RNA–Protein interactions for RNA: ENST00000525095.2

VPS26B-202, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26B, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-202ENST00000525095 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
VPS26B-202ENST00000525095 GVQW2A0A096LPI5 108 aaPredicted RBP12.27□□□□□ -0.44
VPS26B-202ENST00000525095 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.44
VPS26B-202ENST00000525095 Q6ZRN7 208 aaPredicted RBP12.26□□□□□ -0.45
VPS26B-202ENST00000525095 LECT2O14960 151 aa12.26□□□□□ -0.45
VPS26B-202ENST00000525095 CTAG1AP78358 180 aa12.26□□□□□ -0.45
VPS26B-202ENST00000525095 UNQ6190/PRO20217Q6UXQ8 127 aa12.24□□□□□ -0.45
VPS26B-202ENST00000525095 C2orf48Q96LS8 159 aa12.24□□□□□ -0.45
VPS26B-202ENST00000525095 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
VPS26B-202ENST00000525095 MEIG1Q5JSS6 88 aa12.23□□□□□ -0.45
VPS26B-202ENST00000525095 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
VPS26B-202ENST00000525095 CIRBPQ14011 172 aaKnown RBP12.22□□□□□ -0.45
VPS26B-202ENST00000525095 WFDC2Q14508 124 aa12.22□□□□□ -0.45
VPS26B-202ENST00000525095 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
VPS26B-202ENST00000525095 LITAFQ99732 161 aa12.22□□□□□ -0.45
VPS26B-202ENST00000525095 TMEM238C9JI98 176 aa12.22□□□□□ -0.45
VPS26B-202ENST00000525095 TIMM17BO60830 172 aa12.22□□□□□ -0.45
VPS26B-202ENST00000525095 C1orf134Q5TEV5 83 aa12.22□□□□□ -0.45
VPS26B-202ENST00000525095 A0A0U1RRA0 63 aa12.21□□□□□ -0.46
VPS26B-202ENST00000525095 LINC00587B1AMM8 73 aa12.21□□□□□ -0.46
VPS26B-202ENST00000525095 F8WDY8 70 aa12.21□□□□□ -0.46
VPS26B-202ENST00000525095 SMIM13P0DJ93 91 aa12.21□□□□□ -0.46
VPS26B-202ENST00000525095 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.46
VPS26B-202ENST00000525095 ADAMTSL4-AS1Q5T5F5 129 aa12.21□□□□□ -0.46
VPS26B-202ENST00000525095 HIST1H4GQ99525 98 aa12.21□□□□□ -0.46
VPS26B-202ENST00000525095 SPANXB1Q9NS25 103 aaPredicted RBP12.21□□□□□ -0.46
VPS26B-202ENST00000525095 ERG28Q9UKR5 140 aa12.2□□□□□ -0.46
VPS26B-202ENST00000525095 HSD52Q0P140 79 aa12.19□□□□□ -0.46
VPS26B-202ENST00000525095 KMT2AQ03164 3969 aa12.19□□□□□ -0.46
VPS26B-202ENST00000525095 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 PFN2P35080 140 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 SYCNQ0VAF6 134 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 TAL2Q16559 108 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 C9orf116Q5BN46 136 aaPredicted RBP12.18□□□□□ -0.46
VPS26B-202ENST00000525095 Q6ZRU5 148 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 C6orf48Q9UBA6 75 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 DNAH10Q8IVF4 4471 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 TRBV30A0A0K0K1B3 111 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 LINC00158P58513 81 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 DAND5Q8N907 189 aa12.18□□□□□ -0.46
VPS26B-202ENST00000525095 LCE6AA0A183 80 aa12.17□□□□□ -0.46
VPS26B-202ENST00000525095 SLPIP03973 132 aa12.17□□□□□ -0.46
VPS26B-202ENST00000525095 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
VPS26B-202ENST00000525095 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
VPS26B-202ENST00000525095 SPANXCQ9NY87 97 aa12.17□□□□□ -0.46
VPS26B-202ENST00000525095 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
VPS26B-202ENST00000525095 COX17Q14061 63 aa12.16□□□□□ -0.46
VPS26B-202ENST00000525095 Q6ZVH6 145 aa12.15□□□□□ -0.46
VPS26B-202ENST00000525095 CEND1Q8N111 149 aa12.15□□□□□ -0.46
VPS26B-202ENST00000525095 GCSHP23434 173 aa12.14□□□□□ -0.47
VPS26B-202ENST00000525095 MIR7-3HGQ8N6C7 128 aa12.14□□□□□ -0.47
VPS26B-202ENST00000525095 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
VPS26B-202ENST00000525095 DNAH6Q9C0G6 4158 aa12.13□□□□□ -0.47
VPS26B-202ENST00000525095 M0R143 59 aa12.13□□□□□ -0.47
VPS26B-202ENST00000525095 NPC2P61916 151 aa12.13□□□□□ -0.47
VPS26B-202ENST00000525095 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
VPS26B-202ENST00000525095 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
VPS26B-202ENST00000525095 A0A087WTM6 91 aa12.12□□□□□ -0.47
VPS26B-202ENST00000525095 IFITM1P13164 125 aa12.11□□□□□ -0.47
VPS26B-202ENST00000525095 RNF151Q2KHN1 245 aa12.11□□□□□ -0.47
VPS26B-202ENST00000525095 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
VPS26B-202ENST00000525095 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
VPS26B-202ENST00000525095 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.1□□□□□ -0.47
VPS26B-202ENST00000525095 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
VPS26B-202ENST00000525095 FXYD2P54710 66 aa12.1□□□□□ -0.47
VPS26B-202ENST00000525095 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
VPS26B-202ENST00000525095 BATFQ16520 125 aa12.1□□□□□ -0.47
VPS26B-202ENST00000525095 SNHG12Q9BXW3 62 aa12.1□□□□□ -0.47
VPS26B-202ENST00000525095 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-202ENST00000525095 Q8N814 137 aa12.09□□□□□ -0.47
VPS26B-202ENST00000525095 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-202ENST00000525095 SOSTDC1Q6X4U4 206 aa12.09□□□□□ -0.47
VPS26B-202ENST00000525095 RTL8CO15255 209 aa12.08□□□□□ -0.48
VPS26B-202ENST00000525095 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
VPS26B-202ENST00000525095 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
VPS26B-202ENST00000525095 NDUFC2-KCTD14E9PQ53 114 aa12.07□□□□□ -0.48
VPS26B-202ENST00000525095 EREGO14944 169 aa12.07□□□□□ -0.48
VPS26B-202ENST00000525095 SND1-IT1Q9HBX3 110 aa12.07□□□□□ -0.48
VPS26B-202ENST00000525095 SACSQ9NZJ4 4579 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 A4D1N5 150 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 TNP2Q05952 138 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 HYDINQ4G0P3 5121 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 TMEM238LA0A1B0GVL6 79 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 A6NJY4 79 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 TLX1NBP0CAT3 122 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
VPS26B-202ENST00000525095 LOC107984156A0A0G2JMH3 177 aa12.04□□□□□ -0.48
VPS26B-202ENST00000525095 Q6ZRP5 223 aa12.04□□□□□ -0.48
VPS26B-202ENST00000525095 ARL17AQ8IVW1 177 aa12.04□□□□□ -0.48
VPS26B-202ENST00000525095 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
VPS26B-202ENST00000525095 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
VPS26B-202ENST00000525095 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
VPS26B-202ENST00000525095 XAGE1AQ9HD64 81 aa12.02□□□□□ -0.49
VPS26B-202ENST00000525095 NHP2Q9NX24 153 aaKnown RBP12.02□□□□□ -0.49
VPS26B-202ENST00000525095 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
VPS26B-202ENST00000525095 A6NDN8 102 aa12.01□□□□□ -0.49
VPS26B-202ENST00000525095 C9orf163Q8N9P6 203 aa12.01□□□□□ -0.49
VPS26B-202ENST00000525095 DNAH17Q9UFH2 4485 aa12.01□□□□□ -0.49
VPS26B-202ENST00000525095 CFC1BP0CG36 223 aa11.99□□□□□ -0.49
VPS26B-202ENST00000525095 CFC1P0CG37 223 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms