RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 TRBV7-3A0A075B6L6 115 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 F5H697 171 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 PPP1R17O96001 155 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 RPL24P83731 157 aaKnown RBP6.37□□□□□ -1.39
CAPN1-210ENST00000527699 ORMDL2Q53FV1 153 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 ZC2HC1BQ5TFG8 222 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 PCP2Q8IVA1 136 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 DPH3Q96FX2 82 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 RNF185Q96GF1 192 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
CAPN1-210ENST00000527699 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 TRBV6-8A0A0A6YYG3 113 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 E9PLD3 99 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.36□□□□□ -1.39
CAPN1-210ENST00000527699 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 C14orf177Q52M58 125 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 PIK3CD-AS1Q5SR53 167 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 LINC00269Q8N2A0 174 aa6.36□□□□□ -1.39
CAPN1-210ENST00000527699 NHP2Q9NX24 153 aaKnown RBP6.36□□□□□ -1.39
CAPN1-210ENST00000527699 F8VRH5 84 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 SMKR1H3BMG3 65 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 H7C1H1 209 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 FXYD2P54710 66 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 PAPPA-AS1Q5QFB9 102 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 NTM-AS1Q6ZSK4 140 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 HIST1H4GQ99525 98 aa6.35□□□□□ -1.39
CAPN1-210ENST00000527699 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 MGPP08493 103 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 HERVK_113P61574 105 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 SPANXN1Q5VSR9 72 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 C20orf78Q9BR46 151 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 CHCHD7Q9BUK0 85 aa6.34□□□□□ -1.39
CAPN1-210ENST00000527699 MYMXA0A1B0GTQ4 84 aa6.33□□□□□ -1.4
CAPN1-210ENST00000527699 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
CAPN1-210ENST00000527699 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
CAPN1-210ENST00000527699 C9orf163Q8N9P6 203 aa6.33□□□□□ -1.4
CAPN1-210ENST00000527699 SMIM2Q9BVW6 85 aa6.33□□□□□ -1.4
CAPN1-210ENST00000527699 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
CAPN1-210ENST00000527699 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
CAPN1-210ENST00000527699 SDIM1Q6ZPB5 146 aa6.32□□□□□ -1.4
CAPN1-210ENST00000527699 NAA38Q9BRA0 125 aaKnown RBP6.32□□□□□ -1.4
CAPN1-210ENST00000527699 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
CAPN1-210ENST00000527699 MRPL35Q9NZE8 188 aaKnown RBP6.32□□□□□ -1.4
CAPN1-210ENST00000527699 IGKV3OR2-268A0A0C4DH90 116 aa6.31□□□□□ -1.4
CAPN1-210ENST00000527699 MIAQ16674 131 aa6.31□□□□□ -1.4
CAPN1-210ENST00000527699 NRACQ8N912 160 aa6.31□□□□□ -1.4
CAPN1-210ENST00000527699 TOMM6Q96B49 74 aa6.31□□□□□ -1.4
CAPN1-210ENST00000527699 SCGB3A1Q96QR1 104 aa6.31□□□□□ -1.4
CAPN1-210ENST00000527699 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
CAPN1-210ENST00000527699 IGLV4-60A0A075B6I1 120 aa6.3□□□□□ -1.4
CAPN1-210ENST00000527699 TRBV20-1A0A075B6N2 111 aa6.3□□□□□ -1.4
CAPN1-210ENST00000527699 H3BMG7 143 aa6.3□□□□□ -1.4
CAPN1-210ENST00000527699 K7ERJ3 54 aa6.3□□□□□ -1.4
CAPN1-210ENST00000527699 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
CAPN1-210ENST00000527699 A0A087WYN8 130 aa6.29□□□□□ -1.4
CAPN1-210ENST00000527699 APOMO95445 188 aa6.29□□□□□ -1.4
CAPN1-210ENST00000527699 SLPIP03973 132 aa6.29□□□□□ -1.4
CAPN1-210ENST00000527699 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
CAPN1-210ENST00000527699 RPL32P62910 135 aaKnown RBP6.29□□□□□ -1.4
CAPN1-210ENST00000527699 REG3AQ06141 175 aa6.29□□□□□ -1.4
CAPN1-210ENST00000527699 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
CAPN1-210ENST00000527699 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
CAPN1-210ENST00000527699 IGHV3-64A0A075B6Q5 118 aa6.28□□□□□ -1.4
CAPN1-210ENST00000527699 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
CAPN1-210ENST00000527699 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
CAPN1-210ENST00000527699 SCGB1D4Q6XE38 83 aa6.28□□□□□ -1.4
CAPN1-210ENST00000527699 C20orf203Q8NBC4 194 aa6.28□□□□□ -1.4
CAPN1-210ENST00000527699 KIF25-AS1Q9Y6Z4 181 aa6.28□□□□□ -1.4
CAPN1-210ENST00000527699 IGKV2-24A0A0C4DH68 120 aa6.27□□□□□ -1.41
CAPN1-210ENST00000527699 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
CAPN1-210ENST00000527699 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.41
CAPN1-210ENST00000527699 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
CAPN1-210ENST00000527699 Q6ZRU5 148 aa6.27□□□□□ -1.41
CAPN1-210ENST00000527699 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
CAPN1-210ENST00000527699 M0QXV9 152 aa6.26□□□□□ -1.41
CAPN1-210ENST00000527699 FOXI1Q12951 378 aa6.26□□□□□ -1.41
CAPN1-210ENST00000527699 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
CAPN1-210ENST00000527699 ETDBQ3ZM63 59 aa6.26□□□□□ -1.41
CAPN1-210ENST00000527699 C2orf66Q6UXQ4 117 aa6.26□□□□□ -1.41
CAPN1-210ENST00000527699 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
CAPN1-210ENST00000527699 TMEM243Q9BU79 118 aa6.26□□□□□ -1.41
CAPN1-210ENST00000527699 M0QY20 66 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 UBE2D1P51668 147 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 CKS1BP61024 79 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 COX6A2Q02221 97 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 SPACA4Q8TDM5 124 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 PRO0461Q9UI25 63 aa6.25□□□□□ -1.41
CAPN1-210ENST00000527699 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.24□□□□□ -1.41
CAPN1-210ENST00000527699 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
CAPN1-210ENST00000527699 UBE2L6O14933 153 aa6.24□□□□□ -1.41
CAPN1-210ENST00000527699 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
CAPN1-210ENST00000527699 PMVKQ15126 192 aa6.24□□□□□ -1.41
CAPN1-210ENST00000527699 TIMM17AQ99595 171 aa6.24□□□□□ -1.41
CAPN1-210ENST00000527699 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
CAPN1-210ENST00000527699 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
CAPN1-210ENST00000527699 CIRBPQ14011 172 aaKnown RBP6.23□□□□□ -1.41
CAPN1-210ENST00000527699 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
CAPN1-210ENST00000527699 C15orf56Q8N910 161 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms