RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 MAP1LC3AQ9H492 121 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 PYGO1Q9Y3Y4 419 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 SYS1-DBNDD2H3BUS1 97 aa6.09□□□□□ -1.43
CHD7-208ENST00000528280 IGLC3P0DOY3 106 aa6.09□□□□□ -1.43
CHD7-208ENST00000528280 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
CHD7-208ENST00000528280 Q6ZRU5 148 aa6.09□□□□□ -1.43
CHD7-208ENST00000528280 STPG4Q8N801 248 aa6.09□□□□□ -1.43
CHD7-208ENST00000528280 PAM16Q9Y3D7 125 aa6.09□□□□□ -1.43
CHD7-208ENST00000528280 IGKV2-24A0A0C4DH68 120 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 A0A1B0GV90 55 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 LINC01546A6NGU7 62 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 NPSP0C0P6 89 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 CHTF8P0CG12 524 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 RPL39P62891 51 aaKnown RBP6.08□□□□□ -1.44
CHD7-208ENST00000528280 ORMDL2Q53FV1 153 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 Q6ZUT4 128 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 Q8N8P6 123 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 CAMK2N2Q96S95 79 aa6.08□□□□□ -1.44
CHD7-208ENST00000528280 LOC389332A0A1B0GUA5 103 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 HSBP1L1C9JCN9 74 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
CHD7-208ENST00000528280 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 Q6ZN92 141 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 TMEM141Q96I45 108 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 SNHG12Q9BXW3 62 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 NXT2Q9NPJ8 142 aaKnown RBP6.07□□□□□ -1.44
CHD7-208ENST00000528280 CYSLTR1Q9Y271 337 aa6.07□□□□□ -1.44
CHD7-208ENST00000528280 A0A096LNI7 61 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 LINC01549A6NIU2 74 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 HBDP02042 147 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 HNRNPA3P51991 378 aaKnown RBP6.06□□□□□ -1.44
CHD7-208ENST00000528280 LINC01545Q5VT33 79 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 LINC00526Q96FQ7 95 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 PMCHL2Q9BQD1 86 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 VCX2Q9H322 139 aa6.06□□□□□ -1.44
CHD7-208ENST00000528280 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
CHD7-208ENST00000528280 SEC11AP67812 179 aa6.05□□□□□ -1.44
CHD7-208ENST00000528280 SPAG11BQ08648 103 aa6.05□□□□□ -1.44
CHD7-208ENST00000528280 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
CHD7-208ENST00000528280 LINC01561Q8N1V8 128 aa6.05□□□□□ -1.44
CHD7-208ENST00000528280 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
CHD7-208ENST00000528280 CBY1Q9Y3M2 126 aa6.05□□□□□ -1.44
CHD7-208ENST00000528280 A0A087WZ39 114 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 NDUFA1O15239 70 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 DLEU1O43261 78 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 C2orf66Q6UXQ4 117 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 ORAOV1Q8WV07 137 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 FAM104AQ969W3 186 aa6.04□□□□□ -1.44
CHD7-208ENST00000528280 OPRPNQ99935 248 aaPredicted RBP6.04□□□□□ -1.44
CHD7-208ENST00000528280 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
CHD7-208ENST00000528280 IGLV4-3A0A075B6K6 122 aa6.03□□□□□ -1.44
CHD7-208ENST00000528280 Q6ZRP5 223 aa6.03□□□□□ -1.44
CHD7-208ENST00000528280 LINC00242Q5T6M2 205 aa6.02□□□□□ -1.45
CHD7-208ENST00000528280 SLC25A34Q6PIV7 304 aa6.02□□□□□ -1.45
CHD7-208ENST00000528280 AMELXQ99217 191 aa6.02□□□□□ -1.45
CHD7-208ENST00000528280 A0A096LNJ9 63 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 IGIPA6NJ69 53 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.01□□□□□ -1.45
CHD7-208ENST00000528280 ATP5LO75964 103 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 UBE2D1P51668 147 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 SPINK6Q6UWN8 80 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
CHD7-208ENST00000528280 TRBV30A0A0K0K1B3 111 aa6□□□□□ -1.45
CHD7-208ENST00000528280 PRSS2P07478 247 aa6□□□□□ -1.45
CHD7-208ENST00000528280 HERVK_113P63121 156 aa6□□□□□ -1.45
CHD7-208ENST00000528280 PRR3P79522 188 aaKnown RBP6□□□□□ -1.45
CHD7-208ENST00000528280 RPL18AQ02543 176 aaKnown RBP6□□□□□ -1.45
CHD7-208ENST00000528280 LINC00173Q6ZV60 143 aa6□□□□□ -1.45
CHD7-208ENST00000528280 ERASQ7Z444 233 aa6□□□□□ -1.45
CHD7-208ENST00000528280 FAM19A3Q7Z5A8 133 aa6□□□□□ -1.45
CHD7-208ENST00000528280 TOMM6Q96B49 74 aa6□□□□□ -1.45
CHD7-208ENST00000528280 IFI27L1Q96BM0 104 aa6□□□□□ -1.45
CHD7-208ENST00000528280 COX8AP10176 69 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 CKS1BP61024 79 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
CHD7-208ENST00000528280 C6orf226Q5I0X4 101 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 REG3GQ6UW15 175 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 ATOH7Q8N100 152 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 SCGB3A1Q96QR1 104 aa5.99□□□□□ -1.45
CHD7-208ENST00000528280 GEMIN7Q9H840 131 aaKnown RBP5.99□□□□□ -1.45
CHD7-208ENST00000528280 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
CHD7-208ENST00000528280 KIAA0087Q14695 138 aa5.98□□□□□ -1.45
CHD7-208ENST00000528280 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
CHD7-208ENST00000528280 LRP2P98164 4655 aa5.98□□□□□ -1.45
CHD7-208ENST00000528280 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
CHD7-208ENST00000528280 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
CHD7-208ENST00000528280 A0A0J9YXV3 536 aa5.97□□□□□ -1.45
CHD7-208ENST00000528280 NDUFC2-KCTD14E9PQ53 114 aa5.97□□□□□ -1.45
CHD7-208ENST00000528280 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD7-208ENST00000528280 Q8IZM0 81 aa5.97□□□□□ -1.45
CHD7-208ENST00000528280 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
CHD7-208ENST00000528280 TRAV12-1A0A0B4J245 112 aa5.96□□□□□ -1.46
CHD7-208ENST00000528280 ANKRD39Q53RE8 183 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms