RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 IGKV2-28A0A075B6P5 120 aa11.89□□□□□ -0.51
BRCA2-204ENST00000530893 IGKV2D-28P01615 120 aa11.89□□□□□ -0.51
BRCA2-204ENST00000530893 ATP5G1P05496 136 aa11.89□□□□□ -0.51
BRCA2-204ENST00000530893 CCL18P55774 89 aa11.89□□□□□ -0.51
BRCA2-204ENST00000530893 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
BRCA2-204ENST00000530893 LINC00337Q8N6G1 96 aa11.89□□□□□ -0.51
BRCA2-204ENST00000530893 Q8NAQ8 132 aa11.89□□□□□ -0.51
BRCA2-204ENST00000530893 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
BRCA2-204ENST00000530893 A0A096LPF7 62 aa11.87□□□□□ -0.51
BRCA2-204ENST00000530893 A0A1B0GV72 72 aa11.87□□□□□ -0.51
BRCA2-204ENST00000530893 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
BRCA2-204ENST00000530893 SPART-AS1P0CW21 52 aa11.86□□□□□ -0.51
BRCA2-204ENST00000530893 PFN2P35080 140 aa11.86□□□□□ -0.51
BRCA2-204ENST00000530893 CXCL5P42830 114 aa11.86□□□□□ -0.51
BRCA2-204ENST00000530893 VWFP04275 2813 aa11.85□□□□□ -0.51
BRCA2-204ENST00000530893 DEFB4AO15263 64 aa11.85□□□□□ -0.51
BRCA2-204ENST00000530893 LINC00269Q8N2A0 174 aa11.85□□□□□ -0.51
BRCA2-204ENST00000530893 H0YGX0 51 aa11.84□□□□□ -0.51
BRCA2-204ENST00000530893 SNCGO76070 127 aa11.84□□□□□ -0.51
BRCA2-204ENST00000530893 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
BRCA2-204ENST00000530893 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
BRCA2-204ENST00000530893 COX17Q14061 63 aa11.84□□□□□ -0.51
BRCA2-204ENST00000530893 CKS1BP61024 79 aa11.83□□□□□ -0.52
BRCA2-204ENST00000530893 REG3AQ06141 175 aa11.83□□□□□ -0.52
BRCA2-204ENST00000530893 CLPSL2Q6UWE3 100 aa11.83□□□□□ -0.52
BRCA2-204ENST00000530893 ANGP03950 147 aaKnown RBP11.82□□□□□ -0.52
BRCA2-204ENST00000530893 ACYP1P07311 99 aa11.82□□□□□ -0.52
BRCA2-204ENST00000530893 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
BRCA2-204ENST00000530893 CHCHD10Q8WYQ3 142 aaPredicted RBP11.82□□□□□ -0.52
BRCA2-204ENST00000530893 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
BRCA2-204ENST00000530893 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
BRCA2-204ENST00000530893 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
BRCA2-204ENST00000530893 IGHV4-30-4P0DP06 118 aa11.81□□□□□ -0.52
BRCA2-204ENST00000530893 LELP1Q5T871 98 aa11.81□□□□□ -0.52
BRCA2-204ENST00000530893 KIAA0087Q14695 138 aa11.81□□□□□ -0.52
BRCA2-204ENST00000530893 CFAP161Q6P656 301 aa11.81□□□□□ -0.52
BRCA2-204ENST00000530893 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
BRCA2-204ENST00000530893 NBEAL2Q6ZNJ1 2754 aa11.8□□□□□ -0.52
BRCA2-204ENST00000530893 Q6Q795 121 aa11.8□□□□□ -0.52
BRCA2-204ENST00000530893 MALP21145 153 aa11.79□□□□□ -0.52
BRCA2-204ENST00000530893 DNAL4O96015 105 aa11.78□□□□□ -0.52
BRCA2-204ENST00000530893 GAGE2BQ13066 116 aa11.78□□□□□ -0.52
BRCA2-204ENST00000530893 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
BRCA2-204ENST00000530893 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
BRCA2-204ENST00000530893 NDUFC2O95298 119 aa11.77□□□□□ -0.52
BRCA2-204ENST00000530893 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.52
BRCA2-204ENST00000530893 TENM1Q9UKZ4 2725 aa11.77□□□□□ -0.52
BRCA2-204ENST00000530893 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
BRCA2-204ENST00000530893 MUC7Q8TAX7 377 aa11.77□□□□□ -0.53
BRCA2-204ENST00000530893 OR13C6PQ8NH95 151 aa11.76□□□□□ -0.53
BRCA2-204ENST00000530893 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
BRCA2-204ENST00000530893 KLK5Q9Y337 293 aaPredicted RBP11.75□□□□□ -0.53
BRCA2-204ENST00000530893 C22orf24Q9Y442 160 aa11.75□□□□□ -0.53
BRCA2-204ENST00000530893 TEP1Q99973 2627 aaKnown RBP11.74□□□□□ -0.53
BRCA2-204ENST00000530893 IGLV10-54A0A075B6I4 117 aa11.74□□□□□ -0.53
BRCA2-204ENST00000530893 HIVEP1P15822 2718 aa11.74□□□□□ -0.53
BRCA2-204ENST00000530893 HTN3P15516 51 aa11.74□□□□□ -0.53
BRCA2-204ENST00000530893 Q8N3U1 123 aa11.74□□□□□ -0.53
BRCA2-204ENST00000530893 Q9HAA7 133 aa11.74□□□□□ -0.53
BRCA2-204ENST00000530893 A0A087WYN8 130 aa11.73□□□□□ -0.53
BRCA2-204ENST00000530893 H3BNG1 76 aa11.72□□□□□ -0.53
BRCA2-204ENST00000530893 ATRQ13535 2644 aa11.71□□□□□ -0.53
BRCA2-204ENST00000530893 A0A1B0GX51 115 aa11.71□□□□□ -0.53
BRCA2-204ENST00000530893 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
BRCA2-204ENST00000530893 LYPD5Q6UWN5 251 aa11.69□□□□□ -0.54
BRCA2-204ENST00000530893 MAST4O15021 2626 aa11.69□□□□□ -0.54
BRCA2-204ENST00000530893 A0A0J9YWU9 116 aa11.69□□□□□ -0.54
BRCA2-204ENST00000530893 LECT2O14960 151 aa11.69□□□□□ -0.54
BRCA2-204ENST00000530893 TTC32Q5I0X7 151 aa11.69□□□□□ -0.54
BRCA2-204ENST00000530893 ANAPC13Q9BS18 74 aa11.69□□□□□ -0.54
BRCA2-204ENST00000530893 SPAG11BQ08648 103 aa11.68□□□□□ -0.54
BRCA2-204ENST00000530893 TRBV7-7A0A0K0K1E9 115 aa11.67□□□□□ -0.54
BRCA2-204ENST00000530893 SDIM1Q6ZPB5 146 aa11.67□□□□□ -0.54
BRCA2-204ENST00000530893 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
BRCA2-204ENST00000530893 OBSCN-AS1Q96MR7 158 aa11.67□□□□□ -0.54
BRCA2-204ENST00000530893 IMUPQ9GZP8 106 aa11.67□□□□□ -0.54
BRCA2-204ENST00000530893 TRRAPQ9Y4A5 3859 aa11.67□□□□□ -0.54
BRCA2-204ENST00000530893 NDUFV3P56181 108 aaKnown RBP11.66□□□□□ -0.54
BRCA2-204ENST00000530893 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
BRCA2-204ENST00000530893 ENHOQ6UWT2 76 aa11.66□□□□□ -0.54
BRCA2-204ENST00000530893 LINC00643Q86TS7 51 aa11.65□□□□□ -0.54
BRCA2-204ENST00000530893 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
BRCA2-204ENST00000530893 LINC00167Q96N53 147 aa11.65□□□□□ -0.54
BRCA2-204ENST00000530893 ORMDL1Q9P0S3 153 aa11.65□□□□□ -0.54
BRCA2-204ENST00000530893 EGFEM1PQ0D2K5 195 aa11.64□□□□□ -0.55
BRCA2-204ENST00000530893 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
BRCA2-204ENST00000530893 OXLD1Q5BKU9 147 aa11.64□□□□□ -0.55
BRCA2-204ENST00000530893 UNQ6190/PRO20217Q6UXQ8 127 aa11.63□□□□□ -0.55
BRCA2-204ENST00000530893 KRTAP10-11P60412 298 aa11.62□□□□□ -0.55
BRCA2-204ENST00000530893 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
BRCA2-204ENST00000530893 KPRPQ5T749 579 aaPredicted RBP11.62□□□□□ -0.55
BRCA2-204ENST00000530893 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
BRCA2-204ENST00000530893 GAGE2AQ6NT46 116 aa11.61□□□□□ -0.55
BRCA2-204ENST00000530893 C6orf223Q8N319 242 aa11.61□□□□□ -0.55
BRCA2-204ENST00000530893 Q8N814 137 aa11.61□□□□□ -0.55
BRCA2-204ENST00000530893 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
BRCA2-204ENST00000530893 SMCR5Q8TEV8 140 aa11.6□□□□□ -0.55
BRCA2-204ENST00000530893 NHLRC4P0CG21 123 aaPredicted RBP11.59□□□□□ -0.55
BRCA2-204ENST00000530893 TMEM256-PLSCR3K7ERE1 68 aa11.58□□□□□ -0.56
BRCA2-204ENST00000530893 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms