RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 HNRNPA3P51991 378 aaKnown RBP10.55□□□□□ -0.72
NR1H3-229ENST00000527464 CKS1BP61024 79 aa10.55□□□□□ -0.72
NR1H3-229ENST00000527464 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
NR1H3-229ENST00000527464 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
NR1H3-229ENST00000527464 LINC00469Q8N7U9 141 aa10.55□□□□□ -0.72
NR1H3-229ENST00000527464 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
NR1H3-229ENST00000527464 A0A1W2PNN7 141 aa10.54□□□□□ -0.72
NR1H3-229ENST00000527464 PRR3P79522 188 aaKnown RBP10.54□□□□□ -0.72
NR1H3-229ENST00000527464 Q6ZRP5 223 aa10.54□□□□□ -0.72
NR1H3-229ENST00000527464 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
NR1H3-229ENST00000527464 CXCL5P42830 114 aa10.53□□□□□ -0.72
NR1H3-229ENST00000527464 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
NR1H3-229ENST00000527464 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.73
NR1H3-229ENST00000527464 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
NR1H3-229ENST00000527464 ATP5LO75964 103 aa10.52□□□□□ -0.73
NR1H3-229ENST00000527464 CBLN2Q8IUK8 224 aa10.52□□□□□ -0.73
NR1H3-229ENST00000527464 SLC7A5P1Q8MH63 180 aa10.52□□□□□ -0.73
NR1H3-229ENST00000527464 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
NR1H3-229ENST00000527464 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
NR1H3-229ENST00000527464 F8VRH5 84 aa10.5□□□□□ -0.73
NR1H3-229ENST00000527464 H3BRM9 83 aa10.5□□□□□ -0.73
NR1H3-229ENST00000527464 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
NR1H3-229ENST00000527464 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
NR1H3-229ENST00000527464 IGLC3P0DOY3 106 aa10.49□□□□□ -0.73
NR1H3-229ENST00000527464 PMCHL1Q16048 86 aa10.49□□□□□ -0.73
NR1H3-229ENST00000527464 NDUFA6P56556 154 aa10.48□□□□□ -0.73
NR1H3-229ENST00000527464 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
NR1H3-229ENST00000527464 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
NR1H3-229ENST00000527464 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
NR1H3-229ENST00000527464 BAGE3Q86Y29 109 aa10.45□□□□□ -0.74
NR1H3-229ENST00000527464 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
NR1H3-229ENST00000527464 FAM168BA1KXE4 195 aa10.44□□□□□ -0.74
NR1H3-229ENST00000527464 TRGC2P03986 189 aa10.44□□□□□ -0.74
NR1H3-229ENST00000527464 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
NR1H3-229ENST00000527464 C9orf129Q5T035 196 aaKnown RBP10.44□□□□□ -0.74
NR1H3-229ENST00000527464 SPINK6Q6UWN8 80 aa10.44□□□□□ -0.74
NR1H3-229ENST00000527464 ODF1Q14990 250 aa10.43□□□□□ -0.74
NR1H3-229ENST00000527464 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
NR1H3-229ENST00000527464 PSORS1C2Q9UIG4 136 aa10.43□□□□□ -0.74
NR1H3-229ENST00000527464 HSBP1O75506 76 aa10.42□□□□□ -0.74
NR1H3-229ENST00000527464 SRSF9Q13242 221 aaKnown RBP eCLIP10.42□□□□□ -0.74
NR1H3-229ENST00000527464 IFI27L1Q96BM0 104 aa10.42□□□□□ -0.74
NR1H3-229ENST00000527464 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
NR1H3-229ENST00000527464 M0QXV9 152 aa10.41□□□□□ -0.74
NR1H3-229ENST00000527464 KRTAP7-1Q8IUC3 87 aa10.41□□□□□ -0.74
NR1H3-229ENST00000527464 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
NR1H3-229ENST00000527464 COLCA2A8K830 154 aa10.4□□□□□ -0.74
NR1H3-229ENST00000527464 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
NR1H3-229ENST00000527464 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
NR1H3-229ENST00000527464 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
NR1H3-229ENST00000527464 TMEM170BQ5T4T1 132 aa10.38□□□□□ -0.75
NR1H3-229ENST00000527464 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
NR1H3-229ENST00000527464 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
NR1H3-229ENST00000527464 UBE2BP63146 152 aa10.37□□□□□ -0.75
NR1H3-229ENST00000527464 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
NR1H3-229ENST00000527464 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
NR1H3-229ENST00000527464 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
NR1H3-229ENST00000527464 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
NR1H3-229ENST00000527464 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
NR1H3-229ENST00000527464 SERF1AO75920 110 aa10.35□□□□□ -0.75
NR1H3-229ENST00000527464 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
NR1H3-229ENST00000527464 PLA2G2DQ9UNK4 145 aa10.35□□□□□ -0.75
NR1H3-229ENST00000527464 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
NR1H3-229ENST00000527464 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
NR1H3-229ENST00000527464 COX17Q14061 63 aa10.34□□□□□ -0.75
NR1H3-229ENST00000527464 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
NR1H3-229ENST00000527464 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
NR1H3-229ENST00000527464 LINC00310P59036 64 aa10.33□□□□□ -0.76
NR1H3-229ENST00000527464 TMEM223A0PJW6 202 aa10.32□□□□□ -0.76
NR1H3-229ENST00000527464 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
NR1H3-229ENST00000527464 DIRC1Q969H9 104 aa10.31□□□□□ -0.76
NR1H3-229ENST00000527464 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
NR1H3-229ENST00000527464 HSPB8Q9UJY1 196 aa10.31□□□□□ -0.76
NR1H3-229ENST00000527464 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
NR1H3-229ENST00000527464 IGLV5-37A0A075B6J1 123 aa10.3□□□□□ -0.76
NR1H3-229ENST00000527464 NUPR1O60356 82 aa10.3□□□□□ -0.76
NR1H3-229ENST00000527464 PFN2P35080 140 aa10.3□□□□□ -0.76
NR1H3-229ENST00000527464 TNXBP22105 4242 aa10.29□□□□□ -0.76
NR1H3-229ENST00000527464 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
NR1H3-229ENST00000527464 H0Y8G0 127 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 H0Y9J4 135 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 SCO1O75880 301 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 FABP4P15090 132 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 PLNP26678 52 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
NR1H3-229ENST00000527464 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BKO60814 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 ATP6V1G1O75348 118 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BJP06899 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BOP23527 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HERV-K104P63124 156 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 RPL24P83731 157 aaKnown RBP10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
NR1H3-229ENST00000527464 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms