RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ORMDL3Q8N138 153 aa12.16□□□□□ -0.46
CHKA-206ENST00000531341 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
CHKA-206ENST00000531341 C2orf88Q9BSF0 95 aa12.16□□□□□ -0.46
CHKA-206ENST00000531341 IGLV7-46A0A075B6I9 117 aa12.15□□□□□ -0.46
CHKA-206ENST00000531341 GAGE10A6NGK3 116 aa12.15□□□□□ -0.46
CHKA-206ENST00000531341 LINC00304Q8N9R0 145 aa12.15□□□□□ -0.46
CHKA-206ENST00000531341 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
CHKA-206ENST00000531341 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
CHKA-206ENST00000531341 VCX2Q9H322 139 aa12.13□□□□□ -0.47
CHKA-206ENST00000531341 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
CHKA-206ENST00000531341 FSIP2Q5CZC0 6907 aa12.13□□□□□ -0.47
CHKA-206ENST00000531341 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
CHKA-206ENST00000531341 F8VRH5 84 aa12.12□□□□□ -0.47
CHKA-206ENST00000531341 S100A8P05109 93 aa12.12□□□□□ -0.47
CHKA-206ENST00000531341 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
CHKA-206ENST00000531341 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
CHKA-206ENST00000531341 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
CHKA-206ENST00000531341 FAM229BQ4G0N7 80 aa12.1□□□□□ -0.47
CHKA-206ENST00000531341 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
CHKA-206ENST00000531341 SCO1O75880 301 aa12.08□□□□□ -0.48
CHKA-206ENST00000531341 UBE2AP49459 152 aa12.08□□□□□ -0.48
CHKA-206ENST00000531341 PNRC1Q12796 327 aaPredicted RBP12.07□□□□□ -0.48
CHKA-206ENST00000531341 Q8N8P6 123 aa12.07□□□□□ -0.48
CHKA-206ENST00000531341 PPDPFQ9H3Y8 114 aa12.07□□□□□ -0.48
CHKA-206ENST00000531341 MAP1LC3AQ9H492 121 aa12.06□□□□□ -0.48
CHKA-206ENST00000531341 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
CHKA-206ENST00000531341 HERVK_113P63121 156 aa12.05□□□□□ -0.48
CHKA-206ENST00000531341 AKAP14Q86UN6 197 aa12.05□□□□□ -0.48
CHKA-206ENST00000531341 IGLV5-37A0A075B6J1 123 aa12.04□□□□□ -0.48
CHKA-206ENST00000531341 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
CHKA-206ENST00000531341 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
CHKA-206ENST00000531341 RAB5BP61020 215 aa12.03□□□□□ -0.48
CHKA-206ENST00000531341 PRLHP81277 87 aa12.03□□□□□ -0.48
CHKA-206ENST00000531341 LCE2DQ5TA82 110 aaPredicted RBP12.03□□□□□ -0.48
CHKA-206ENST00000531341 ATP5L2Q7Z4Y8 100 aa12.03□□□□□ -0.48
CHKA-206ENST00000531341 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
CHKA-206ENST00000531341 NPSP0C0P6 89 aa12.02□□□□□ -0.49
CHKA-206ENST00000531341 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.49
CHKA-206ENST00000531341 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.49
CHKA-206ENST00000531341 CXCL5P42830 114 aa12.01□□□□□ -0.49
CHKA-206ENST00000531341 ORMDL2Q53FV1 153 aa12.01□□□□□ -0.49
CHKA-206ENST00000531341 KRTAP4-1Q9BYQ7 146 aa12.01□□□□□ -0.49
CHKA-206ENST00000531341 LAMTOR2Q9Y2Q5 125 aa12.01□□□□□ -0.49
CHKA-206ENST00000531341 SEC11AP67812 179 aa12□□□□□ -0.49
CHKA-206ENST00000531341 NKAPP1Q8N9T2 125 aa11.99□□□□□ -0.49
CHKA-206ENST00000531341 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
CHKA-206ENST00000531341 hCG_2014768A0A024R1R8 64 aa11.98□□□□□ -0.49
CHKA-206ENST00000531341 PEA15Q15121 130 aa11.98□□□□□ -0.49
CHKA-206ENST00000531341 TMEM238C9JI98 176 aa11.97□□□□□ -0.49
CHKA-206ENST00000531341 CTAG1AP78358 180 aa11.97□□□□□ -0.49
CHKA-206ENST00000531341 CRCT1Q9UGL9 99 aa11.97□□□□□ -0.49
CHKA-206ENST00000531341 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.49
CHKA-206ENST00000531341 FAM19A1Q7Z5A9 133 aa11.96□□□□□ -0.49
CHKA-206ENST00000531341 PLEKHB2Q96CS7 222 aa11.96□□□□□ -0.49
CHKA-206ENST00000531341 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
CHKA-206ENST00000531341 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
CHKA-206ENST00000531341 SPINK8P0C7L1 97 aa11.94□□□□□ -0.5
CHKA-206ENST00000531341 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
CHKA-206ENST00000531341 TOMM6Q96B49 74 aa11.94□□□□□ -0.5
CHKA-206ENST00000531341 K7EMI3 77 aa11.93□□□□□ -0.5
CHKA-206ENST00000531341 LINC01547P58512 204 aaPredicted RBP11.93□□□□□ -0.5
CHKA-206ENST00000531341 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
CHKA-206ENST00000531341 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
CHKA-206ENST00000531341 TINCRA0A1B0GVN0 87 aa11.92□□□□□ -0.5
CHKA-206ENST00000531341 M0R378 163 aa11.92□□□□□ -0.5
CHKA-206ENST00000531341 KRTAP13-3Q3SY46 172 aa11.92□□□□□ -0.5
CHKA-206ENST00000531341 ASB16-AS1Q495Z4 193 aa11.92□□□□□ -0.5
CHKA-206ENST00000531341 VPREB1P12018 145 aa11.9□□□□□ -0.5
CHKA-206ENST00000531341 Q8NDZ9 215 aa11.9□□□□□ -0.5
CHKA-206ENST00000531341 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
CHKA-206ENST00000531341 PFN2P35080 140 aa11.89□□□□□ -0.51
CHKA-206ENST00000531341 ERASQ7Z444 233 aa11.89□□□□□ -0.51
CHKA-206ENST00000531341 SCGB3A1Q96QR1 104 aa11.89□□□□□ -0.51
CHKA-206ENST00000531341 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
CHKA-206ENST00000531341 CBLN2Q8IUK8 224 aa11.88□□□□□ -0.51
CHKA-206ENST00000531341 LINC00337Q8N6G1 96 aa11.88□□□□□ -0.51
CHKA-206ENST00000531341 SPAG11AQ6PDA7 123 aa11.87□□□□□ -0.51
CHKA-206ENST00000531341 DAND5Q8N907 189 aa11.85□□□□□ -0.51
CHKA-206ENST00000531341 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
CHKA-206ENST00000531341 CST9LQ9H4G1 147 aa11.85□□□□□ -0.51
CHKA-206ENST00000531341 SND1-IT1Q9HBX3 110 aa11.85□□□□□ -0.51
CHKA-206ENST00000531341 ATP5LO75964 103 aa11.84□□□□□ -0.51
CHKA-206ENST00000531341 G0S2P27469 103 aa11.84□□□□□ -0.51
CHKA-206ENST00000531341 KIAA1644Q3SXP7 199 aa11.84□□□□□ -0.51
CHKA-206ENST00000531341 SPRR4Q96PI1 79 aa11.83□□□□□ -0.52
CHKA-206ENST00000531341 RAB14P61106 215 aa11.82□□□□□ -0.52
CHKA-206ENST00000531341 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
CHKA-206ENST00000531341 Q8NBF4 154 aa11.8□□□□□ -0.52
CHKA-206ENST00000531341 C4orf48Q5BLP8 95 aa11.79□□□□□ -0.52
CHKA-206ENST00000531341 LCE2CQ5TA81 110 aa11.79□□□□□ -0.52
CHKA-206ENST00000531341 ANAPC16Q96DE5 110 aa11.79□□□□□ -0.52
CHKA-206ENST00000531341 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
CHKA-206ENST00000531341 MT-ND4LP03901 98 aa11.78□□□□□ -0.52
CHKA-206ENST00000531341 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
CHKA-206ENST00000531341 ZNF625Q96I27 306 aaPredicted RBP11.78□□□□□ -0.52
CHKA-206ENST00000531341 MRPL18Q9H0U6 180 aaKnown RBP11.78□□□□□ -0.52
CHKA-206ENST00000531341 IGLV5-39A0A0G2JS06 123 aa11.77□□□□□ -0.53
CHKA-206ENST00000531341 SEC61BP60468 96 aaKnown RBP11.77□□□□□ -0.53
CHKA-206ENST00000531341 PMVKQ15126 192 aa11.77□□□□□ -0.53
CHKA-206ENST00000531341 H3BRM9 83 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms