RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TOMM7Q9P0U1 55 aa9.81□□□□□ -0.84
CCS-206ENST00000530961 C11orf86A6NJI1 115 aa9.8□□□□□ -0.84
CCS-206ENST00000530961 CKS1BP61024 79 aa9.8□□□□□ -0.84
CCS-206ENST00000530961 APOBP04114 4563 aaKnown RBP9.79□□□□□ -0.84
CCS-206ENST00000530961 SPINK8P0C7L1 97 aa9.79□□□□□ -0.84
CCS-206ENST00000530961 CXCL5P42830 114 aa9.79□□□□□ -0.84
CCS-206ENST00000530961 ODF1Q14990 250 aa9.79□□□□□ -0.84
CCS-206ENST00000530961 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
CCS-206ENST00000530961 UNQ6190/PRO20217Q6UXQ8 127 aa9.79□□□□□ -0.84
CCS-206ENST00000530961 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
CCS-206ENST00000530961 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
CCS-206ENST00000530961 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
CCS-206ENST00000530961 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
CCS-206ENST00000530961 H0Y8G0 127 aa9.78□□□□□ -0.84
CCS-206ENST00000530961 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
CCS-206ENST00000530961 C10orf25Q5T742 122 aa9.78□□□□□ -0.84
CCS-206ENST00000530961 COX7B2Q8TF08 81 aa9.78□□□□□ -0.84
CCS-206ENST00000530961 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.85
CCS-206ENST00000530961 EPM2AB3EWF7 344 aa9.77□□□□□ -0.85
CCS-206ENST00000530961 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
CCS-206ENST00000530961 DPH3Q96FX2 82 aa9.77□□□□□ -0.85
CCS-206ENST00000530961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.77□□□□□ -0.85
CCS-206ENST00000530961 PLNP26678 52 aa9.76□□□□□ -0.85
CCS-206ENST00000530961 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
CCS-206ENST00000530961 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
CCS-206ENST00000530961 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
CCS-206ENST00000530961 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
CCS-206ENST00000530961 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
CCS-206ENST00000530961 A0A096LNI7 61 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 TMEM223A0PJW6 202 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 PANO1I0J062 215 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 DPM2O94777 84 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 CHTF8P0CG12 524 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 PTTG1IPP53801 180 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 HAMPP81172 84 aa9.74□□□□□ -0.85
CCS-206ENST00000530961 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
CCS-206ENST00000530961 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
CCS-206ENST00000530961 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
CCS-206ENST00000530961 PET117Q6UWS5 81 aa9.73□□□□□ -0.85
CCS-206ENST00000530961 MYCBP2O75592 4640 aa9.72□□□□□ -0.85
CCS-206ENST00000530961 IGKCP01834 107 aa9.72□□□□□ -0.85
CCS-206ENST00000530961 S100A6P06703 90 aa9.72□□□□□ -0.85
CCS-206ENST00000530961 RPL18AQ02543 176 aaKnown RBP9.72□□□□□ -0.85
CCS-206ENST00000530961 A0A087WYN8 130 aa9.71□□□□□ -0.86
CCS-206ENST00000530961 NDUFC2-KCTD14E9PQ53 114 aa9.71□□□□□ -0.86
CCS-206ENST00000530961 PLAC8Q9NZF1 115 aa9.71□□□□□ -0.86
CCS-206ENST00000530961 J3QL48 77 aa9.7□□□□□ -0.86
CCS-206ENST00000530961 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
CCS-206ENST00000530961 Q6ZRP5 223 aa9.7□□□□□ -0.86
CCS-206ENST00000530961 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
CCS-206ENST00000530961 C3orf79P0CE67 100 aa9.69□□□□□ -0.86
CCS-206ENST00000530961 S100A2P29034 98 aa9.69□□□□□ -0.86
CCS-206ENST00000530961 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
CCS-206ENST00000530961 STPG4Q8N801 248 aa9.69□□□□□ -0.86
CCS-206ENST00000530961 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
CCS-206ENST00000530961 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
CCS-206ENST00000530961 KRTDAPP60985 99 aa9.68□□□□□ -0.86
CCS-206ENST00000530961 HERVK_113P61574 105 aa9.68□□□□□ -0.86
CCS-206ENST00000530961 HIST3H2BBQ8N257 126 aa9.68□□□□□ -0.86
CCS-206ENST00000530961 GAGE2EQ4V326 116 aa9.67□□□□□ -0.86
CCS-206ENST00000530961 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
CCS-206ENST00000530961 GAGE2DQ9UEU5 116 aa9.67□□□□□ -0.86
CCS-206ENST00000530961 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
CCS-206ENST00000530961 C20orf202A1L168 122 aa9.66□□□□□ -0.86
CCS-206ENST00000530961 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
CCS-206ENST00000530961 ZNF625Q96I27 306 aaPredicted RBP9.66□□□□□ -0.86
CCS-206ENST00000530961 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.86
CCS-206ENST00000530961 AKR1D1P51857 326 aa9.65□□□□□ -0.86
CCS-206ENST00000530961 COX17Q14061 63 aa9.65□□□□□ -0.86
CCS-206ENST00000530961 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
CCS-206ENST00000530961 HIST1H2BLQ99880 126 aa9.65□□□□□ -0.86
CCS-206ENST00000530961 LEPROTO15243 131 aa9.64□□□□□ -0.87
CCS-206ENST00000530961 SNRPEP62304 92 aaKnown RBP9.64□□□□□ -0.87
CCS-206ENST00000530961 A0A1W2PNN7 141 aa9.63□□□□□ -0.87
CCS-206ENST00000530961 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
CCS-206ENST00000530961 HERV-K104P63124 156 aa9.63□□□□□ -0.87
CCS-206ENST00000530961 Q5VSD8 79 aa9.63□□□□□ -0.87
CCS-206ENST00000530961 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
CCS-206ENST00000530961 FAT1Q14517 4588 aa9.62□□□□□ -0.87
CCS-206ENST00000530961 MYMXA0A1B0GTQ4 84 aa9.62□□□□□ -0.87
CCS-206ENST00000530961 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
CCS-206ENST00000530961 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
CCS-206ENST00000530961 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
CCS-206ENST00000530961 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
CCS-206ENST00000530961 E9PLD3 99 aa9.61□□□□□ -0.87
CCS-206ENST00000530961 J3QQQ9 107 aa9.61□□□□□ -0.87
CCS-206ENST00000530961 PFN2P35080 140 aa9.61□□□□□ -0.87
CCS-206ENST00000530961 NMUP48645 174 aa9.61□□□□□ -0.87
CCS-206ENST00000530961 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
CCS-206ENST00000530961 LGALS3P17931 250 aaKnown RBP9.6□□□□□ -0.87
CCS-206ENST00000530961 XAGE1AQ9HD64 81 aa9.6□□□□□ -0.87
CCS-206ENST00000530961 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
CCS-206ENST00000530961 FAM168BA1KXE4 195 aa9.57□□□□□ -0.88
CCS-206ENST00000530961 LINC00158P58513 81 aa9.57□□□□□ -0.88
CCS-206ENST00000530961 RPL37AP61513 92 aaKnown RBP9.57□□□□□ -0.88
CCS-206ENST00000530961 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
CCS-206ENST00000530961 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
CCS-206ENST00000530961 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms