RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
SCN4B-205ENST00000531550 SCGB1D1O95968 90 aa11.55□□□□□ -0.56
SCN4B-205ENST00000531550 HERVK_113P63121 156 aa11.55□□□□□ -0.56
SCN4B-205ENST00000531550 PMCHL2Q9BQD1 86 aa11.55□□□□□ -0.56
SCN4B-205ENST00000531550 C11orf86A6NJI1 115 aa11.54□□□□□ -0.56
SCN4B-205ENST00000531550 PANO1I0J062 215 aa11.54□□□□□ -0.56
SCN4B-205ENST00000531550 IGKCP01834 107 aa11.54□□□□□ -0.56
SCN4B-205ENST00000531550 GEMIN7Q9H840 131 aaKnown RBP11.54□□□□□ -0.56
SCN4B-205ENST00000531550 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
SCN4B-205ENST00000531550 COX6A2Q02221 97 aa11.53□□□□□ -0.56
SCN4B-205ENST00000531550 PYY3Q5JQD4 70 aa11.53□□□□□ -0.56
SCN4B-205ENST00000531550 CD164L2Q6UWJ8 174 aa11.53□□□□□ -0.56
SCN4B-205ENST00000531550 C9orf163Q8N9P6 203 aa11.53□□□□□ -0.56
SCN4B-205ENST00000531550 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
SCN4B-205ENST00000531550 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
SCN4B-205ENST00000531550 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
SCN4B-205ENST00000531550 ZNF22P17026 224 aaPredicted RBP11.51□□□□□ -0.57
SCN4B-205ENST00000531550 KRTAP26-1Q6PEX3 210 aa11.51□□□□□ -0.57
SCN4B-205ENST00000531550 XCL1P47992 114 aa11.5□□□□□ -0.57
SCN4B-205ENST00000531550 LINC01561Q8N1V8 128 aa11.5□□□□□ -0.57
SCN4B-205ENST00000531550 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
SCN4B-205ENST00000531550 FOXI1Q12951 378 aa11.49□□□□□ -0.57
SCN4B-205ENST00000531550 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
SCN4B-205ENST00000531550 A0A087WZ39 114 aa11.48□□□□□ -0.57
SCN4B-205ENST00000531550 GAGE12HA6NDE8 117 aa11.48□□□□□ -0.57
SCN4B-205ENST00000531550 H3BRM9 83 aa11.48□□□□□ -0.57
SCN4B-205ENST00000531550 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
SCN4B-205ENST00000531550 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
SCN4B-205ENST00000531550 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
SCN4B-205ENST00000531550 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
SCN4B-205ENST00000531550 COX7A2LO14548 114 aa11.46□□□□□ -0.57
SCN4B-205ENST00000531550 SMIM6P0DI80 62 aa11.46□□□□□ -0.57
SCN4B-205ENST00000531550 CIRBPQ14011 172 aaKnown RBP11.46□□□□□ -0.57
SCN4B-205ENST00000531550 C5orf38Q86SI9 138 aa11.45□□□□□ -0.58
SCN4B-205ENST00000531550 HERVK_113P61574 105 aa11.43□□□□□ -0.58
SCN4B-205ENST00000531550 STPG4Q8N801 248 aa11.43□□□□□ -0.58
SCN4B-205ENST00000531550 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
SCN4B-205ENST00000531550 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
SCN4B-205ENST00000531550 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
SCN4B-205ENST00000531550 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
SCN4B-205ENST00000531550 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
SCN4B-205ENST00000531550 E9PLD3 99 aa11.41□□□□□ -0.58
SCN4B-205ENST00000531550 APOMO95445 188 aa11.41□□□□□ -0.58
SCN4B-205ENST00000531550 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
SCN4B-205ENST00000531550 MALP21145 153 aa11.41□□□□□ -0.58
SCN4B-205ENST00000531550 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
SCN4B-205ENST00000531550 IGHV3-64A0A075B6Q5 118 aa11.4□□□□□ -0.58
SCN4B-205ENST00000531550 A0A087WYN8 130 aa11.4□□□□□ -0.58
SCN4B-205ENST00000531550 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
SCN4B-205ENST00000531550 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
SCN4B-205ENST00000531550 VAMP8Q9BV40 100 aa11.4□□□□□ -0.58
SCN4B-205ENST00000531550 LEPROTO15243 131 aa11.39□□□□□ -0.59
SCN4B-205ENST00000531550 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
SCN4B-205ENST00000531550 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
SCN4B-205ENST00000531550 S100A12P80511 92 aa11.38□□□□□ -0.59
SCN4B-205ENST00000531550 SPACA4Q8TDM5 124 aa11.38□□□□□ -0.59
SCN4B-205ENST00000531550 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
SCN4B-205ENST00000531550 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
SCN4B-205ENST00000531550 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
SCN4B-205ENST00000531550 Q8IZM0 81 aa11.36□□□□□ -0.59
SCN4B-205ENST00000531550 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
SCN4B-205ENST00000531550 ORAOV1Q8WV07 137 aa11.36□□□□□ -0.59
SCN4B-205ENST00000531550 PAM16Q9Y3D7 125 aa11.36□□□□□ -0.59
SCN4B-205ENST00000531550 IGKV2D-26A0A0A0MRZ7 120 aa11.35□□□□□ -0.59
SCN4B-205ENST00000531550 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
SCN4B-205ENST00000531550 SPATA45Q537H7 98 aa11.35□□□□□ -0.59
SCN4B-205ENST00000531550 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
SCN4B-205ENST00000531550 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
SCN4B-205ENST00000531550 PLAC8Q9NZF1 115 aa11.35□□□□□ -0.59
SCN4B-205ENST00000531550 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
SCN4B-205ENST00000531550 J3QQQ9 107 aa11.34□□□□□ -0.59
SCN4B-205ENST00000531550 SLPIP03973 132 aa11.34□□□□□ -0.59
SCN4B-205ENST00000531550 C7orf33Q8WU49 177 aa11.34□□□□□ -0.59
SCN4B-205ENST00000531550 C12orf57Q99622 126 aa11.34□□□□□ -0.59
SCN4B-205ENST00000531550 GVQW2A0A096LPI5 108 aaPredicted RBP11.33□□□□□ -0.6
SCN4B-205ENST00000531550 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
SCN4B-205ENST00000531550 F8WDY8 70 aa11.32□□□□□ -0.6
SCN4B-205ENST00000531550 PRSS2P07478 247 aa11.32□□□□□ -0.6
SCN4B-205ENST00000531550 TSPEAR-AS2P59090 65 aa11.32□□□□□ -0.6
SCN4B-205ENST00000531550 SPAG11BQ08648 103 aa11.32□□□□□ -0.6
SCN4B-205ENST00000531550 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
SCN4B-205ENST00000531550 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
SCN4B-205ENST00000531550 CXCL5P42830 114 aa11.31□□□□□ -0.6
SCN4B-205ENST00000531550 NMUP48645 174 aa11.31□□□□□ -0.6
SCN4B-205ENST00000531550 PRR3P79522 188 aaKnown RBP11.31□□□□□ -0.6
SCN4B-205ENST00000531550 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
SCN4B-205ENST00000531550 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
SCN4B-205ENST00000531550 COX8AP10176 69 aa11.3□□□□□ -0.6
SCN4B-205ENST00000531550 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
SCN4B-205ENST00000531550 HIGD2BQ4VC39 106 aa11.29□□□□□ -0.6
SCN4B-205ENST00000531550 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
SCN4B-205ENST00000531550 MYMXA0A1B0GTQ4 84 aa11.28□□□□□ -0.6
SCN4B-205ENST00000531550 NDUFA1O15239 70 aa11.28□□□□□ -0.6
SCN4B-205ENST00000531550 DLEU1O43261 78 aa11.28□□□□□ -0.6
SCN4B-205ENST00000531550 PCP2Q8IVA1 136 aa11.28□□□□□ -0.6
SCN4B-205ENST00000531550 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
SCN4B-205ENST00000531550 KRTAP10-8P60410 259 aa11.27□□□□□ -0.61
SCN4B-205ENST00000531550 CKS1BP61024 79 aa11.27□□□□□ -0.61
SCN4B-205ENST00000531550 BOD1L2Q8IYS8 172 aa11.27□□□□□ -0.61
SCN4B-205ENST00000531550 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms