RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 IGLV5-39A0A0G2JS06 123 aa7.49□□□□□ -1.21
CLN8-207ENST00000524258 SERF1AO75920 110 aa7.49□□□□□ -1.21
CLN8-207ENST00000524258 PLA2G1BP04054 148 aaKnown RBP7.49□□□□□ -1.21
CLN8-207ENST00000524258 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
CLN8-207ENST00000524258 Q6ZRP5 223 aa7.49□□□□□ -1.21
CLN8-207ENST00000524258 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
CLN8-207ENST00000524258 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
CLN8-207ENST00000524258 TRBV30A0A0K0K1B3 111 aa7.48□□□□□ -1.21
CLN8-207ENST00000524258 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
CLN8-207ENST00000524258 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
CLN8-207ENST00000524258 C9orf116Q5BN46 136 aaPredicted RBP7.48□□□□□ -1.21
CLN8-207ENST00000524258 BAGE3Q86Y29 109 aa7.48□□□□□ -1.21
CLN8-207ENST00000524258 KRTAP7-1Q8IUC3 87 aa7.48□□□□□ -1.21
CLN8-207ENST00000524258 PKIGQ9Y2B9 76 aa7.48□□□□□ -1.21
CLN8-207ENST00000524258 TRAV12-1A0A0B4J245 112 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 C11orf86A6NJI1 115 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 SPINK8P0C7L1 97 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 C6orf226Q5I0X4 101 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 IFI27L1Q96BM0 104 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 DPH3Q96FX2 82 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
CLN8-207ENST00000524258 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HSBP1O75506 76 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
CLN8-207ENST00000524258 NDUFA6P56556 154 aa7.45□□□□□ -1.22
CLN8-207ENST00000524258 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
CLN8-207ENST00000524258 COX7B2Q8TF08 81 aa7.45□□□□□ -1.22
CLN8-207ENST00000524258 PACRGQ96M98 296 aaPredicted RBP7.45□□□□□ -1.22
CLN8-207ENST00000524258 NDUFC2-KCTD14E9PQ53 114 aa7.44□□□□□ -1.22
CLN8-207ENST00000524258 F8VRH5 84 aa7.44□□□□□ -1.22
CLN8-207ENST00000524258 PRSS2P07478 247 aa7.44□□□□□ -1.22
CLN8-207ENST00000524258 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
CLN8-207ENST00000524258 CHTOPQ9Y3Y2 248 aaKnown RBP7.44□□□□□ -1.22
CLN8-207ENST00000524258 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
CLN8-207ENST00000524258 HERC1Q15751 4861 aa7.43□□□□□ -1.22
CLN8-207ENST00000524258 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
CLN8-207ENST00000524258 CXCL5P42830 114 aa7.43□□□□□ -1.22
CLN8-207ENST00000524258 CKS1BP61024 79 aa7.43□□□□□ -1.22
CLN8-207ENST00000524258 ODF1Q14990 250 aa7.43□□□□□ -1.22
CLN8-207ENST00000524258 H3BRM9 83 aa7.42□□□□□ -1.22
CLN8-207ENST00000524258 GAGE2EQ4V326 116 aa7.42□□□□□ -1.22
CLN8-207ENST00000524258 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
CLN8-207ENST00000524258 GAGE2DQ9UEU5 116 aa7.42□□□□□ -1.22
CLN8-207ENST00000524258 TMEM223A0PJW6 202 aa7.41□□□□□ -1.22
CLN8-207ENST00000524258 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
CLN8-207ENST00000524258 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
CLN8-207ENST00000524258 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.22
CLN8-207ENST00000524258 PHF5AQ7RTV0 110 aaKnown RBP7.4□□□□□ -1.22
CLN8-207ENST00000524258 C7orf33Q8WU49 177 aa7.4□□□□□ -1.22
CLN8-207ENST00000524258 ZNF625Q96I27 306 aaPredicted RBP7.4□□□□□ -1.22
CLN8-207ENST00000524258 ATP6V1G1O75348 118 aa7.39□□□□□ -1.23
CLN8-207ENST00000524258 FABP4P15090 132 aa7.39□□□□□ -1.23
CLN8-207ENST00000524258 TMEM170BQ5T4T1 132 aa7.39□□□□□ -1.23
CLN8-207ENST00000524258 KRTAP29-1A8MX34 341 aaPredicted RBP7.38□□□□□ -1.23
CLN8-207ENST00000524258 S100A1P23297 94 aa7.38□□□□□ -1.23
CLN8-207ENST00000524258 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLN8-207ENST00000524258 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
CLN8-207ENST00000524258 XAGE1AQ9HD64 81 aa7.38□□□□□ -1.23
CLN8-207ENST00000524258 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
CLN8-207ENST00000524258 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
CLN8-207ENST00000524258 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
CLN8-207ENST00000524258 PMCHL2Q9BQD1 86 aa7.35□□□□□ -1.23
CLN8-207ENST00000524258 PLA2G2DQ9UNK4 145 aa7.35□□□□□ -1.23
CLN8-207ENST00000524258 TNXBP22105 4242 aa7.35□□□□□ -1.23
CLN8-207ENST00000524258 H0Y8G0 127 aa7.34□□□□□ -1.23
CLN8-207ENST00000524258 TSPEAR-AS2P59090 65 aa7.34□□□□□ -1.23
CLN8-207ENST00000524258 IGLV5-37A0A075B6J1 123 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 SYS1-DBNDD2H3BUS1 97 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 M0QXV9 152 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 OXTP01178 125 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 Q8NDZ9 215 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
CLN8-207ENST00000524258 DPM2O94777 84 aa7.32□□□□□ -1.24
CLN8-207ENST00000524258 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
CLN8-207ENST00000524258 PLNP26678 52 aa7.32□□□□□ -1.24
CLN8-207ENST00000524258 COX17Q14061 63 aa7.32□□□□□ -1.24
CLN8-207ENST00000524258 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
CLN8-207ENST00000524258 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
CLN8-207ENST00000524258 IGKCP01834 107 aa7.31□□□□□ -1.24
CLN8-207ENST00000524258 PFN2P35080 140 aa7.31□□□□□ -1.24
CLN8-207ENST00000524258 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
CLN8-207ENST00000524258 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
CLN8-207ENST00000524258 SND1-IT1Q9HBX3 110 aa7.31□□□□□ -1.24
CLN8-207ENST00000524258 LEPROTO15243 131 aa7.3□□□□□ -1.24
CLN8-207ENST00000524258 C3orf79P0CE67 100 aa7.3□□□□□ -1.24
CLN8-207ENST00000524258 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
CLN8-207ENST00000524258 VPREB1P12018 145 aa7.29□□□□□ -1.24
CLN8-207ENST00000524258 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms