RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
LRRK1-204ENST00000525617 IGLV5-45A0A087WSX0 123 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 KRTAP29-1A8MX34 341 aaPredicted RBP9.02□□□□□ -0.97
LRRK1-204ENST00000525617 CXCL5P42830 114 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 Q6ZRP5 223 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 CHCHD1Q96BP2 118 aaKnown RBP9.02□□□□□ -0.97
LRRK1-204ENST00000525617 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
LRRK1-204ENST00000525617 SMIM1B2RUZ4 78 aa9.01□□□□□ -0.97
LRRK1-204ENST00000525617 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
LRRK1-204ENST00000525617 H3BRM9 83 aa9.01□□□□□ -0.97
LRRK1-204ENST00000525617 FAT1Q14517 4588 aa9□□□□□ -0.97
LRRK1-204ENST00000525617 F8VRH5 84 aa9□□□□□ -0.97
LRRK1-204ENST00000525617 OXTP01178 125 aa9□□□□□ -0.97
LRRK1-204ENST00000525617 TRGC2P03986 189 aa8.99□□□□□ -0.97
LRRK1-204ENST00000525617 HNRNPA3P51991 378 aaKnown RBP8.99□□□□□ -0.97
LRRK1-204ENST00000525617 PRR3P79522 188 aaKnown RBP8.99□□□□□ -0.97
LRRK1-204ENST00000525617 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
LRRK1-204ENST00000525617 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
LRRK1-204ENST00000525617 VPS13BQ7Z7G8 4022 aa8.98□□□□□ -0.97
LRRK1-204ENST00000525617 HSBP1O75506 76 aa8.98□□□□□ -0.97
LRRK1-204ENST00000525617 SPINK8P0C7L1 97 aa8.98□□□□□ -0.97
LRRK1-204ENST00000525617 IGLC3P0DOY3 106 aa8.98□□□□□ -0.97
LRRK1-204ENST00000525617 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.98
LRRK1-204ENST00000525617 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
LRRK1-204ENST00000525617 FAM168BA1KXE4 195 aa8.95□□□□□ -0.98
LRRK1-204ENST00000525617 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
LRRK1-204ENST00000525617 IFI27L1Q96BM0 104 aa8.95□□□□□ -0.98
LRRK1-204ENST00000525617 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
LRRK1-204ENST00000525617 COLCA2A8K830 154 aa8.94□□□□□ -0.98
LRRK1-204ENST00000525617 TMEM170BQ5T4T1 132 aa8.94□□□□□ -0.98
LRRK1-204ENST00000525617 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
LRRK1-204ENST00000525617 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
LRRK1-204ENST00000525617 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
LRRK1-204ENST00000525617 TRAV12-1A0A0B4J245 112 aa8.92□□□□□ -0.98
LRRK1-204ENST00000525617 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
LRRK1-204ENST00000525617 C11orf86A6NJI1 115 aa8.92□□□□□ -0.98
LRRK1-204ENST00000525617 M0QXV9 152 aa8.92□□□□□ -0.98
LRRK1-204ENST00000525617 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
LRRK1-204ENST00000525617 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
LRRK1-204ENST00000525617 UBE2BP63146 152 aa8.91□□□□□ -0.98
LRRK1-204ENST00000525617 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
LRRK1-204ENST00000525617 SERF1AO75920 110 aa8.9□□□□□ -0.98
LRRK1-204ENST00000525617 LEPROTL1O95214 131 aa8.9□□□□□ -0.98
LRRK1-204ENST00000525617 C1orf137Q5JT78 98 aa8.9□□□□□ -0.98
LRRK1-204ENST00000525617 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
LRRK1-204ENST00000525617 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
LRRK1-204ENST00000525617 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
LRRK1-204ENST00000525617 H0Y8G0 127 aa8.87□□□□□ -0.99
LRRK1-204ENST00000525617 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
LRRK1-204ENST00000525617 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-204ENST00000525617 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
LRRK1-204ENST00000525617 SCO1O75880 301 aa8.86□□□□□ -0.99
LRRK1-204ENST00000525617 PFN2P35080 140 aa8.86□□□□□ -0.99
LRRK1-204ENST00000525617 LINC00310P59036 64 aa8.86□□□□□ -0.99
LRRK1-204ENST00000525617 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
LRRK1-204ENST00000525617 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
LRRK1-204ENST00000525617 TMEM223A0PJW6 202 aa8.85□□□□□ -0.99
LRRK1-204ENST00000525617 FABP4P15090 132 aa8.85□□□□□ -0.99
LRRK1-204ENST00000525617 COX17Q14061 63 aa8.85□□□□□ -0.99
LRRK1-204ENST00000525617 ERG28Q9UKR5 140 aa8.85□□□□□ -0.99
LRRK1-204ENST00000525617 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
LRRK1-204ENST00000525617 NUPR1O60356 82 aa8.84□□□□□ -0.99
LRRK1-204ENST00000525617 IGLV7-43P04211 117 aa8.84□□□□□ -0.99
LRRK1-204ENST00000525617 ODF1Q14990 250 aa8.84□□□□□ -0.99
LRRK1-204ENST00000525617 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
LRRK1-204ENST00000525617 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
LRRK1-204ENST00000525617 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
LRRK1-204ENST00000525617 PLA2G2DQ9UNK4 145 aa8.84□□□□□ -0.99
LRRK1-204ENST00000525617 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
LRRK1-204ENST00000525617 LINC01600Q96MT4 127 aa8.83□□□□□ -1
LRRK1-204ENST00000525617 NKAPP1Q8N9T2 125 aa8.82□□□□□ -1
LRRK1-204ENST00000525617 DIRC1Q969H9 104 aa8.82□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BKO60814 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BJP06899 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BOP23527 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 PLNP26678 52 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BBP33778 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BDP58876 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BCP62807 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST2H2BEQ16778 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BHQ93079 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BNQ99877 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 HIST1H2BMQ99879 126 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
LRRK1-204ENST00000525617 MT1HL1P0DM35 61 aa8.8□□□□□ -1
LRRK1-204ENST00000525617 SND1-IT1Q9HBX3 110 aa8.8□□□□□ -1
LRRK1-204ENST00000525617 IGLV5-37A0A075B6J1 123 aa8.79□□□□□ -1
LRRK1-204ENST00000525617 ATP6V1G1O75348 118 aa8.79□□□□□ -1
LRRK1-204ENST00000525617 DPM2O94777 84 aa8.79□□□□□ -1
LRRK1-204ENST00000525617 LINC00158P58513 81 aa8.79□□□□□ -1
LRRK1-204ENST00000525617 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
LRRK1-204ENST00000525617 HERVK_113P61574 105 aa8.78□□□□□ -1
LRRK1-204ENST00000525617 HERV-K104P63124 156 aa8.78□□□□□ -1
LRRK1-204ENST00000525617 LINC00167Q96N53 147 aa8.78□□□□□ -1
LRRK1-204ENST00000525617 GAGE10A6NGK3 116 aa8.77□□□□□ -1.01
LRRK1-204ENST00000525617 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms