RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 F8VRH5 84 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 SRP19P09132 144 aaKnown RBP6.77□□□□□ -1.33
CMTM1-211ENST00000528484 UBE2AP49459 152 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
CMTM1-211ENST00000528484 SEC11AP67812 179 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 TPRXLQ17RH7 258 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 RETNLBQ9BQ08 111 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 NAT8Q9UHE5 227 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 CYSLTR1Q9Y271 337 aa6.77□□□□□ -1.33
CMTM1-211ENST00000528484 IGKV2D-26A0A0A0MRZ7 120 aa6.76□□□□□ -1.33
CMTM1-211ENST00000528484 CXCL5P42830 114 aa6.76□□□□□ -1.33
CMTM1-211ENST00000528484 TMEM136Q6ZRR5 245 aa6.76□□□□□ -1.33
CMTM1-211ENST00000528484 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
CMTM1-211ENST00000528484 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
CMTM1-211ENST00000528484 HERVK_113P63121 156 aa6.75□□□□□ -1.33
CMTM1-211ENST00000528484 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
CMTM1-211ENST00000528484 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
CMTM1-211ENST00000528484 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
CMTM1-211ENST00000528484 MAP1LC3AQ9H492 121 aa6.75□□□□□ -1.33
CMTM1-211ENST00000528484 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
CMTM1-211ENST00000528484 LOC389332A0A1B0GUA5 103 aa6.74□□□□□ -1.33
CMTM1-211ENST00000528484 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
CMTM1-211ENST00000528484 NPSP0C0P6 89 aa6.74□□□□□ -1.33
CMTM1-211ENST00000528484 CTAG1AP78358 180 aa6.74□□□□□ -1.33
CMTM1-211ENST00000528484 LAMTOR2Q9Y2Q5 125 aa6.74□□□□□ -1.33
CMTM1-211ENST00000528484 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
CMTM1-211ENST00000528484 ORMDL2Q53FV1 153 aa6.73□□□□□ -1.33
CMTM1-211ENST00000528484 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
CMTM1-211ENST00000528484 ATP5L2Q7Z4Y8 100 aa6.73□□□□□ -1.33
CMTM1-211ENST00000528484 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
CMTM1-211ENST00000528484 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
CMTM1-211ENST00000528484 A0A1B0GXF2 115 aa6.72□□□□□ -1.33
CMTM1-211ENST00000528484 LCE2BO14633 110 aa6.72□□□□□ -1.33
CMTM1-211ENST00000528484 G0S2P27469 103 aa6.72□□□□□ -1.33
CMTM1-211ENST00000528484 AKAP14Q86UN6 197 aa6.72□□□□□ -1.33
CMTM1-211ENST00000528484 AMELXQ99217 191 aa6.72□□□□□ -1.33
CMTM1-211ENST00000528484 K7EMI3 77 aa6.71□□□□□ -1.34
CMTM1-211ENST00000528484 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
CMTM1-211ENST00000528484 ZC2HC1BQ5TFG8 222 aa6.71□□□□□ -1.34
CMTM1-211ENST00000528484 PEA15Q15121 130 aa6.7□□□□□ -1.34
CMTM1-211ENST00000528484 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
CMTM1-211ENST00000528484 Q8N8P6 123 aa6.7□□□□□ -1.34
CMTM1-211ENST00000528484 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
CMTM1-211ENST00000528484 CDKN2A-AS1Q9UH64 79 aa6.7□□□□□ -1.34
CMTM1-211ENST00000528484 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
CMTM1-211ENST00000528484 LINC01547P58512 204 aaPredicted RBP6.69□□□□□ -1.34
CMTM1-211ENST00000528484 PNRC1Q12796 327 aaPredicted RBP6.69□□□□□ -1.34
CMTM1-211ENST00000528484 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
CMTM1-211ENST00000528484 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CMTM1-211ENST00000528484 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CMTM1-211ENST00000528484 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
CMTM1-211ENST00000528484 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 RAB5BP61020 215 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 PDZD11Q5EBL8 140 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 KRTAP13-1Q8IUC0 172 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
CMTM1-211ENST00000528484 NXT2Q9NPJ8 142 aaKnown RBP6.67□□□□□ -1.34
CMTM1-211ENST00000528484 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
CMTM1-211ENST00000528484 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
CMTM1-211ENST00000528484 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
CMTM1-211ENST00000528484 ATP5LO75964 103 aa6.65□□□□□ -1.34
CMTM1-211ENST00000528484 PRLHP81277 87 aa6.65□□□□□ -1.34
CMTM1-211ENST00000528484 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
CMTM1-211ENST00000528484 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
CMTM1-211ENST00000528484 SMIM1B2RUZ4 78 aa6.64□□□□□ -1.35
CMTM1-211ENST00000528484 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
CMTM1-211ENST00000528484 C9JQL5 133 aa6.63□□□□□ -1.35
CMTM1-211ENST00000528484 H3BRM9 83 aa6.63□□□□□ -1.35
CMTM1-211ENST00000528484 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
CMTM1-211ENST00000528484 CBLN2Q8IUK8 224 aa6.63□□□□□ -1.35
CMTM1-211ENST00000528484 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
CMTM1-211ENST00000528484 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
CMTM1-211ENST00000528484 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
CMTM1-211ENST00000528484 ERASQ7Z444 233 aa6.62□□□□□ -1.35
CMTM1-211ENST00000528484 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
CMTM1-211ENST00000528484 PFN2P35080 140 aa6.61□□□□□ -1.35
CMTM1-211ENST00000528484 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
CMTM1-211ENST00000528484 MRPL18Q9H0U6 180 aaKnown RBP6.61□□□□□ -1.35
CMTM1-211ENST00000528484 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
CMTM1-211ENST00000528484 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
CMTM1-211ENST00000528484 SCO1O75880 301 aa6.6□□□□□ -1.35
CMTM1-211ENST00000528484 SPINK8P0C7L1 97 aa6.6□□□□□ -1.35
CMTM1-211ENST00000528484 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
CMTM1-211ENST00000528484 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
CMTM1-211ENST00000528484 PLEKHB2Q96CS7 222 aa6.6□□□□□ -1.35
CMTM1-211ENST00000528484 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
CMTM1-211ENST00000528484 IGLV5-45A0A087WSX0 123 aa6.59□□□□□ -1.35
CMTM1-211ENST00000528484 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
CMTM1-211ENST00000528484 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
CMTM1-211ENST00000528484 MT-ND4LP03901 98 aa6.59□□□□□ -1.35
CMTM1-211ENST00000528484 C21orf62-AS1Q17RA5 79 aa6.59□□□□□ -1.35
CMTM1-211ENST00000528484 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
CMTM1-211ENST00000528484 M0R378 163 aa6.57□□□□□ -1.36
CMTM1-211ENST00000528484 VPREB1P12018 145 aa6.57□□□□□ -1.36
CMTM1-211ENST00000528484 RAB14P61106 215 aa6.57□□□□□ -1.36
CMTM1-211ENST00000528484 COX17Q14061 63 aa6.57□□□□□ -1.36
CMTM1-211ENST00000528484 PMVKQ15126 192 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms