RNA–Protein interactions for RNA: ENST00000525396.5

CHEK1-207, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-207ENST00000525396 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
CHEK1-207ENST00000525396 TOMM7Q9P0U1 55 aa9.85□□□□□ -0.83
CHEK1-207ENST00000525396 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
CHEK1-207ENST00000525396 Q8IZM0 81 aa9.84□□□□□ -0.83
CHEK1-207ENST00000525396 LINC00310P59036 64 aa9.83□□□□□ -0.84
CHEK1-207ENST00000525396 PACRGQ96M98 296 aaPredicted RBP9.83□□□□□ -0.84
CHEK1-207ENST00000525396 PKHD1L1Q86WI1 4243 aa9.83□□□□□ -0.84
CHEK1-207ENST00000525396 ATP5LO75964 103 aa9.82□□□□□ -0.84
CHEK1-207ENST00000525396 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
CHEK1-207ENST00000525396 NDUFA6P56556 154 aa9.82□□□□□ -0.84
CHEK1-207ENST00000525396 TRBV30A0A0K0K1B3 111 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 PRSS2P07478 247 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 SPINK8P0C7L1 97 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 Q6ZRP5 223 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 BAGE3Q86Y29 109 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 MYCBP2O75592 4640 aa9.81□□□□□ -0.84
CHEK1-207ENST00000525396 HNRNPA3P51991 378 aaKnown RBP9.8□□□□□ -0.84
CHEK1-207ENST00000525396 C9orf116Q5BN46 136 aaPredicted RBP9.8□□□□□ -0.84
CHEK1-207ENST00000525396 LCE2CQ5TA81 110 aa9.8□□□□□ -0.84
CHEK1-207ENST00000525396 FAM19A2Q8N3H0 131 aa9.8□□□□□ -0.84
CHEK1-207ENST00000525396 A0A1W2PNN7 141 aa9.79□□□□□ -0.84
CHEK1-207ENST00000525396 HSBP1O75506 76 aa9.79□□□□□ -0.84
CHEK1-207ENST00000525396 SERF1AO75920 110 aa9.79□□□□□ -0.84
CHEK1-207ENST00000525396 ZNF22P17026 224 aaPredicted RBP9.79□□□□□ -0.84
CHEK1-207ENST00000525396 C6orf226Q5I0X4 101 aa9.79□□□□□ -0.84
CHEK1-207ENST00000525396 CKS1BP61024 79 aa9.78□□□□□ -0.84
CHEK1-207ENST00000525396 C7orf33Q8WU49 177 aa9.78□□□□□ -0.84
CHEK1-207ENST00000525396 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
CHEK1-207ENST00000525396 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
CHEK1-207ENST00000525396 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
CHEK1-207ENST00000525396 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
CHEK1-207ENST00000525396 NDUFC2-KCTD14E9PQ53 114 aa9.76□□□□□ -0.85
CHEK1-207ENST00000525396 F8VRH5 84 aa9.76□□□□□ -0.85
CHEK1-207ENST00000525396 H3BRM9 83 aa9.76□□□□□ -0.85
CHEK1-207ENST00000525396 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
CHEK1-207ENST00000525396 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
CHEK1-207ENST00000525396 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
CHEK1-207ENST00000525396 LOC100996750A0A140TA64 210 aa9.75□□□□□ -0.85
CHEK1-207ENST00000525396 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
CHEK1-207ENST00000525396 NUPR1O60356 82 aa9.75□□□□□ -0.85
CHEK1-207ENST00000525396 CXCL5P42830 114 aa9.75□□□□□ -0.85
CHEK1-207ENST00000525396 KRTAP4-6Q9BYQ5 205 aa9.75□□□□□ -0.85
CHEK1-207ENST00000525396 CHTOPQ9Y3Y2 248 aaKnown RBP9.75□□□□□ -0.85
CHEK1-207ENST00000525396 TRAV12-1A0A0B4J245 112 aa9.74□□□□□ -0.85
CHEK1-207ENST00000525396 PRR3P79522 188 aaKnown RBP9.74□□□□□ -0.85
CHEK1-207ENST00000525396 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
CHEK1-207ENST00000525396 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
CHEK1-207ENST00000525396 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
CHEK1-207ENST00000525396 TMEM170BQ5T4T1 132 aa9.72□□□□□ -0.85
CHEK1-207ENST00000525396 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
CHEK1-207ENST00000525396 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
CHEK1-207ENST00000525396 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
CHEK1-207ENST00000525396 H0Y8G0 127 aa9.69□□□□□ -0.86
CHEK1-207ENST00000525396 ODF1Q14990 250 aa9.69□□□□□ -0.86
CHEK1-207ENST00000525396 XAGE1AQ9HD64 81 aa9.69□□□□□ -0.86
CHEK1-207ENST00000525396 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
CHEK1-207ENST00000525396 FABP4P15090 132 aa9.68□□□□□ -0.86
CHEK1-207ENST00000525396 KRTAP29-1A8MX34 341 aaPredicted RBP9.67□□□□□ -0.86
CHEK1-207ENST00000525396 M0QXV9 152 aa9.67□□□□□ -0.86
CHEK1-207ENST00000525396 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
CHEK1-207ENST00000525396 KRTAP11-1Q8IUC1 163 aa9.67□□□□□ -0.86
CHEK1-207ENST00000525396 PSORS1C2Q9UIG4 136 aa9.66□□□□□ -0.86
CHEK1-207ENST00000525396 HSPB8Q9UJY1 196 aa9.66□□□□□ -0.86
CHEK1-207ENST00000525396 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
CHEK1-207ENST00000525396 LRP1Q07954 4544 aaKnown RBP9.66□□□□□ -0.86
CHEK1-207ENST00000525396 J3QL48 77 aa9.65□□□□□ -0.86
CHEK1-207ENST00000525396 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
CHEK1-207ENST00000525396 ATP6V1G1O75348 118 aa9.64□□□□□ -0.87
CHEK1-207ENST00000525396 HERC1Q15751 4861 aa9.63□□□□□ -0.87
CHEK1-207ENST00000525396 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
CHEK1-207ENST00000525396 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
CHEK1-207ENST00000525396 ERG28Q9UKR5 140 aa9.63□□□□□ -0.87
CHEK1-207ENST00000525396 PFN2P35080 140 aa9.62□□□□□ -0.87
CHEK1-207ENST00000525396 OXTP01178 125 aa9.61□□□□□ -0.87
CHEK1-207ENST00000525396 S100A1P23297 94 aa9.6□□□□□ -0.87
CHEK1-207ENST00000525396 PLNP26678 52 aa9.6□□□□□ -0.87
CHEK1-207ENST00000525396 SRSF9Q13242 221 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHEK1-207ENST00000525396 C1orf137Q5JT78 98 aa9.6□□□□□ -0.87
CHEK1-207ENST00000525396 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
CHEK1-207ENST00000525396 C22orf24Q9Y442 160 aa9.6□□□□□ -0.87
CHEK1-207ENST00000525396 DPM2O94777 84 aa9.59□□□□□ -0.87
CHEK1-207ENST00000525396 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
CHEK1-207ENST00000525396 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
CHEK1-207ENST00000525396 UBE2BP63146 152 aa9.59□□□□□ -0.87
CHEK1-207ENST00000525396 COA6Q5JTJ3 125 aaKnown RBP9.59□□□□□ -0.87
CHEK1-207ENST00000525396 MAP1LC3CQ9BXW4 147 aa9.59□□□□□ -0.87
CHEK1-207ENST00000525396 SPINK6Q6UWN8 80 aa9.58□□□□□ -0.88
CHEK1-207ENST00000525396 PLA2G2DQ9UNK4 145 aa9.58□□□□□ -0.88
CHEK1-207ENST00000525396 IGKCP01834 107 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms