RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
GPATCH4-216ENST00000531900 ATP5LO75964 103 aa6.78□□□□□ -1.32
GPATCH4-216ENST00000531900 IGLC3P0DOY3 106 aa6.78□□□□□ -1.32
GPATCH4-216ENST00000531900 SMIM1B2RUZ4 78 aa6.77□□□□□ -1.33
GPATCH4-216ENST00000531900 TRGC2P03986 189 aa6.77□□□□□ -1.33
GPATCH4-216ENST00000531900 GAGE2BQ13066 116 aa6.77□□□□□ -1.33
GPATCH4-216ENST00000531900 ODF1Q14990 250 aa6.77□□□□□ -1.33
GPATCH4-216ENST00000531900 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
GPATCH4-216ENST00000531900 NDUFC2-KCTD14E9PQ53 114 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 CXCL5P42830 114 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 SERTAD4-AS1Q5TG53 156 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 C2orf82Q6UX34 121 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 Q6ZRP5 223 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 LINC00469Q8N7U9 141 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 PACRGQ96M98 296 aaPredicted RBP6.76□□□□□ -1.33
GPATCH4-216ENST00000531900 TNXBP22105 4242 aa6.75□□□□□ -1.33
GPATCH4-216ENST00000531900 IGLV5-39A0A0G2JS06 123 aa6.75□□□□□ -1.33
GPATCH4-216ENST00000531900 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
GPATCH4-216ENST00000531900 PRSS2P07478 247 aa6.75□□□□□ -1.33
GPATCH4-216ENST00000531900 CKS1BP61024 79 aa6.75□□□□□ -1.33
GPATCH4-216ENST00000531900 PMCHL1Q16048 86 aa6.75□□□□□ -1.33
GPATCH4-216ENST00000531900 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
GPATCH4-216ENST00000531900 F8VRH5 84 aa6.74□□□□□ -1.33
GPATCH4-216ENST00000531900 H3BRM9 83 aa6.74□□□□□ -1.33
GPATCH4-216ENST00000531900 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
GPATCH4-216ENST00000531900 C9orf116Q5BN46 136 aaPredicted RBP6.74□□□□□ -1.33
GPATCH4-216ENST00000531900 HNRNPA3P51991 378 aaKnown RBP6.73□□□□□ -1.33
GPATCH4-216ENST00000531900 LINC00310P59036 64 aa6.73□□□□□ -1.33
GPATCH4-216ENST00000531900 BAGE3Q86Y29 109 aa6.73□□□□□ -1.33
GPATCH4-216ENST00000531900 COX7B2Q8TF08 81 aa6.73□□□□□ -1.33
GPATCH4-216ENST00000531900 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
GPATCH4-216ENST00000531900 HSBP1O75506 76 aa6.72□□□□□ -1.33
GPATCH4-216ENST00000531900 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
GPATCH4-216ENST00000531900 PRR3P79522 188 aaKnown RBP6.72□□□□□ -1.33
GPATCH4-216ENST00000531900 IFI27L1Q96BM0 104 aa6.72□□□□□ -1.33
GPATCH4-216ENST00000531900 C11orf86A6NJI1 115 aa6.71□□□□□ -1.34
GPATCH4-216ENST00000531900 NDUFA6P56556 154 aa6.71□□□□□ -1.34
GPATCH4-216ENST00000531900 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
GPATCH4-216ENST00000531900 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
GPATCH4-216ENST00000531900 SERF1AO75920 110 aa6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 SPINK8P0C7L1 97 aa6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 GAGE2EQ4V326 116 aa6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 FAM19A2Q8N3H0 131 aa6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 GAGE2DQ9UEU5 116 aa6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 CHTOPQ9Y3Y2 248 aaKnown RBP6.7□□□□□ -1.34
GPATCH4-216ENST00000531900 SRSF9Q13242 221 aaKnown RBP eCLIP6.69□□□□□ -1.34
GPATCH4-216ENST00000531900 FAM168BA1KXE4 195 aa6.68□□□□□ -1.34
GPATCH4-216ENST00000531900 NUPR1O60356 82 aa6.68□□□□□ -1.34
GPATCH4-216ENST00000531900 LEPROTL1O95214 131 aa6.68□□□□□ -1.34
GPATCH4-216ENST00000531900 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
GPATCH4-216ENST00000531900 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
GPATCH4-216ENST00000531900 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
GPATCH4-216ENST00000531900 SCO1O75880 301 aa6.67□□□□□ -1.34
GPATCH4-216ENST00000531900 SPINK6Q6UWN8 80 aa6.67□□□□□ -1.34
GPATCH4-216ENST00000531900 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
GPATCH4-216ENST00000531900 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
GPATCH4-216ENST00000531900 PSORS1C2Q9UIG4 136 aa6.67□□□□□ -1.34
GPATCH4-216ENST00000531900 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
GPATCH4-216ENST00000531900 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 COX17Q14061 63 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 TMEM170BQ5T4T1 132 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 ZNF625Q96I27 306 aaPredicted RBP6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HSPB8Q9UJY1 196 aa6.66□□□□□ -1.34
GPATCH4-216ENST00000531900 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
GPATCH4-216ENST00000531900 M0QXV9 152 aa6.64□□□□□ -1.35
GPATCH4-216ENST00000531900 COA6Q5JTJ3 125 aaKnown RBP6.64□□□□□ -1.35
GPATCH4-216ENST00000531900 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
GPATCH4-216ENST00000531900 KRTAP11-1Q8IUC1 163 aa6.64□□□□□ -1.35
GPATCH4-216ENST00000531900 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
GPATCH4-216ENST00000531900 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
GPATCH4-216ENST00000531900 C22orf24Q9Y442 160 aa6.63□□□□□ -1.35
GPATCH4-216ENST00000531900 PLNP26678 52 aa6.62□□□□□ -1.35
GPATCH4-216ENST00000531900 LBHQ53QV2 105 aaPredicted RBP6.62□□□□□ -1.35
GPATCH4-216ENST00000531900 LINC01600Q96MT4 127 aa6.62□□□□□ -1.35
GPATCH4-216ENST00000531900 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
GPATCH4-216ENST00000531900 IGLV7-43P04211 117 aa6.61□□□□□ -1.35
GPATCH4-216ENST00000531900 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
GPATCH4-216ENST00000531900 FABP4P15090 132 aa6.61□□□□□ -1.35
GPATCH4-216ENST00000531900 S100A1P23297 94 aa6.61□□□□□ -1.35
GPATCH4-216ENST00000531900 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
GPATCH4-216ENST00000531900 DPM2O94777 84 aa6.6□□□□□ -1.35
GPATCH4-216ENST00000531900 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-216ENST00000531900 MAP1LC3CQ9BXW4 147 aa6.6□□□□□ -1.35
GPATCH4-216ENST00000531900 PFN2P35080 140 aa6.59□□□□□ -1.35
GPATCH4-216ENST00000531900 HERV-K104P63124 156 aa6.59□□□□□ -1.35
GPATCH4-216ENST00000531900 UBE2BP63146 152 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms