RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SPAG11BQ08648 103 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 CARD19Q96LW7 228 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 CAMK2N2Q96S95 79 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 LINC00310P59036 64 aa7.92□□□□□ -1.14
SMCO4-202ENST00000525141 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
SMCO4-202ENST00000525141 RNF151Q2KHN1 245 aa7.92□□□□□ -1.14
SMCO4-202ENST00000525141 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
SMCO4-202ENST00000525141 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
SMCO4-202ENST00000525141 HMCN2Q8NDA2 5059 aa7.92□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 OXTP01178 125 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 NDUFA6P56556 154 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
SMCO4-202ENST00000525141 Q6ZRU5 148 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 IFI27L1Q96BM0 104 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
SMCO4-202ENST00000525141 MRPL35Q9NZE8 188 aaKnown RBP7.91□□□□□ -1.14
SMCO4-202ENST00000525141 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
SMCO4-202ENST00000525141 NUPR1O60356 82 aa7.9□□□□□ -1.14
SMCO4-202ENST00000525141 IGLC3P0DOY3 106 aa7.9□□□□□ -1.14
SMCO4-202ENST00000525141 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
SMCO4-202ENST00000525141 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
SMCO4-202ENST00000525141 PACRGQ96M98 296 aaPredicted RBP7.9□□□□□ -1.14
SMCO4-202ENST00000525141 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
SMCO4-202ENST00000525141 NDUFA1O15239 70 aa7.89□□□□□ -1.15
SMCO4-202ENST00000525141 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
SMCO4-202ENST00000525141 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
SMCO4-202ENST00000525141 Q8IZM0 81 aa7.89□□□□□ -1.15
SMCO4-202ENST00000525141 LINC00474Q9P2X8 69 aa7.89□□□□□ -1.15
SMCO4-202ENST00000525141 LOC107984640A0A0U1RRK4 108 aa7.88□□□□□ -1.15
SMCO4-202ENST00000525141 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
SMCO4-202ENST00000525141 H3BRM9 83 aa7.88□□□□□ -1.15
SMCO4-202ENST00000525141 PRSS2P07478 247 aa7.88□□□□□ -1.15
SMCO4-202ENST00000525141 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
SMCO4-202ENST00000525141 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
SMCO4-202ENST00000525141 UNQ6190/PRO20217Q6UXQ8 127 aa7.87□□□□□ -1.15
SMCO4-202ENST00000525141 HSPB8Q9UJY1 196 aa7.87□□□□□ -1.15
SMCO4-202ENST00000525141 CHTOPQ9Y3Y2 248 aaKnown RBP7.87□□□□□ -1.15
SMCO4-202ENST00000525141 A0A096LNI7 61 aa7.86□□□□□ -1.15
SMCO4-202ENST00000525141 CKS1BP61024 79 aa7.86□□□□□ -1.15
SMCO4-202ENST00000525141 C10orf25Q5T742 122 aa7.86□□□□□ -1.15
SMCO4-202ENST00000525141 TOMM7Q9P0U1 55 aa7.86□□□□□ -1.15
SMCO4-202ENST00000525141 C11orf86A6NJI1 115 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 F8VRH5 84 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 ZNF22P17026 224 aaPredicted RBP7.85□□□□□ -1.15
SMCO4-202ENST00000525141 CXCL5P42830 114 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 MAJINQ3KP22 176 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 COA6Q5JTJ3 125 aaKnown RBP7.85□□□□□ -1.15
SMCO4-202ENST00000525141 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 COX7B2Q8TF08 81 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 C6orf48Q9UBA6 75 aa7.85□□□□□ -1.15
SMCO4-202ENST00000525141 IGKV2-24A0A0C4DH68 120 aa7.84□□□□□ -1.15
SMCO4-202ENST00000525141 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
SMCO4-202ENST00000525141 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
SMCO4-202ENST00000525141 FABP4P15090 132 aa7.84□□□□□ -1.15
SMCO4-202ENST00000525141 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
SMCO4-202ENST00000525141 ODF1Q14990 250 aa7.83□□□□□ -1.16
SMCO4-202ENST00000525141 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
SMCO4-202ENST00000525141 STPG4Q8N801 248 aa7.83□□□□□ -1.16
SMCO4-202ENST00000525141 UBR4Q5T4S7 5183 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 SERTAD4-AS1Q5TG53 156 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 KRTAP4-12Q9BQ66 201 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 MAP1LC3CQ9BXW4 147 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 TNXBP22105 4242 aa7.82□□□□□ -1.16
SMCO4-202ENST00000525141 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
SMCO4-202ENST00000525141 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
SMCO4-202ENST00000525141 Q6ZRP5 223 aa7.81□□□□□ -1.16
SMCO4-202ENST00000525141 TMEM223A0PJW6 202 aa7.8□□□□□ -1.16
SMCO4-202ENST00000525141 H0Y8G0 127 aa7.8□□□□□ -1.16
SMCO4-202ENST00000525141 C9orf116Q5BN46 136 aaPredicted RBP7.8□□□□□ -1.16
SMCO4-202ENST00000525141 A0A1W2PNN7 141 aa7.79□□□□□ -1.16
SMCO4-202ENST00000525141 PLNP26678 52 aa7.79□□□□□ -1.16
SMCO4-202ENST00000525141 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMCO4-202ENST00000525141 DPM2O94777 84 aa7.78□□□□□ -1.16
SMCO4-202ENST00000525141 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
SMCO4-202ENST00000525141 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
SMCO4-202ENST00000525141 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
SMCO4-202ENST00000525141 GAGE2EQ4V326 116 aa7.77□□□□□ -1.17
SMCO4-202ENST00000525141 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
SMCO4-202ENST00000525141 GAGE2DQ9UEU5 116 aa7.77□□□□□ -1.17
SMCO4-202ENST00000525141 IGKCP01834 107 aa7.75□□□□□ -1.17
SMCO4-202ENST00000525141 COX17Q14061 63 aa7.75□□□□□ -1.17
SMCO4-202ENST00000525141 PET117Q6UWS5 81 aa7.75□□□□□ -1.17
SMCO4-202ENST00000525141 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
SMCO4-202ENST00000525141 C9orf129Q5T035 196 aaKnown RBP7.74□□□□□ -1.17
SMCO4-202ENST00000525141 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
SMCO4-202ENST00000525141 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms