RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NDUFS5O43920 106 aa10.82□□□□□ -0.68
PCDHA3-202ENST00000532566 ENHOQ6UWT2 76 aa10.82□□□□□ -0.68
PCDHA3-202ENST00000532566 FAM19A1Q7Z5A9 133 aa10.82□□□□□ -0.68
PCDHA3-202ENST00000532566 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
PCDHA3-202ENST00000532566 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
PCDHA3-202ENST00000532566 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
PCDHA3-202ENST00000532566 CFAP54Q96N23 3096 aa10.81□□□□□ -0.68
PCDHA3-202ENST00000532566 CCKP06307 115 aa10.81□□□□□ -0.68
PCDHA3-202ENST00000532566 PRB2P02812 416 aaPredicted RBP10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 MP68P56378 58 aa10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 EGFEM1PQ0D2K5 195 aa10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 Q6ZTC4 211 aa10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 Q9UF83 564 aa10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 HECTD1Q9ULT8 2610 aa10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 MAST4O15021 2626 aa10.8□□□□□ -0.68
PCDHA3-202ENST00000532566 TMEM258P61165 79 aa10.79□□□□□ -0.68
PCDHA3-202ENST00000532566 SCXQ7RTU7 201 aa10.79□□□□□ -0.68
PCDHA3-202ENST00000532566 J3KT08 172 aa10.78□□□□□ -0.68
PCDHA3-202ENST00000532566 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
PCDHA3-202ENST00000532566 TRIOO75962 3097 aa10.78□□□□□ -0.68
PCDHA3-202ENST00000532566 ZNF292O60281 2723 aa10.78□□□□□ -0.68
PCDHA3-202ENST00000532566 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.78□□□□□ -0.68
PCDHA3-202ENST00000532566 C20orf197Q8N268 126 aa10.78□□□□□ -0.68
PCDHA3-202ENST00000532566 ATRQ13535 2644 aa10.77□□□□□ -0.69
PCDHA3-202ENST00000532566 IGHV3OR16-9A0A0B4J2B5 98 aa10.77□□□□□ -0.69
PCDHA3-202ENST00000532566 F8P00451 2351 aa10.76□□□□□ -0.69
PCDHA3-202ENST00000532566 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
PCDHA3-202ENST00000532566 CENPEQ02224 2701 aa10.76□□□□□ -0.69
PCDHA3-202ENST00000532566 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
PCDHA3-202ENST00000532566 A0A087WYN8 130 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 Q8N814 137 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 MGAQ8IWI9 3026 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 NDUFC2O95298 119 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 Q6Q795 121 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 C3orf22Q8N5N4 141 aa10.75□□□□□ -0.69
PCDHA3-202ENST00000532566 USP17L23D6RBM5 183 aa10.74□□□□□ -0.69
PCDHA3-202ENST00000532566 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
PCDHA3-202ENST00000532566 USP24Q9UPU5 2620 aa10.74□□□□□ -0.69
PCDHA3-202ENST00000532566 LINC00337Q8N6G1 96 aa10.74□□□□□ -0.69
PCDHA3-202ENST00000532566 A0A096LNI7 61 aa10.73□□□□□ -0.69
PCDHA3-202ENST00000532566 M0QXV9 152 aa10.73□□□□□ -0.69
PCDHA3-202ENST00000532566 LYPD5Q6UWN5 251 aa10.73□□□□□ -0.69
PCDHA3-202ENST00000532566 C3orf84H3BNL1 204 aa10.72□□□□□ -0.69
PCDHA3-202ENST00000532566 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
PCDHA3-202ENST00000532566 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
PCDHA3-202ENST00000532566 H0Y9J4 135 aa10.72□□□□□ -0.69
PCDHA3-202ENST00000532566 Q6JHZ5 121 aa10.72□□□□□ -0.69
PCDHA3-202ENST00000532566 WFDC10BQ8IUB3 73 aa10.71□□□□□ -0.69
PCDHA3-202ENST00000532566 SERP2Q8N6R1 65 aa10.7□□□□□ -0.7
PCDHA3-202ENST00000532566 WDFY4Q6ZS81 3184 aa10.7□□□□□ -0.7
PCDHA3-202ENST00000532566 CELA1Q9UNI1 258 aa10.69□□□□□ -0.7
PCDHA3-202ENST00000532566 NDUFC2-KCTD14E9PQ53 114 aa10.68□□□□□ -0.7
PCDHA3-202ENST00000532566 A0A096LNT2 108 aa10.68□□□□□ -0.7
PCDHA3-202ENST00000532566 MGAM2Q2M2H8 2515 aa10.68□□□□□ -0.7
PCDHA3-202ENST00000532566 X6R8D5 127 aa10.67□□□□□ -0.7
PCDHA3-202ENST00000532566 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
PCDHA3-202ENST00000532566 A8MTW9 85 aa10.67□□□□□ -0.7
PCDHA3-202ENST00000532566 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
PCDHA3-202ENST00000532566 C2orf48Q96LS8 159 aa10.66□□□□□ -0.7
PCDHA3-202ENST00000532566 CDH23Q9H251 3354 aa10.66□□□□□ -0.7
PCDHA3-202ENST00000532566 CCDC179H3BU77 68 aa10.66□□□□□ -0.7
PCDHA3-202ENST00000532566 COX7CP15954 63 aa10.66□□□□□ -0.7
PCDHA3-202ENST00000532566 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
PCDHA3-202ENST00000532566 FLNAP21333 2647 aaKnown RBP10.65□□□□□ -0.7
PCDHA3-202ENST00000532566 XIRP2A4UGR9 3374 aa10.64□□□□□ -0.71
PCDHA3-202ENST00000532566 SOSTDC1Q6X4U4 206 aa10.63□□□□□ -0.71
PCDHA3-202ENST00000532566 F8WDY8 70 aa10.63□□□□□ -0.71
PCDHA3-202ENST00000532566 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
PCDHA3-202ENST00000532566 PPDPFQ9H3Y8 114 aa10.63□□□□□ -0.71
PCDHA3-202ENST00000532566 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
PCDHA3-202ENST00000532566 M0R2N4 97 aa10.62□□□□□ -0.71
PCDHA3-202ENST00000532566 FAM236DA0A1B0GTK5 79 aa10.62□□□□□ -0.71
PCDHA3-202ENST00000532566 FAM236CP0DP71 79 aa10.62□□□□□ -0.71
PCDHA3-202ENST00000532566 LINC00575Q6W349 94 aa10.62□□□□□ -0.71
PCDHA3-202ENST00000532566 Q6ZRU5 148 aa10.62□□□□□ -0.71
PCDHA3-202ENST00000532566 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
PCDHA3-202ENST00000532566 A0A087WVE0 104 aa10.59□□□□□ -0.71
PCDHA3-202ENST00000532566 SBSPONQ8IVN8 264 aa10.59□□□□□ -0.71
PCDHA3-202ENST00000532566 ITPR3Q14573 2671 aa10.58□□□□□ -0.72
PCDHA3-202ENST00000532566 FAM19A3Q7Z5A8 133 aa10.58□□□□□ -0.72
PCDHA3-202ENST00000532566 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
PCDHA3-202ENST00000532566 LITAFQ99732 161 aa10.57□□□□□ -0.72
PCDHA3-202ENST00000532566 LINC00846Q9NV44 126 aa10.57□□□□□ -0.72
PCDHA3-202ENST00000532566 PLAC8L1A1L4L8 177 aa10.56□□□□□ -0.72
PCDHA3-202ENST00000532566 C1orf137Q5JT78 98 aa10.56□□□□□ -0.72
PCDHA3-202ENST00000532566 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 NUPR2A6NF83 97 aa10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 LINC01556Q5JQF7 62 aa10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 CFAP46Q8IYW2 2715 aa10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 NDUFC1O43677 76 aa10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 ESRGQ1W209 222 aa10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
PCDHA3-202ENST00000532566 Q8NAQ8 132 aa10.54□□□□□ -0.72
PCDHA3-202ENST00000532566 SNURFQ9Y675 71 aa10.54□□□□□ -0.72
PCDHA3-202ENST00000532566 H3BNG1 76 aa10.53□□□□□ -0.72
PCDHA3-202ENST00000532566 FAM218AQ96MZ4 157 aa10.53□□□□□ -0.72
PCDHA3-202ENST00000532566 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms