RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 GVQW2A0A096LPI5 108 aaPredicted RBP3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 IGHV3OR16-9A0A0B4J2B5 98 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 A0A0J9YXV3 536 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 C19orf71A6NCJ1 209 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 GNG4P50150 75 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 SPINK6Q6UWN8 80 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 SLC7A5P1Q8MH63 180 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
AMBRA1-209ENST00000529963 TRAV1-1A0A0B4J248 108 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 H0Y9J4 135 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 PDE6DO43924 150 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 NCR2O95944 276 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 APCSP02743 223 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 NTF3P20783 257 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 CXCL5P42830 114 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 LYZL1Q6UWQ5 148 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 SMIM15Q7Z3B0 74 aa3.09□□□□□ -1.91
AMBRA1-209ENST00000529963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 A0A096LNI7 61 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 IGHV1-58A0A0C4DH39 117 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 IGKV2-29A2NJV5 120 aaPredicted RBP3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 BCL2P10415 239 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 FGF6P10767 208 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 ZNF25P17030 456 aaPredicted RBP3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 PEA15Q15121 130 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 GATD1Q8NB37 220 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 OR5A1Q8NGJ0 315 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 BTF3L4Q96K17 158 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 CARD19Q96LW7 228 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 FAM210AQ96ND0 272 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 CNFNQ9BYD5 112 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 MED9Q9NWA0 146 aa3.09□□□□□ -1.92
AMBRA1-209ENST00000529963 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 TRAV26-2A0A0B4J265 109 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 LINC00862A6NCI5 91 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 K7EN84 100 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 CCL25O15444 150 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 XCL1P47992 114 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 UBE2AP49459 152 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 MEF2BQ02080 365 aaPredicted RBP3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 NDUFA5Q16718 116 aa3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 RPP21Q9H633 154 aaKnown RBP3.08□□□□□ -1.92
AMBRA1-209ENST00000529963 TRBV20OR9-2A0A075B6H5 130 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 LINC00959A0A1B0GUT2 108 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 SDHAF1A6NFY7 115 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 C9JQL5 133 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 F8W036 122 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 I3L3M4 83 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 ZNF861PO60384 105 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 SYCNQ0VAF6 134 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 SS18Q15532 418 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 ORMDL2Q53FV1 153 aa3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 RPL39LQ96EH5 51 aaKnown RBP3.07□□□□□ -1.92
AMBRA1-209ENST00000529963 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
AMBRA1-209ENST00000529963 SRP19P09132 144 aaKnown RBP3.06□□□□□ -1.92
AMBRA1-209ENST00000529963 LINC00526Q96FQ7 95 aa3.06□□□□□ -1.92
AMBRA1-209ENST00000529963 MRAP2Q96G30 205 aa3.06□□□□□ -1.92
AMBRA1-209ENST00000529963 SMIM7Q9BQ49 75 aa3.06□□□□□ -1.92
AMBRA1-209ENST00000529963 RNASE7Q9H1E1 156 aaKnown RBP3.06□□□□□ -1.92
AMBRA1-209ENST00000529963 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 TMEM218A2RU14 115 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 ZNF727A8MUV8 499 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 A8MWL6 223 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 TMEM250H0YL14 139 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 APOC3P02656 99 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 MT-ND6P03923 174 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 SMAGPQ0VAQ4 97 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 BORCS7Q96B45 105 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 ST20Q9HBF5 79 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 TMEM242Q9NWH2 141 aa3.05□□□□□ -1.92
AMBRA1-209ENST00000529963 IGLV4-69A0A075B6H9 119 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 C7orf77A4D0Y5 90 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 C1orf196B1AJZ1 125 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 COX7A2LO14548 114 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 APOMO95445 188 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 ESDP10768 282 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 FOXA3P55318 350 aaPredicted RBP3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 ADIRFQ15847 76 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 MRPL52Q86TS9 123 aaKnown RBP3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 ZNF664Q8N3J9 261 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 CAMK2N2Q96S95 79 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 TIMM17AQ99595 171 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 SMDT1Q9H4I9 107 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 CDC42SE2Q9NRR3 84 aa3.04□□□□□ -1.92
AMBRA1-209ENST00000529963 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 ADCYAP1P18509 176 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 FCER1GP30273 86 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 TMEM241Q24JQ0 296 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 FAM231DQ6ZW35 169 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 PCP2Q8IVA1 136 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 NUP35Q8NFH5 326 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 TSKUQ8WUA8 353 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 PSORS1C2Q9UIG4 136 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 LPAP08519 4548 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 SMIM26A0A096LP01 95 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 TRAV13-1A0A0B4J241 112 aa3.03□□□□□ -1.92
AMBRA1-209ENST00000529963 A0A1B0GUT8 65 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms