□□□□□ -0.75
PCDHA9-202ENST00000532602 SBSPONQ8IVN8 264 aa10.34□□□□□ -0.75
PCDHA9-202ENST00000532602 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
PCDHA9-202ENST00000532602 A6NED7 52 aa10.34□□□□□ -0.75
PCDHA9-202ENST00000532602 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
PCDHA9-202ENST00000532602 A0A087WYN8 130 aa10.33□□□□□ -0.76
PCDHA9-202ENST00000532602 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
PCDHA9-202ENST00000532602 H3BNG1 76 aa10.33□□□□□ -0.76
PCDHA9-202ENST00000532602 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
PCDHA9-202ENST00000532602 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
PCDHA9-202ENST00000532602 LINC00575Q6W349 94 aa10.3□□□□□ -0.76
PCDHA9-202ENST00000532602 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
PCDHA9-202ENST00000532602 A8MTW9 85 aa10.3□□□□□ -0.76
PCDHA9-202ENST00000532602 PRLHP81277 87 aa10.29□□□□□ -0.76
PCDHA9-202ENST00000532602 Q6Q795 121 aa10.29□□□□□ -0.76
PCDHA9-202ENST00000532602 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
PCDHA9-202ENST00000532602 A0A096LNJ9 63 aa10.28□□□□□ -0.76
PCDHA9-202ENST00000532602 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
PCDHA9-202ENST00000532602 XGP55808 180 aa10.28□□□□□ -0.76
PCDHA9-202ENST00000532602 LINC00337Q8N6G1 96 aa10.28□□□□□ -0.76
PCDHA9-202ENST00000532602 TRBV7-6A0A0J9YX20 115 aa10.27□□□□□ -0.77
PCDHA9-202ENST00000532602 POLQO75417 2590 aa10.27□□□□□ -0.77
PCDHA9-202ENST00000532602 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
PCDHA9-202ENST00000532602 Q8N3U1 123 aa10.25□□□□□ -0.77
PCDHA9-202ENST00000532602 IGLV5-39A0A0G2JS06 123 aa10.24□□□□□ -0.77
PCDHA9-202ENST00000532602 X6R8D5 127 aa10.24□□□□□ -0.77
PCDHA9-202ENST00000532602 Q9UF83 564 aa10.23□□□□□ -0.77
PCDHA9-202ENST00000532602 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
PCDHA9-202ENST00000532602 DEFB116Q30KQ4 102 aa10.22□□□□□ -0.77
PCDHA9-202ENST00000532602 FAM19A4Q96LR4 140 aa10.22□□□□□ -0.77
PCDHA9-202ENST00000532602 SMIM26A0A096LP01 95 aa10.21□□□□□ -0.78
PCDHA9-202ENST00000532602 F8P00451 2351 aa10.2□□□□□ -0.78
PCDHA9-202ENST00000532602 HCG22E2RYF7 251 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms