RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SFTA2Q6UW10 78 aa10.37□□□□□ -0.75
TSPAN4-213ENST00000524895 C2orf82Q6UX34 121 aa10.37□□□□□ -0.75
TSPAN4-213ENST00000524895 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
TSPAN4-213ENST00000524895 F8WDY8 70 aa10.36□□□□□ -0.75
TSPAN4-213ENST00000524895 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
TSPAN4-213ENST00000524895 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
TSPAN4-213ENST00000524895 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
TSPAN4-213ENST00000524895 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
TSPAN4-213ENST00000524895 C12orf57Q99622 126 aa10.35□□□□□ -0.75
TSPAN4-213ENST00000524895 TTTY13Q9BZ97 58 aa10.35□□□□□ -0.75
TSPAN4-213ENST00000524895 FRAS1Q86XX4 4008 aa10.34□□□□□ -0.75
TSPAN4-213ENST00000524895 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
TSPAN4-213ENST00000524895 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
TSPAN4-213ENST00000524895 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
TSPAN4-213ENST00000524895 CARD19Q96LW7 228 aa10.34□□□□□ -0.75
TSPAN4-213ENST00000524895 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
TSPAN4-213ENST00000524895 CNBPP62633 177 aaKnown RBP10.33□□□□□ -0.76
TSPAN4-213ENST00000524895 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
TSPAN4-213ENST00000524895 Q6ZRU5 148 aa10.33□□□□□ -0.76
TSPAN4-213ENST00000524895 SLPIP03973 132 aa10.32□□□□□ -0.76
TSPAN4-213ENST00000524895 HERV-K104P63124 156 aa10.32□□□□□ -0.76
TSPAN4-213ENST00000524895 DNAH17Q9UFH2 4485 aa10.32□□□□□ -0.76
TSPAN4-213ENST00000524895 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
TSPAN4-213ENST00000524895 COX8AP10176 69 aa10.31□□□□□ -0.76
TSPAN4-213ENST00000524895 C14orf144Q96I85 54 aa10.31□□□□□ -0.76
TSPAN4-213ENST00000524895 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
TSPAN4-213ENST00000524895 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
TSPAN4-213ENST00000524895 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
TSPAN4-213ENST00000524895 SLC25A34Q6PIV7 304 aa10.29□□□□□ -0.76
TSPAN4-213ENST00000524895 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
TSPAN4-213ENST00000524895 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
TSPAN4-213ENST00000524895 IGLV5-52A0A0A0MRZ9 124 aa10.28□□□□□ -0.76
TSPAN4-213ENST00000524895 A0A0J9YXY3 114 aa10.28□□□□□ -0.76
TSPAN4-213ENST00000524895 RNF151Q2KHN1 245 aa10.28□□□□□ -0.76
TSPAN4-213ENST00000524895 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
TSPAN4-213ENST00000524895 TP73-AS1Q9UF72 201 aa10.28□□□□□ -0.76
TSPAN4-213ENST00000524895 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
TSPAN4-213ENST00000524895 DLEU1O43261 78 aa10.27□□□□□ -0.77
TSPAN4-213ENST00000524895 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
TSPAN4-213ENST00000524895 PFN2P35080 140 aa10.26□□□□□ -0.77
TSPAN4-213ENST00000524895 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.77
TSPAN4-213ENST00000524895 CIRBPQ14011 172 aaKnown RBP10.26□□□□□ -0.77
TSPAN4-213ENST00000524895 A0A0U1RRA0 63 aa10.25□□□□□ -0.77
TSPAN4-213ENST00000524895 SMIM13P0DJ93 91 aa10.25□□□□□ -0.77
TSPAN4-213ENST00000524895 LINC00158P58513 81 aa10.25□□□□□ -0.77
TSPAN4-213ENST00000524895 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
TSPAN4-213ENST00000524895 PRO1933Q9H354 126 aa10.25□□□□□ -0.77
TSPAN4-213ENST00000524895 RYR3Q15413 4870 aa10.25□□□□□ -0.77
TSPAN4-213ENST00000524895 FAT2Q9NYQ8 4349 aa10.24□□□□□ -0.77
TSPAN4-213ENST00000524895 KRTAP10-2P60368 255 aa10.24□□□□□ -0.77
TSPAN4-213ENST00000524895 COX17Q14061 63 aa10.24□□□□□ -0.77
TSPAN4-213ENST00000524895 PGPEP1Q9NXJ5 209 aa10.24□□□□□ -0.77
TSPAN4-213ENST00000524895 UQCR10Q9UDW1 63 aa10.24□□□□□ -0.77
TSPAN4-213ENST00000524895 PKIGQ9Y2B9 76 aa10.24□□□□□ -0.77
TSPAN4-213ENST00000524895 LOC107984640A0A0U1RRK4 108 aa10.23□□□□□ -0.77
TSPAN4-213ENST00000524895 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
TSPAN4-213ENST00000524895 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
TSPAN4-213ENST00000524895 TIMM17BO60830 172 aa10.23□□□□□ -0.77
TSPAN4-213ENST00000524895 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
TSPAN4-213ENST00000524895 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
TSPAN4-213ENST00000524895 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
TSPAN4-213ENST00000524895 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.77
TSPAN4-213ENST00000524895 A0A1B0GVY2 172 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 GAGE2EQ4V326 116 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 Q6ZRP5 223 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 MIR7-3HGQ8N6C7 128 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 DAND5Q8N907 189 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 LITAFQ99732 161 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 GAGE2DQ9UEU5 116 aa10.2□□□□□ -0.78
TSPAN4-213ENST00000524895 GAGE2BQ13066 116 aa10.19□□□□□ -0.78
TSPAN4-213ENST00000524895 ADAMTSL4-AS1Q5T5F5 129 aa10.19□□□□□ -0.78
TSPAN4-213ENST00000524895 C2orf91Q6ZV80 131 aa10.19□□□□□ -0.78
TSPAN4-213ENST00000524895 MIEN1Q9BRT3 115 aa10.19□□□□□ -0.78
TSPAN4-213ENST00000524895 HECTD4Q9Y4D8 3996 aa10.19□□□□□ -0.78
TSPAN4-213ENST00000524895 DNAH11Q96DT5 4516 aa10.18□□□□□ -0.78
TSPAN4-213ENST00000524895 PKD1P98161 4303 aa10.18□□□□□ -0.78
TSPAN4-213ENST00000524895 GCSHP23434 173 aa10.18□□□□□ -0.78
TSPAN4-213ENST00000524895 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
TSPAN4-213ENST00000524895 A0A096LNI7 61 aa10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 HNRNPA3P51991 378 aaKnown RBP10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 SND1-IT1Q9HBX3 110 aa10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 SPANXCQ9NY87 97 aa10.17□□□□□ -0.78
TSPAN4-213ENST00000524895 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
TSPAN4-213ENST00000524895 PTTG1IPP53801 180 aa10.16□□□□□ -0.78
TSPAN4-213ENST00000524895 NPC2P61916 151 aa10.16□□□□□ -0.78
TSPAN4-213ENST00000524895 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
TSPAN4-213ENST00000524895 Q6ZVH6 145 aa10.15□□□□□ -0.78
TSPAN4-213ENST00000524895 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
TSPAN4-213ENST00000524895 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
TSPAN4-213ENST00000524895 COPS9Q8WXC6 57 aa10.14□□□□□ -0.79
TSPAN4-213ENST00000524895 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
TSPAN4-213ENST00000524895 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
TSPAN4-213ENST00000524895 IFITM1P13164 125 aa10.12□□□□□ -0.79
TSPAN4-213ENST00000524895 C9orf129Q5T035 196 aaKnown RBP10.12□□□□□ -0.79
TSPAN4-213ENST00000524895 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms