RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 IGLV5-45A0A087WSX0 123 aa8□□□□□ -1.13
CCDC90B-216ENST00000529856 ATP5LO75964 103 aa8□□□□□ -1.13
CCDC90B-216ENST00000529856 C2orf82Q6UX34 121 aa8□□□□□ -1.13
CCDC90B-216ENST00000529856 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
CCDC90B-216ENST00000529856 C6orf48Q9UBA6 75 aa8□□□□□ -1.13
CCDC90B-216ENST00000529856 PRSS2P07478 247 aa7.99□□□□□ -1.13
CCDC90B-216ENST00000529856 BAGE3Q86Y29 109 aa7.99□□□□□ -1.13
CCDC90B-216ENST00000529856 Q8IZM0 81 aa7.99□□□□□ -1.13
CCDC90B-216ENST00000529856 PACRGQ96M98 296 aaPredicted RBP7.99□□□□□ -1.13
CCDC90B-216ENST00000529856 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 TLX1NBP0CAT3 122 aa7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 IGLC3P0DOY3 106 aa7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 NDUFA6P56556 154 aa7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 C6orf226Q5I0X4 101 aa7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 TOMM7Q9P0U1 55 aa7.98□□□□□ -1.13
CCDC90B-216ENST00000529856 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
CCDC90B-216ENST00000529856 SCO1O75880 301 aa7.97□□□□□ -1.13
CCDC90B-216ENST00000529856 CKS1BP61024 79 aa7.97□□□□□ -1.13
CCDC90B-216ENST00000529856 RPL18AQ02543 176 aaKnown RBP7.97□□□□□ -1.13
CCDC90B-216ENST00000529856 HSBP1O75506 76 aa7.96□□□□□ -1.14
CCDC90B-216ENST00000529856 Q6ZRP5 223 aa7.96□□□□□ -1.14
CCDC90B-216ENST00000529856 A0A1W2PNN7 141 aa7.95□□□□□ -1.14
CCDC90B-216ENST00000529856 H3BRM9 83 aa7.95□□□□□ -1.14
CCDC90B-216ENST00000529856 LINC00310P59036 64 aa7.95□□□□□ -1.14
CCDC90B-216ENST00000529856 FAM19A2Q8N3H0 131 aa7.95□□□□□ -1.14
CCDC90B-216ENST00000529856 C7orf33Q8WU49 177 aa7.95□□□□□ -1.14
CCDC90B-216ENST00000529856 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
CCDC90B-216ENST00000529856 NDUFC2-KCTD14E9PQ53 114 aa7.94□□□□□ -1.14
CCDC90B-216ENST00000529856 SERF1AO75920 110 aa7.94□□□□□ -1.14
CCDC90B-216ENST00000529856 SPINK8P0C7L1 97 aa7.94□□□□□ -1.14
CCDC90B-216ENST00000529856 CXCL5P42830 114 aa7.94□□□□□ -1.14
CCDC90B-216ENST00000529856 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
CCDC90B-216ENST00000529856 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
CCDC90B-216ENST00000529856 TRAV12-1A0A0B4J245 112 aa7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 F8VRH5 84 aa7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 GAGE2EQ4V326 116 aa7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 GAGE2DQ9UEU5 116 aa7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 CHTOPQ9Y3Y2 248 aaKnown RBP7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
CCDC90B-216ENST00000529856 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
CCDC90B-216ENST00000529856 NUPR1O60356 82 aa7.92□□□□□ -1.14
CCDC90B-216ENST00000529856 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
CCDC90B-216ENST00000529856 MYCBP2O75592 4640 aa7.9□□□□□ -1.14
CCDC90B-216ENST00000529856 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
CCDC90B-216ENST00000529856 LEPROTL1O95214 131 aa7.9□□□□□ -1.14
CCDC90B-216ENST00000529856 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
CCDC90B-216ENST00000529856 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
CCDC90B-216ENST00000529856 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
CCDC90B-216ENST00000529856 TMEM170BQ5T4T1 132 aa7.89□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BKO60814 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BJP06899 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BOP23527 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BBP33778 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BDP58876 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BCP62807 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST2H2BEQ16778 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BHQ93079 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BNQ99877 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 HIST1H2BMQ99879 126 aa7.88□□□□□ -1.15
CCDC90B-216ENST00000529856 FABP4P15090 132 aa7.87□□□□□ -1.15
CCDC90B-216ENST00000529856 HSPB8Q9UJY1 196 aa7.87□□□□□ -1.15
CCDC90B-216ENST00000529856 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
CCDC90B-216ENST00000529856 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
CCDC90B-216ENST00000529856 ODF1Q14990 250 aa7.86□□□□□ -1.15
CCDC90B-216ENST00000529856 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
CCDC90B-216ENST00000529856 H0Y8G0 127 aa7.85□□□□□ -1.15
CCDC90B-216ENST00000529856 XAGE1AQ9HD64 81 aa7.85□□□□□ -1.15
CCDC90B-216ENST00000529856 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
CCDC90B-216ENST00000529856 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-216ENST00000529856 S100A1P23297 94 aa7.84□□□□□ -1.15
CCDC90B-216ENST00000529856 M0QXV9 152 aa7.83□□□□□ -1.16
CCDC90B-216ENST00000529856 OXTP01178 125 aa7.83□□□□□ -1.16
CCDC90B-216ENST00000529856 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
CCDC90B-216ENST00000529856 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
CCDC90B-216ENST00000529856 PFN2P35080 140 aa7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 XP32Q5T750 250 aa7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 SERTAD4-AS1Q5TG53 156 aa7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 KRTAP11-1Q8IUC1 163 aa7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 ZNF625Q96I27 306 aaPredicted RBP7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 MAP1LC3CQ9BXW4 147 aa7.82□□□□□ -1.16
CCDC90B-216ENST00000529856 PLNP26678 52 aa7.81□□□□□ -1.16
CCDC90B-216ENST00000529856 COX17Q14061 63 aa7.81□□□□□ -1.16
CCDC90B-216ENST00000529856 COA6Q5JTJ3 125 aaKnown RBP7.81□□□□□ -1.16
CCDC90B-216ENST00000529856 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
CCDC90B-216ENST00000529856 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
CCDC90B-216ENST00000529856 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
CCDC90B-216ENST00000529856 ATP6V1G1O75348 118 aa7.8□□□□□ -1.16
CCDC90B-216ENST00000529856 DPM2O94777 84 aa7.8□□□□□ -1.16
CCDC90B-216ENST00000529856 C1orf137Q5JT78 98 aa7.8□□□□□ -1.16
CCDC90B-216ENST00000529856 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
CCDC90B-216ENST00000529856 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
CCDC90B-216ENST00000529856 DMBT1Q9UGM3 2413 aaPredicted RBP7.79□□□□□ -1.16
CCDC90B-216ENST00000529856 UBE2BP63146 152 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 1418.1 ms