RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 RPRMQ9NS64 109 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 LSM2Q9Y333 95 aaKnown RBP1.64□□□□□ -2.15
CD44-223ENST00000526553 EPPK1P58107 5090 aaKnown RBP1.63□□□□□ -2.15
CD44-223ENST00000526553 RYR2Q92736 4967 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 IGLC7A0M8Q6 106 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 ODAMA1E959 279 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 H3BMG7 143 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 K7EP34 96 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 M0R378 163 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 PIN1P1O15428 100 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 YPEL1O60688 119 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 HYPMO75409 117 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 CST7O76096 145 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 LEPROTL1O95214 131 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 NCR2O95944 276 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 PPP1R17O96001 155 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 TRACP01848 142 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 SCTP09683 121 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 SLC25A6P12236 298 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 FXYD6P3P58550 94 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 MRPS36P82909 103 aaKnown RBP1.63□□□□□ -2.15
CD44-223ENST00000526553 KLRD1Q13241 179 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 CDK5R1Q15078 307 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 ESRGQ1W209 222 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 S100A7L2Q5SY68 101 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 LINC01545Q5VT33 79 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 C6orf201Q7Z4U5 140 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 PLEKHB2Q96CS7 222 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 OR4C12Q96R67 309 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 GPX7Q96SL4 187 aaPredicted RBP1.63□□□□□ -2.15
CD44-223ENST00000526553 RTL8AQ9BWD3 113 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 MRPL32Q9BYC8 188 aaKnown RBP1.63□□□□□ -2.15
CD44-223ENST00000526553 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 BCL2L10Q9HD36 194 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 DYNLRB1Q9NP97 96 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 C14orf132Q9NPU4 83 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 CMC2Q9NRP2 79 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 PCTPQ9UKL6 214 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 SPCS1Q9Y6A9 102 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 DYNC2H1Q8NCM8 4307 aaKnown RBP1.63□□□□□ -2.15
CD44-223ENST00000526553 DSPPQ9NZW4 1301 aa1.63□□□□□ -2.15
CD44-223ENST00000526553 DNAH9Q9NYC9 4486 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 TRAV14DV4A0A0A6YYC5 116 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 CEBPZOSA8MTT3 80 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 A8MWV9 139 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 B4DSR2 109 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 LYNX1G3V0Z9 82 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 FXYD1O00168 92 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 NDUFB3O43676 98 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 SSSCA1O60232 199 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 PITX3O75364 302 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 CD3DP04234 171 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 SLC25A5P05141 298 aaKnown RBP1.62□□□□□ -2.15
CD44-223ENST00000526553 IGLC1P0CG04 106 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 LYNX1P0DP58 116 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 BCL2P10415 239 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 UBE2G1P62253 170 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 UBE2L3P68036 154 aaKnown RBP1.62□□□□□ -2.15
CD44-223ENST00000526553 Q56UQ5 140 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 MEIG1Q5JSS6 88 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 TMEM78Q5T7P6 136 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 CYP2G1PQ6ZSU1 146 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 OR5AS1Q8N127 324 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 EXOC3-AS1Q8N2X6 119 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 C18orf32Q8TCD1 76 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 PPDPFLQ8WWR9 84 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 OR2H1Q9GZK4 316 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 TMEM167BQ9NRX6 74 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 MPC1Q9Y5U8 109 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 DNAH3Q8TD57 4116 aa1.62□□□□□ -2.15
CD44-223ENST00000526553 SACSQ9NZJ4 4579 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 IGHV1-24A0A0C4DH33 117 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 C3orf85A0A1B0GTC6 90 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 CTXND1A0A1B0GTU2 59 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 A0A1W2PPM0 123 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 TMEM256-PLSCR3K7ERE1 68 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 UQCRQO14949 82 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 MGST1P10620 155 aaKnown RBP1.61□□□□□ -2.15
CD44-223ENST00000526553 ADCYAP1P18509 176 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 ATP5EP56381 51 aaPredicted RBP1.61□□□□□ -2.15
CD44-223ENST00000526553 PDE6HQ13956 83 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 OR8B8Q15620 311 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 DEFB121Q5J5C9 76 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 C10orf55Q5SWW7 151 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 Q6AWC8 147 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 TMEM91Q6ZNR0 172 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 FOXI2Q6ZQN5 318 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 LINC00311Q8N616 119 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 LSM10Q969L4 123 aaKnown RBP1.61□□□□□ -2.15
CD44-223ENST00000526553 FAM103A1Q9BTL3 118 aaKnown RBP1.61□□□□□ -2.15
CD44-223ENST00000526553 HIGD1BQ9P298 99 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 RYR1P21817 5038 aa1.61□□□□□ -2.15
CD44-223ENST00000526553 TRAV2A0A0B4J234 112 aa1.6□□□□□ -2.15
CD44-223ENST00000526553 A0A1W2PRE2 83 aa1.6□□□□□ -2.15
CD44-223ENST00000526553 OR2T8A6NH00 312 aa1.6□□□□□ -2.15
CD44-223ENST00000526553 C9JAW5 83 aa1.6□□□□□ -2.15
CD44-223ENST00000526553 H3BUT2 72 aa1.6□□□□□ -2.15
CD44-223ENST00000526553 ATOX1O00244 68 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms