RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
UBXN1-212ENST00000531625 HSPB8Q9UJY1 196 aa11.99□□□□□ -0.49
UBXN1-212ENST00000531625 HERVK_113P63121 156 aa11.98□□□□□ -0.49
UBXN1-212ENST00000531625 COA6Q5JTJ3 125 aaKnown RBP11.98□□□□□ -0.49
UBXN1-212ENST00000531625 FAM19A3Q7Z5A8 133 aa11.98□□□□□ -0.49
UBXN1-212ENST00000531625 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
UBXN1-212ENST00000531625 APOMO95445 188 aa11.97□□□□□ -0.49
UBXN1-212ENST00000531625 A0A087WZ39 114 aa11.96□□□□□ -0.49
UBXN1-212ENST00000531625 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
UBXN1-212ENST00000531625 H0Y8G0 127 aa11.96□□□□□ -0.49
UBXN1-212ENST00000531625 LINC00469Q8N7U9 141 aa11.96□□□□□ -0.49
UBXN1-212ENST00000531625 CDKN2A-AS1Q9UH64 79 aa11.95□□□□□ -0.5
UBXN1-212ENST00000531625 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
UBXN1-212ENST00000531625 ZNF561-AS1K7EIQ3 104 aa11.94□□□□□ -0.5
UBXN1-212ENST00000531625 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
UBXN1-212ENST00000531625 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
UBXN1-212ENST00000531625 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
UBXN1-212ENST00000531625 LINC00526Q96FQ7 95 aa11.94□□□□□ -0.5
UBXN1-212ENST00000531625 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
UBXN1-212ENST00000531625 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
UBXN1-212ENST00000531625 IGLV4-69A0A075B6H9 119 aa11.92□□□□□ -0.5
UBXN1-212ENST00000531625 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
UBXN1-212ENST00000531625 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
UBXN1-212ENST00000531625 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
UBXN1-212ENST00000531625 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-212ENST00000531625 S100A6P06703 90 aa11.91□□□□□ -0.5
UBXN1-212ENST00000531625 MAP1LC3CQ9BXW4 147 aa11.91□□□□□ -0.5
UBXN1-212ENST00000531625 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.5
UBXN1-212ENST00000531625 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
UBXN1-212ENST00000531625 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
UBXN1-212ENST00000531625 C11orf86A6NJI1 115 aa11.89□□□□□ -0.51
UBXN1-212ENST00000531625 F8VRH5 84 aa11.89□□□□□ -0.51
UBXN1-212ENST00000531625 H3BRM9 83 aa11.89□□□□□ -0.51
UBXN1-212ENST00000531625 ODF1Q14990 250 aa11.89□□□□□ -0.51
UBXN1-212ENST00000531625 STPG4Q8N801 248 aa11.89□□□□□ -0.51
UBXN1-212ENST00000531625 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
UBXN1-212ENST00000531625 SPINK8P0C7L1 97 aa11.88□□□□□ -0.51
UBXN1-212ENST00000531625 ZNF22P17026 224 aaPredicted RBP11.88□□□□□ -0.51
UBXN1-212ENST00000531625 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
UBXN1-212ENST00000531625 TOMM7Q9P0U1 55 aa11.88□□□□□ -0.51
UBXN1-212ENST00000531625 PRSS2P07478 247 aa11.87□□□□□ -0.51
UBXN1-212ENST00000531625 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
UBXN1-212ENST00000531625 REG3GQ6UW15 175 aa11.87□□□□□ -0.51
UBXN1-212ENST00000531625 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
UBXN1-212ENST00000531625 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
UBXN1-212ENST00000531625 SYCNQ0VAF6 134 aa11.86□□□□□ -0.51
UBXN1-212ENST00000531625 C2orf48Q96LS8 159 aa11.86□□□□□ -0.51
UBXN1-212ENST00000531625 CARD19Q96LW7 228 aa11.86□□□□□ -0.51
UBXN1-212ENST00000531625 SYS1-DBNDD2H3BUS1 97 aa11.85□□□□□ -0.51
UBXN1-212ENST00000531625 S100A2P29034 98 aa11.85□□□□□ -0.51
UBXN1-212ENST00000531625 HIST3H2BBQ8N257 126 aa11.85□□□□□ -0.51
UBXN1-212ENST00000531625 PMCHL2Q9BQD1 86 aa11.85□□□□□ -0.51
UBXN1-212ENST00000531625 LINC00474Q9P2X8 69 aa11.85□□□□□ -0.51
UBXN1-212ENST00000531625 A0A096LNI7 61 aa11.84□□□□□ -0.51
UBXN1-212ENST00000531625 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
UBXN1-212ENST00000531625 NDUFA1O15239 70 aa11.83□□□□□ -0.52
UBXN1-212ENST00000531625 PLNP26678 52 aa11.83□□□□□ -0.52
UBXN1-212ENST00000531625 KRTDAPP60985 99 aa11.83□□□□□ -0.52
UBXN1-212ENST00000531625 SNRPEP62304 92 aaKnown RBP11.83□□□□□ -0.52
UBXN1-212ENST00000531625 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
UBXN1-212ENST00000531625 C6orf226Q5I0X4 101 aa11.83□□□□□ -0.52
UBXN1-212ENST00000531625 PKIGQ9Y2B9 76 aa11.83□□□□□ -0.52
UBXN1-212ENST00000531625 F8WDY8 70 aa11.82□□□□□ -0.52
UBXN1-212ENST00000531625 DPM2O94777 84 aa11.82□□□□□ -0.52
UBXN1-212ENST00000531625 C3orf79P0CE67 100 aa11.82□□□□□ -0.52
UBXN1-212ENST00000531625 Q8IZM0 81 aa11.82□□□□□ -0.52
UBXN1-212ENST00000531625 CKS1BP61024 79 aa11.81□□□□□ -0.52
UBXN1-212ENST00000531625 PET117Q6UWS5 81 aa11.81□□□□□ -0.52
UBXN1-212ENST00000531625 C2orf82Q6UX34 121 aa11.81□□□□□ -0.52
UBXN1-212ENST00000531625 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
UBXN1-212ENST00000531625 IGKCP01834 107 aa11.8□□□□□ -0.52
UBXN1-212ENST00000531625 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
UBXN1-212ENST00000531625 UNQ6190/PRO20217Q6UXQ8 127 aa11.8□□□□□ -0.52
UBXN1-212ENST00000531625 Q6ZRP5 223 aa11.8□□□□□ -0.52
UBXN1-212ENST00000531625 HIST1H2BLQ99880 126 aa11.8□□□□□ -0.52
UBXN1-212ENST00000531625 IGLV5-39A0A0G2JS06 123 aa11.79□□□□□ -0.52
UBXN1-212ENST00000531625 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
UBXN1-212ENST00000531625 C5orf52A6NGY3 159 aa11.77□□□□□ -0.53
UBXN1-212ENST00000531625 CXCL5P42830 114 aa11.77□□□□□ -0.53
UBXN1-212ENST00000531625 LINC01545Q5VT33 79 aa11.77□□□□□ -0.53
UBXN1-212ENST00000531625 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.53
UBXN1-212ENST00000531625 TMA7Q9Y2S6 64 aaKnown RBP11.77□□□□□ -0.53
UBXN1-212ENST00000531625 C20orf202A1L168 122 aa11.76□□□□□ -0.53
UBXN1-212ENST00000531625 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
UBXN1-212ENST00000531625 LPAP08519 4548 aa11.75□□□□□ -0.53
UBXN1-212ENST00000531625 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
UBXN1-212ENST00000531625 LOC107984640A0A0U1RRK4 108 aa11.74□□□□□ -0.53
UBXN1-212ENST00000531625 HERVK_113P61574 105 aa11.74□□□□□ -0.53
UBXN1-212ENST00000531625 RPL18AQ02543 176 aaKnown RBP11.73□□□□□ -0.53
UBXN1-212ENST00000531625 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
UBXN1-212ENST00000531625 C9orf116Q5BN46 136 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-212ENST00000531625 PTTG1IPP53801 180 aa11.71□□□□□ -0.53
UBXN1-212ENST00000531625 LEPROTO15243 131 aa11.69□□□□□ -0.54
UBXN1-212ENST00000531625 PLEKHB2Q96CS7 222 aa11.69□□□□□ -0.54
UBXN1-212ENST00000531625 TLX1NBP0CAT3 122 aa11.68□□□□□ -0.54
UBXN1-212ENST00000531625 NDUFC2-KCTD14E9PQ53 114 aa11.67□□□□□ -0.54
UBXN1-212ENST00000531625 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
UBXN1-212ENST00000531625 SFTA2Q6UW10 78 aa11.67□□□□□ -0.54
UBXN1-212ENST00000531625 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
UBXN1-212ENST00000531625 ZNF625Q96I27 306 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms