RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RS1O15537 224 aa6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 DAZ4Q86SG3 579 aaKnown RBP6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 C20orf203Q8NBC4 194 aa6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 CST9LQ9H4G1 147 aa6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 DAZ3Q9NR90 486 aaKnown RBP6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 PYGO1Q9Y3Y4 419 aa6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 SPCS1Q9Y6A9 102 aa6.01□□□□□ -1.45
CHMP4A-205ENST00000531158 TRBV6-4A0A1B0GX49 114 aa6□□□□□ -1.45
CHMP4A-205ENST00000531158 ZNF815PA8K554 130 aa6□□□□□ -1.45
CHMP4A-205ENST00000531158 K7ERU9 68 aa6□□□□□ -1.45
CHMP4A-205ENST00000531158 HIST1H4GQ99525 98 aa6□□□□□ -1.45
CHMP4A-205ENST00000531158 GTSF1LQ9H1H1 148 aa6□□□□□ -1.45
CHMP4A-205ENST00000531158 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
CHMP4A-205ENST00000531158 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
CHMP4A-205ENST00000531158 TNXBP22105 4242 aa5.99□□□□□ -1.45
CHMP4A-205ENST00000531158 RBX1P62877 108 aa5.99□□□□□ -1.45
CHMP4A-205ENST00000531158 RPL39P62891 51 aaKnown RBP5.99□□□□□ -1.45
CHMP4A-205ENST00000531158 ATP6V0E2Q8NHE4 81 aa5.99□□□□□ -1.45
CHMP4A-205ENST00000531158 RAB37Q96AX2 223 aa5.99□□□□□ -1.45
CHMP4A-205ENST00000531158 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
CHMP4A-205ENST00000531158 OCIAD2Q56VL3 154 aa5.98□□□□□ -1.45
CHMP4A-205ENST00000531158 SCGB1D4Q6XE38 83 aa5.98□□□□□ -1.45
CHMP4A-205ENST00000531158 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
CHMP4A-205ENST00000531158 IGLV4-3A0A075B6K6 122 aa5.97□□□□□ -1.45
CHMP4A-205ENST00000531158 K7ERJ3 54 aa5.97□□□□□ -1.45
CHMP4A-205ENST00000531158 LEPROTO15243 131 aa5.97□□□□□ -1.45
CHMP4A-205ENST00000531158 LYRM7Q5U5X0 104 aa5.97□□□□□ -1.45
CHMP4A-205ENST00000531158 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
CHMP4A-205ENST00000531158 TRAV8-3A0A0A6YYJ7 113 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 TMEM223A0PJW6 202 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 GAGE12JA6NER3 117 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 ZNF22P17026 224 aaPredicted RBP5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 LGALS3P17931 250 aaKnown RBP5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 UBE2D1P51668 147 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 GAGE4Q13068 117 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 GAGE5Q13069 117 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 GAGE13Q4V321 117 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 TMEM170BQ5T4T1 132 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 AMELXQ99217 191 aa5.96□□□□□ -1.46
CHMP4A-205ENST00000531158 J3QQQ9 107 aa5.95□□□□□ -1.46
CHMP4A-205ENST00000531158 CIDEAO60543 219 aa5.95□□□□□ -1.46
CHMP4A-205ENST00000531158 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
CHMP4A-205ENST00000531158 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
CHMP4A-205ENST00000531158 TIMM21Q9BVV7 248 aa5.95□□□□□ -1.46
CHMP4A-205ENST00000531158 VCX2Q9H322 139 aa5.95□□□□□ -1.46
CHMP4A-205ENST00000531158 TSPEAR-AS2P59090 65 aa5.94□□□□□ -1.46
CHMP4A-205ENST00000531158 IGKV2D-24A0A075B6R9 120 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 TRBV10-1A0A0K0K1A3 114 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 TINCRA0A1B0GVN0 87 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 F8W1H4 67 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 PANO1I0J062 215 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 SRSF9Q13242 221 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 COTL1Q14019 142 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 CHCHD7Q9BUK0 85 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 KLK12Q9UKR0 248 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
CHMP4A-205ENST00000531158 TMEM238C9JI98 176 aa5.92□□□□□ -1.46
CHMP4A-205ENST00000531158 RPL37AP61513 92 aaKnown RBP5.92□□□□□ -1.46
CHMP4A-205ENST00000531158 SMAGPQ0VAQ4 97 aa5.92□□□□□ -1.46
CHMP4A-205ENST00000531158 UBE2WQ96B02 151 aa5.92□□□□□ -1.46
CHMP4A-205ENST00000531158 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
CHMP4A-205ENST00000531158 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 A0A0B4J2C4 111 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 TSPAN13O95857 204 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 UBE2D3P61077 147 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 UBE2D2P62837 147 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 ENHOQ6UWT2 76 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 FAM104AQ969W3 186 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 OPRPNQ99935 248 aaPredicted RBP5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 VPS25Q9BRG1 176 aa5.91□□□□□ -1.46
CHMP4A-205ENST00000531158 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 IGHV1-58A0A0C4DH39 117 aa5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 A0A0J9YXV3 536 aa5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 RPL24P83731 157 aaKnown RBP5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 Q6ZUT4 128 aa5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 FAM19A3Q7Z5A8 133 aa5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 CSDC2Q9Y534 153 aaKnown RBP5.9□□□□□ -1.46
CHMP4A-205ENST00000531158 TRBV20-1A0A075B6N2 111 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 J3QR89 54 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 TIMM17BO60830 172 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 RPL36AP83881 106 aaKnown RBP5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 RNF151Q2KHN1 245 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 RPL36ALQ969Q0 106 aaKnown RBP5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 RMI2Q96E14 147 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 SPANXDQ9BXN6 97 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 SPANXCQ9NY87 97 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
CHMP4A-205ENST00000531158 A0A0J9YXY3 114 aa5.88□□□□□ -1.47
CHMP4A-205ENST00000531158 HERVK_113P63121 156 aa5.88□□□□□ -1.47
CHMP4A-205ENST00000531158 KRTAP26-1Q6PEX3 210 aa5.88□□□□□ -1.47
CHMP4A-205ENST00000531158 PRO1854Q9UHT4 67 aa5.88□□□□□ -1.47
CHMP4A-205ENST00000531158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 IGKV2-29A2NJV5 120 aaPredicted RBP5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 USP17L23D6RBM5 183 aa5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 H3BMG7 143 aa5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 H7C423 109 aa5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 M0QXV9 152 aa5.87□□□□□ -1.47
CHMP4A-205ENST00000531158 APOMO95445 188 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms