RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
TSPAN4-220ENST00000532375 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
TSPAN4-220ENST00000532375 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
TSPAN4-220ENST00000532375 Q6ZRP5 223 aa8.74□□□□□ -1.01
TSPAN4-220ENST00000532375 FAM19A2Q8N3H0 131 aa8.74□□□□□ -1.01
TSPAN4-220ENST00000532375 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
TSPAN4-220ENST00000532375 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
TSPAN4-220ENST00000532375 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
TSPAN4-220ENST00000532375 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
TSPAN4-220ENST00000532375 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
TSPAN4-220ENST00000532375 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
TSPAN4-220ENST00000532375 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
TSPAN4-220ENST00000532375 SERF1AO75920 110 aa8.72□□□□□ -1.01
TSPAN4-220ENST00000532375 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
TSPAN4-220ENST00000532375 HNRNPA3P51991 378 aaKnown RBP8.72□□□□□ -1.01
TSPAN4-220ENST00000532375 NDUFA6P56556 154 aa8.72□□□□□ -1.01
TSPAN4-220ENST00000532375 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
TSPAN4-220ENST00000532375 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 HSBP1O75506 76 aa8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 SPINK8P0C7L1 97 aa8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 PACRGQ96M98 296 aaPredicted RBP8.71□□□□□ -1.02
TSPAN4-220ENST00000532375 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
TSPAN4-220ENST00000532375 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
TSPAN4-220ENST00000532375 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
TSPAN4-220ENST00000532375 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
TSPAN4-220ENST00000532375 PRSS2P07478 247 aa8.69□□□□□ -1.02
TSPAN4-220ENST00000532375 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
TSPAN4-220ENST00000532375 F8VRH5 84 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BKO60814 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BJP06899 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BOP23527 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BBP33778 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BDP58876 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 CKS1BP61024 79 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BCP62807 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST2H2BEQ16778 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 C9orf129Q5T035 196 aaKnown RBP8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BHQ93079 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BNQ99877 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HIST1H2BMQ99879 126 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 CHTOPQ9Y3Y2 248 aaKnown RBP8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 HERC1Q15751 4861 aa8.68□□□□□ -1.02
TSPAN4-220ENST00000532375 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
TSPAN4-220ENST00000532375 H3BRM9 83 aa8.67□□□□□ -1.02
TSPAN4-220ENST00000532375 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
TSPAN4-220ENST00000532375 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
TSPAN4-220ENST00000532375 CXCL5P42830 114 aa8.66□□□□□ -1.02
TSPAN4-220ENST00000532375 LEPROTL1O95214 131 aa8.65□□□□□ -1.02
TSPAN4-220ENST00000532375 ODF1Q14990 250 aa8.65□□□□□ -1.02
TSPAN4-220ENST00000532375 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
TSPAN4-220ENST00000532375 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
TSPAN4-220ENST00000532375 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
TSPAN4-220ENST00000532375 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
TSPAN4-220ENST00000532375 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
TSPAN4-220ENST00000532375 TMEM170BQ5T4T1 132 aa8.63□□□□□ -1.03
TSPAN4-220ENST00000532375 UBR4Q5T4S7 5183 aa8.62□□□□□ -1.03
TSPAN4-220ENST00000532375 FABP4P15090 132 aa8.62□□□□□ -1.03
TSPAN4-220ENST00000532375 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
TSPAN4-220ENST00000532375 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
TSPAN4-220ENST00000532375 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
TSPAN4-220ENST00000532375 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
TSPAN4-220ENST00000532375 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
TSPAN4-220ENST00000532375 ATP6V1G1O75348 118 aa8.6□□□□□ -1.03
TSPAN4-220ENST00000532375 S100A1P23297 94 aa8.6□□□□□ -1.03
TSPAN4-220ENST00000532375 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
TSPAN4-220ENST00000532375 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
TSPAN4-220ENST00000532375 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
TSPAN4-220ENST00000532375 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
TSPAN4-220ENST00000532375 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
TSPAN4-220ENST00000532375 H0Y8G0 127 aa8.57□□□□□ -1.04
TSPAN4-220ENST00000532375 M0QXV9 152 aa8.56□□□□□ -1.04
TSPAN4-220ENST00000532375 OXTP01178 125 aa8.56□□□□□ -1.04
TSPAN4-220ENST00000532375 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
TSPAN4-220ENST00000532375 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
TSPAN4-220ENST00000532375 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
TSPAN4-220ENST00000532375 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
TSPAN4-220ENST00000532375 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
TSPAN4-220ENST00000532375 DPM2O94777 84 aa8.54□□□□□ -1.04
TSPAN4-220ENST00000532375 PFN2P35080 140 aa8.54□□□□□ -1.04
TSPAN4-220ENST00000532375 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
TSPAN4-220ENST00000532375 COX17Q14061 63 aa8.54□□□□□ -1.04
TSPAN4-220ENST00000532375 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
TSPAN4-220ENST00000532375 TNXBP22105 4242 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 IGLV5-37A0A075B6J1 123 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 PLNP26678 52 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
TSPAN4-220ENST00000532375 IGKCP01834 107 aa8.52□□□□□ -1.05
TSPAN4-220ENST00000532375 C1orf137Q5JT78 98 aa8.52□□□□□ -1.05
TSPAN4-220ENST00000532375 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
TSPAN4-220ENST00000532375 Q8NDZ9 215 aa8.52□□□□□ -1.05
TSPAN4-220ENST00000532375 LEPROTO15243 131 aa8.51□□□□□ -1.05
TSPAN4-220ENST00000532375 LINC01545Q5VT33 79 aa8.51□□□□□ -1.05
TSPAN4-220ENST00000532375 IGLV7-43P04211 117 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms