RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 STPG4Q8N801 248 aa9.44□□□□□ -0.9
PPFIA1-216ENST00000530746 PACRGQ96M98 296 aaPredicted RBP9.44□□□□□ -0.9
PPFIA1-216ENST00000530746 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
PPFIA1-216ENST00000530746 PTTG1IPP53801 180 aa9.43□□□□□ -0.9
PPFIA1-216ENST00000530746 NDUFA6P56556 154 aa9.43□□□□□ -0.9
PPFIA1-216ENST00000530746 HERVK_113P63121 156 aa9.43□□□□□ -0.9
PPFIA1-216ENST00000530746 LINC01561Q8N1V8 128 aa9.43□□□□□ -0.9
PPFIA1-216ENST00000530746 IFI27L1Q96BM0 104 aa9.43□□□□□ -0.9
PPFIA1-216ENST00000530746 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
PPFIA1-216ENST00000530746 NDUFA1O15239 70 aa9.42□□□□□ -0.9
PPFIA1-216ENST00000530746 GEMIN7Q9H840 131 aaKnown RBP9.42□□□□□ -0.9
PPFIA1-216ENST00000530746 NUPR1O60356 82 aa9.41□□□□□ -0.9
PPFIA1-216ENST00000530746 GAGE2BQ13066 116 aa9.41□□□□□ -0.9
PPFIA1-216ENST00000530746 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
PPFIA1-216ENST00000530746 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.9
PPFIA1-216ENST00000530746 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
PPFIA1-216ENST00000530746 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
PPFIA1-216ENST00000530746 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
PPFIA1-216ENST00000530746 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
PPFIA1-216ENST00000530746 C7orf33Q8WU49 177 aa9.4□□□□□ -0.9
PPFIA1-216ENST00000530746 S100A6P06703 90 aa9.39□□□□□ -0.91
PPFIA1-216ENST00000530746 RPL18AQ02543 176 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-216ENST00000530746 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
PPFIA1-216ENST00000530746 HERC1Q15751 4861 aa9.39□□□□□ -0.91
PPFIA1-216ENST00000530746 MAP1LC3CQ9BXW4 147 aa9.38□□□□□ -0.91
PPFIA1-216ENST00000530746 C6orf48Q9UBA6 75 aa9.38□□□□□ -0.91
PPFIA1-216ENST00000530746 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
PPFIA1-216ENST00000530746 LRP1Q07954 4544 aaKnown RBP9.37□□□□□ -0.91
PPFIA1-216ENST00000530746 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
PPFIA1-216ENST00000530746 FABP4P15090 132 aa9.37□□□□□ -0.91
PPFIA1-216ENST00000530746 HNRNPA3P51991 378 aaKnown RBP9.37□□□□□ -0.91
PPFIA1-216ENST00000530746 FAT3Q8TDW7 4589 aa9.37□□□□□ -0.91
PPFIA1-216ENST00000530746 IGLV5-45A0A087WSX0 123 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 H3BRM9 83 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 PRSS2P07478 247 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 Q8IZM0 81 aa9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
PPFIA1-216ENST00000530746 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
PPFIA1-216ENST00000530746 F8VRH5 84 aa9.35□□□□□ -0.91
PPFIA1-216ENST00000530746 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
PPFIA1-216ENST00000530746 TOMM7Q9P0U1 55 aa9.35□□□□□ -0.91
PPFIA1-216ENST00000530746 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
PPFIA1-216ENST00000530746 S100A2P29034 98 aa9.34□□□□□ -0.91
PPFIA1-216ENST00000530746 CKS1BP61024 79 aa9.34□□□□□ -0.91
PPFIA1-216ENST00000530746 C9orf116Q5BN46 136 aaPredicted RBP9.34□□□□□ -0.91
PPFIA1-216ENST00000530746 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
PPFIA1-216ENST00000530746 Q6ZRP5 223 aa9.34□□□□□ -0.91
PPFIA1-216ENST00000530746 J3QL48 77 aa9.33□□□□□ -0.92
PPFIA1-216ENST00000530746 SMIM1B2RUZ4 78 aa9.32□□□□□ -0.92
PPFIA1-216ENST00000530746 PLNP26678 52 aa9.32□□□□□ -0.92
PPFIA1-216ENST00000530746 PRR3P79522 188 aaKnown RBP9.32□□□□□ -0.92
PPFIA1-216ENST00000530746 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 H0Y8G0 127 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 ODF1Q14990 250 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 GAGE2EQ4V326 116 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 PET117Q6UWS5 81 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 GAGE2DQ9UEU5 116 aa9.31□□□□□ -0.92
PPFIA1-216ENST00000530746 OXTP01178 125 aa9.3□□□□□ -0.92
PPFIA1-216ENST00000530746 AKR1D1P51857 326 aa9.3□□□□□ -0.92
PPFIA1-216ENST00000530746 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
PPFIA1-216ENST00000530746 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
PPFIA1-216ENST00000530746 DPM2O94777 84 aa9.29□□□□□ -0.92
PPFIA1-216ENST00000530746 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
PPFIA1-216ENST00000530746 CXCL5P42830 114 aa9.29□□□□□ -0.92
PPFIA1-216ENST00000530746 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
PPFIA1-216ENST00000530746 C20orf202A1L168 122 aa9.28□□□□□ -0.92
PPFIA1-216ENST00000530746 C5orf52A6NGY3 159 aa9.28□□□□□ -0.92
PPFIA1-216ENST00000530746 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
PPFIA1-216ENST00000530746 SNRPEP62304 92 aaKnown RBP9.28□□□□□ -0.92
PPFIA1-216ENST00000530746 COX7B2Q8TF08 81 aa9.28□□□□□ -0.92
PPFIA1-216ENST00000530746 IGKCP01834 107 aa9.27□□□□□ -0.93
PPFIA1-216ENST00000530746 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
PPFIA1-216ENST00000530746 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
PPFIA1-216ENST00000530746 HIST1H2BLQ99880 126 aa9.27□□□□□ -0.93
PPFIA1-216ENST00000530746 KRTDAPP60985 99 aa9.26□□□□□ -0.93
PPFIA1-216ENST00000530746 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
PPFIA1-216ENST00000530746 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
PPFIA1-216ENST00000530746 SFTA2Q6UW10 78 aa9.26□□□□□ -0.93
PPFIA1-216ENST00000530746 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
PPFIA1-216ENST00000530746 HERVK_113P61574 105 aa9.25□□□□□ -0.93
PPFIA1-216ENST00000530746 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
PPFIA1-216ENST00000530746 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
PPFIA1-216ENST00000530746 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
PPFIA1-216ENST00000530746 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
PPFIA1-216ENST00000530746 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
PPFIA1-216ENST00000530746 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
PPFIA1-216ENST00000530746 M0QXV9 152 aa9.21□□□□□ -0.94
PPFIA1-216ENST00000530746 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
PPFIA1-216ENST00000530746 PMCHL2Q9BQD1 86 aa9.21□□□□□ -0.94
PPFIA1-216ENST00000530746 C1orf137Q5JT78 98 aa9.2□□□□□ -0.94
PPFIA1-216ENST00000530746 PLEKHB2Q96CS7 222 aa9.2□□□□□ -0.94
PPFIA1-216ENST00000530746 SERTAD4-AS1Q5TG53 156 aa9.19□□□□□ -0.94
PPFIA1-216ENST00000530746 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
PPFIA1-216ENST00000530746 LEPROTO15243 131 aa9.18□□□□□ -0.94
PPFIA1-216ENST00000530746 TMA7Q9Y2S6 64 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms