RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 PROK1P58294 105 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 Q6ZSV7 163 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 C11orf1Q9H5F2 150 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 COL4A2P08572 1712 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 MUC22E2RYF6 1773 aaPredicted RBP5.23□□□□□ -1.57
CTNND1-229ENST00000531014 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 PHF3Q92576 2039 aaKnown RBP5.23□□□□□ -1.57
CTNND1-229ENST00000531014 LY6G6CO95867 125 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 ZNF462Q96JM2 2506 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 C2CD3Q4AC94 2353 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 UQCR11O14957 56 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 DEFB114Q30KQ6 69 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 LINC01600Q96MT4 127 aa5.23□□□□□ -1.57
CTNND1-229ENST00000531014 EPG5Q9HCE0 2579 aa5.22□□□□□ -1.57
CTNND1-229ENST00000531014 P0C879 139 aa5.22□□□□□ -1.57
CTNND1-229ENST00000531014 CRIP1P50238 77 aa5.22□□□□□ -1.57
CTNND1-229ENST00000531014 MRGPRG-AS1Q2M3A8 158 aa5.22□□□□□ -1.57
CTNND1-229ENST00000531014 UNQ6190/PRO20217Q6UXQ8 127 aa5.22□□□□□ -1.57
CTNND1-229ENST00000531014 KPRPQ5T749 579 aaPredicted RBP5.22□□□□□ -1.57
CTNND1-229ENST00000531014 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
CTNND1-229ENST00000531014 ARHGAP32A7KAX9 2087 aa5.21□□□□□ -1.57
CTNND1-229ENST00000531014 IGLV2-18A0A075B6J9 118 aa5.21□□□□□ -1.57
CTNND1-229ENST00000531014 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.57
CTNND1-229ENST00000531014 FREM1Q5H8C1 2179 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 LINC00242Q5T6M2 205 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 Q8N7P7 452 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 SMIM1B2RUZ4 78 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 FSHBP01225 129 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 SPRNQ5BIV9 151 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 C2orf48Q96LS8 159 aa5.21□□□□□ -1.58
CTNND1-229ENST00000531014 IGIPA6NJ69 53 aa5.2□□□□□ -1.58
CTNND1-229ENST00000531014 A8MUN3 132 aa5.2□□□□□ -1.58
CTNND1-229ENST00000531014 IGLV2-14P01704 120 aa5.2□□□□□ -1.58
CTNND1-229ENST00000531014 C6orf223Q8N319 242 aa5.2□□□□□ -1.58
CTNND1-229ENST00000531014 PLXNB1O43157 2135 aa5.2□□□□□ -1.58
CTNND1-229ENST00000531014 PRR14LQ5THK1 2151 aa5.2□□□□□ -1.58
CTNND1-229ENST00000531014 ODF3BA8MYP8 253 aa5.19□□□□□ -1.58
CTNND1-229ENST00000531014 CHCHD7Q9BUK0 85 aa5.19□□□□□ -1.58
CTNND1-229ENST00000531014 M0R2N4 97 aa5.19□□□□□ -1.58
CTNND1-229ENST00000531014 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
CTNND1-229ENST00000531014 PRR3P79522 188 aaKnown RBP5.19□□□□□ -1.58
CTNND1-229ENST00000531014 PTPRBP23467 1997 aa5.19□□□□□ -1.58
CTNND1-229ENST00000531014 MYO18BQ8IUG5 2567 aa5.18□□□□□ -1.58
CTNND1-229ENST00000531014 KRTAP27-1Q3LI81 207 aa5.18□□□□□ -1.58
CTNND1-229ENST00000531014 A0A1B0GW54 56 aa5.18□□□□□ -1.58
CTNND1-229ENST00000531014 CDSNQ15517 529 aa5.18□□□□□ -1.58
CTNND1-229ENST00000531014 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 Q8N2B8 174 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 LOC101927531A0A1B0GV80 90 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 LINC01556Q5JQF7 62 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 ADAMTSL4-AS1Q5T5F5 129 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 LINC00337Q8N6G1 96 aa5.17□□□□□ -1.58
CTNND1-229ENST00000531014 ANKHD1Q8IWZ3 2542 aaKnown RBP5.16□□□□□ -1.58
CTNND1-229ENST00000531014 MUC4Q99102 2169 aa5.16□□□□□ -1.58
CTNND1-229ENST00000531014 IGLV2-11P01706 119 aa5.16□□□□□ -1.58
CTNND1-229ENST00000531014 APLNQ9ULZ1 77 aa5.16□□□□□ -1.58
CTNND1-229ENST00000531014 DSCAMO60469 2012 aa5.16□□□□□ -1.58
CTNND1-229ENST00000531014 TSPEAR-AS2P59090 65 aa5.16□□□□□ -1.58
CTNND1-229ENST00000531014 LRRK2Q5S007 2527 aa5.15□□□□□ -1.58
CTNND1-229ENST00000531014 KLLNB2CW77 178 aa5.15□□□□□ -1.58
CTNND1-229ENST00000531014 MED13Q9UHV7 2174 aa5.15□□□□□ -1.59
CTNND1-229ENST00000531014 CNFNQ9BYD5 112 aa5.15□□□□□ -1.59
CTNND1-229ENST00000531014 LINC01561Q8N1V8 128 aa5.15□□□□□ -1.59
CTNND1-229ENST00000531014 LRP4O75096 1905 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 WISP2O76076 250 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 ELOF1P60002 83 aaKnown RBP5.14□□□□□ -1.59
CTNND1-229ENST00000531014 COA5Q86WW8 74 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 C11orf21Q9P2W6 132 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 CCDC168Q8NDH2 2452 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 GAS8-AS1O95177 125 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 FAM19A4Q96LR4 140 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 PLXNB3Q9ULL4 1909 aa5.14□□□□□ -1.59
CTNND1-229ENST00000531014 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 H3BS24 57 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 COX6A2Q02221 97 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 NCKAP5O14513 1909 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 CSNK1G2-AS1Q8NCQ2 148 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 SMCR5Q8TEV8 140 aa5.13□□□□□ -1.59
CTNND1-229ENST00000531014 IGLV5-52A0A0A0MRZ9 124 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 C9orf129Q5T035 196 aaKnown RBP5.12□□□□□ -1.59
CTNND1-229ENST00000531014 PRR9Q5T870 116 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 ANKRD11Q6UB99 2663 aaPredicted RBP5.12□□□□□ -1.59
CTNND1-229ENST00000531014 KIAA0087Q14695 138 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 LINC00336Q6ZUF6 198 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 AMELXQ99217 191 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 TM2D3Q9BRN9 247 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 LINC00574Q9H8X3 128 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 EPM2AB3EWF7 344 aa5.12□□□□□ -1.59
CTNND1-229ENST00000531014 EML5Q05BV3 1969 aa5.11□□□□□ -1.59
CTNND1-229ENST00000531014 LINC00310P59036 64 aa5.11□□□□□ -1.59
CTNND1-229ENST00000531014 A8MTW9 85 aa5.11□□□□□ -1.59
CTNND1-229ENST00000531014 URB1-AS1Q96HZ7 61 aa5.1□□□□□ -1.59
CTNND1-229ENST00000531014 FHL2Q14192 279 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms