RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 LINC00469Q8N7U9 141 aa5.69□□□□□ -1.5
NECTIN1-207ENST00000532197 URB1-AS1Q96HZ7 61 aa5.69□□□□□ -1.5
NECTIN1-207ENST00000532197 PACRGQ96M98 296 aaPredicted RBP5.69□□□□□ -1.5
NECTIN1-207ENST00000532197 C6orf48Q9UBA6 75 aa5.69□□□□□ -1.5
NECTIN1-207ENST00000532197 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 ATP5LO75964 103 aa5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 PRR3P79522 188 aaKnown RBP5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 ODF1Q14990 250 aa5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 C2orf82Q6UX34 121 aa5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 Q6ZRP5 223 aa5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 CHCHD1Q96BP2 118 aaKnown RBP5.68□□□□□ -1.5
NECTIN1-207ENST00000532197 SMIM1B2RUZ4 78 aa5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 F8VRH5 84 aa5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 H3BRM9 83 aa5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 C9orf116Q5BN46 136 aaPredicted RBP5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 CBLN2Q8IUK8 224 aa5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 SLC7A5P1Q8MH63 180 aa5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 TOMM7Q9P0U1 55 aa5.67□□□□□ -1.5
NECTIN1-207ENST00000532197 A0A1W2PNN7 141 aa5.66□□□□□ -1.5
NECTIN1-207ENST00000532197 IGLC3P0DOY3 106 aa5.66□□□□□ -1.5
NECTIN1-207ENST00000532197 HNRNPA3P51991 378 aaKnown RBP5.66□□□□□ -1.5
NECTIN1-207ENST00000532197 COX7B2Q8TF08 81 aa5.65□□□□□ -1.5
NECTIN1-207ENST00000532197 IGLV5-39A0A0G2JS06 123 aa5.64□□□□□ -1.51
NECTIN1-207ENST00000532197 NDUFA6P56556 154 aa5.64□□□□□ -1.51
NECTIN1-207ENST00000532197 PMCHL1Q16048 86 aa5.64□□□□□ -1.51
NECTIN1-207ENST00000532197 GAGE2EQ4V326 116 aa5.64□□□□□ -1.51
NECTIN1-207ENST00000532197 GAGE2DQ9UEU5 116 aa5.64□□□□□ -1.51
NECTIN1-207ENST00000532197 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 TRAV12-1A0A0B4J245 112 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 TRGC2P03986 189 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 SPINK8P0C7L1 97 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 SFTA2Q6UW10 78 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 BAGE3Q86Y29 109 aa5.63□□□□□ -1.51
NECTIN1-207ENST00000532197 HMCN2Q8NDA2 5059 aa5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 COLCA2A8K830 154 aa5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 HSBP1O75506 76 aa5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 SRSF9Q13242 221 aaKnown RBP eCLIP5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 C9orf129Q5T035 196 aaKnown RBP5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 IFI27L1Q96BM0 104 aa5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
NECTIN1-207ENST00000532197 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 C11orf86A6NJI1 115 aa5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 M0QXV9 152 aa5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 PHF5AQ7RTV0 110 aaKnown RBP5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 TP73-AS1Q9UF72 201 aa5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 CHTOPQ9Y3Y2 248 aaKnown RBP5.61□□□□□ -1.51
NECTIN1-207ENST00000532197 COX17Q14061 63 aa5.6□□□□□ -1.51
NECTIN1-207ENST00000532197 REG3GQ6UW15 175 aa5.6□□□□□ -1.51
NECTIN1-207ENST00000532197 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
NECTIN1-207ENST00000532197 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
NECTIN1-207ENST00000532197 SERF1AO75920 110 aa5.59□□□□□ -1.51
NECTIN1-207ENST00000532197 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
NECTIN1-207ENST00000532197 TMEM170BQ5T4T1 132 aa5.59□□□□□ -1.51
NECTIN1-207ENST00000532197 LINC01600Q96MT4 127 aa5.59□□□□□ -1.51
NECTIN1-207ENST00000532197 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
NECTIN1-207ENST00000532197 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
NECTIN1-207ENST00000532197 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
NECTIN1-207ENST00000532197 FAM19A2Q8N3H0 131 aa5.58□□□□□ -1.52
NECTIN1-207ENST00000532197 XAGE1AQ9HD64 81 aa5.58□□□□□ -1.52
NECTIN1-207ENST00000532197 IGLV5-37A0A075B6J1 123 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 IGLV7-43P04211 117 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 LINC00310P59036 64 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 UBE2BP63146 152 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 ZNF625Q96I27 306 aaPredicted RBP5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 HSPB8Q9UJY1 196 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 C22orf24Q9Y442 160 aa5.57□□□□□ -1.52
NECTIN1-207ENST00000532197 PLNP26678 52 aa5.56□□□□□ -1.52
NECTIN1-207ENST00000532197 MRPL55Q7Z7F7 128 aaKnown RBP5.56□□□□□ -1.52
NECTIN1-207ENST00000532197 KRTAP11-1Q8IUC1 163 aa5.56□□□□□ -1.52
NECTIN1-207ENST00000532197 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
NECTIN1-207ENST00000532197 FAT3Q8TDW7 4589 aa5.56□□□□□ -1.52
NECTIN1-207ENST00000532197 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
NECTIN1-207ENST00000532197 NUPR1O60356 82 aa5.55□□□□□ -1.52
NECTIN1-207ENST00000532197 LINC00587B1AMM8 73 aa5.54□□□□□ -1.52
NECTIN1-207ENST00000532197 PFN2P35080 140 aa5.54□□□□□ -1.52
NECTIN1-207ENST00000532197 HERV-K104P63124 156 aa5.54□□□□□ -1.52
NECTIN1-207ENST00000532197 NKAPP1Q8N9T2 125 aa5.54□□□□□ -1.52
NECTIN1-207ENST00000532197 SND1-IT1Q9HBX3 110 aa5.54□□□□□ -1.52
NECTIN1-207ENST00000532197 H0Y9J4 135 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 DPM2O94777 84 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
NECTIN1-207ENST00000532197 H0Y8G0 127 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms