RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FDCSPQ8NFU4 85 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 TMEM14CQ9P0S9 112 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 PSORS1C2Q9UIG4 136 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 MYO16Q9Y6X6 1858 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 LMO7Q8WWI1 1683 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 UNC79Q9P2D8 2635 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 DDX60Q8IY21 1712 aaKnown RBP1.83□□□□□ -2.12
PTPRK-220ENST00000531466 TOGARAM1Q9Y4F4 1720 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 IGKV3-7A0A075B6H7 116 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 TRBV6-1A0A0K0K1D8 114 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 K7EMI3 77 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 PDE6GP18545 87 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 ENHOQ6UWT2 76 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 WFDC9Q8NEX5 89 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 PATE1Q8WXA2 126 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 TMEM167BQ9NRX6 74 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 DLEC1Q9Y238 1755 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 MED13Q9UHV7 2174 aa1.82□□□□□ -2.12
PTPRK-220ENST00000531466 PKD1L2Q7Z442 2459 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 DOT1LQ8TEK3 1739 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 TRAV21A0A0B4J279 112 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 M0R135 149 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 IL9P15248 144 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 DEFB114Q30KQ6 69 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 HCP5Q6MZN7 132 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 TTTY12Q9BZ98 90 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 SIP14410 1827 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 UBR3Q6ZT12 1888 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 PTPRSQ13332 1948 aa1.81□□□□□ -2.12
PTPRK-220ENST00000531466 BCORQ6W2J9 1755 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 CACNA1AO00555 2505 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 J3QRE1 110 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 M0R3E3 92 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 CTSGP08311 255 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 COX6B1P14854 86 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 KRTAP13-2Q52LG2 175 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 Q6ZTI0 123 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 WFDC10AQ9H1F0 79 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 KLK9Q9UKQ9 250 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 ZNF407Q9C0G0 2248 aa1.8□□□□□ -2.12
PTPRK-220ENST00000531466 ANKRD36A6QL64 1941 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 MYO7AQ13402 2215 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 TRBV6-4A0A1B0GX49 114 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 SPINK4O60575 86 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 ZCCHC13Q8WW36 166 aaKnown RBP1.79□□□□□ -2.12
PTPRK-220ENST00000531466 GAFA1Q96PS6 74 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 COL4A1P02462 1669 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 NRAPQ86VF7 1730 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 NRXN2Q9P2S2 1712 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 EML5Q05BV3 1969 aa1.79□□□□□ -2.12
PTPRK-220ENST00000531466 BAZ2BQ9UIF8 2168 aaKnown RBP1.78□□□□□ -2.12
PTPRK-220ENST00000531466 MYO7BQ6PIF6 2116 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 HEATR1Q9H583 2144 aaKnown RBP1.78□□□□□ -2.12
PTPRK-220ENST00000531466 MYOFQ9NZM1 2061 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 TRAV40A0A0B4J280 105 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 IGIPA6NJ69 53 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 I3L3M4 83 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 M0R1W7 72 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 ZNF137PP52743 207 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 LINC00322Q6ZN03 302 aaPredicted RBP1.78□□□□□ -2.12
PTPRK-220ENST00000531466 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 SPRR4Q96PI1 79 aa1.78□□□□□ -2.12
PTPRK-220ENST00000531466 KIAA0100Q14667 2235 aaKnown RBP1.78□□□□□ -2.13
PTPRK-220ENST00000531466 FREM3P0C091 2139 aa1.78□□□□□ -2.13
PTPRK-220ENST00000531466 KIAA1549Q9HCM3 1950 aa1.78□□□□□ -2.13
PTPRK-220ENST00000531466 A0A0G2JMZ2 1700 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 LRRC37A2A6NM11 1700 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 LRRC37AA6NMS7 1700 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 IGKV2-40A0A087WW87 121 aaPredicted RBP1.77□□□□□ -2.13
PTPRK-220ENST00000531466 TRGV4A0A0C4DH28 118 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 IGKV3OR2-268A0A0C4DH90 116 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 H0YGX0 51 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 IGKV2D-40P01614 121 aaPredicted RBP1.77□□□□□ -2.13
PTPRK-220ENST00000531466 RPL37AP61513 92 aaKnown RBP1.77□□□□□ -2.13
PTPRK-220ENST00000531466 FXYD3Q14802 87 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 SPATA8Q6RVD6 105 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 DEFB132Q7Z7B7 95 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 TIMM8BQ9Y5J9 83 aaPredicted RBP1.77□□□□□ -2.13
PTPRK-220ENST00000531466 SHROOM3Q8TF72 1996 aa1.77□□□□□ -2.13
PTPRK-220ENST00000531466 MALRD1Q5VYJ5 2156 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 LOC110117498A0A087WWA1 95 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 NDUFA4O00483 81 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 IGLV3-1P01715 115 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 DEFB112Q30KQ8 113 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 C4AP0C0L4 1744 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 HEATR5BQ9P2D3 2071 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 CUL9Q8IWT3 2517 aa1.76□□□□□ -2.13
PTPRK-220ENST00000531466 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
PTPRK-220ENST00000531466 INTS1Q8N201 2190 aaKnown RBP1.75□□□□□ -2.13
PTPRK-220ENST00000531466 PI4KAP42356 2102 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 MPDZO75970 2070 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 CEP350Q5VT06 3117 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 A0A1W2PNN7 141 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 PIN1P1O15428 100 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 NDUFA3O95167 84 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms