RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 A0A096LNJ9 63 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 IGHV3-73A0A0B4J1V6 119 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 TRBV6-5A0A0K0K1A5 114 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 TRBV27A0A0K0K1C4 114 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 A6NDN8 102 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 F8VRH5 84 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 UBE2L6O14933 153 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 COX8AP10176 69 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 PMVKQ15126 192 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 ZFP2Q6ZN57 461 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 MRPL55Q7Z7F7 128 aaKnown RBP1.66□□□□□ -2.14
LINC01339-204ENST00000524094 C3orf56Q8N813 242 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 OR11H2Q8NH07 326 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 TOMM6Q96B49 74 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 TIMM17AQ99595 171 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 C2orf88Q9BSF0 95 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 MRPL16Q9NX20 251 aaKnown RBP1.66□□□□□ -2.14
LINC01339-204ENST00000524094 CELA1Q9UNI1 258 aa1.66□□□□□ -2.14
LINC01339-204ENST00000524094 MRPS16Q9Y3D3 137 aaKnown RBP1.66□□□□□ -2.14
LINC01339-204ENST00000524094 TRBV7-3A0A075B6L6 115 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 TRAV4A0A0B4J268 109 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 TRGV4A0A0C4DH28 118 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 TRBV10-1A0A0K0K1A3 114 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 M0QXV9 152 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 M0QY20 66 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 IGHV3-53P01767 116 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 CRYGDP07320 174 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 HINT1P49773 126 aaPredicted RBP1.65□□□□□ -2.15
LINC01339-204ENST00000524094 POLR2KP53803 58 aaKnown RBP1.65□□□□□ -2.15
LINC01339-204ENST00000524094 HSD52Q0P140 79 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 RBMY1FQ15415 496 aaKnown RBP1.65□□□□□ -2.15
LINC01339-204ENST00000524094 TMEM170BQ5T4T1 132 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 CFAP126Q5VTH2 177 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 AMMECR1LQ6DCA0 310 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 SCGB1D4Q6XE38 83 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 NEGR1Q7Z3B1 354 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 DAZ4Q86SG3 579 aaKnown RBP1.65□□□□□ -2.15
LINC01339-204ENST00000524094 PRADC1Q9BSG0 188 aa1.65□□□□□ -2.15
LINC01339-204ENST00000524094 NOP10Q9NPE3 64 aaKnown RBP1.65□□□□□ -2.15
LINC01339-204ENST00000524094 MRPL35Q9NZE8 188 aaKnown RBP1.65□□□□□ -2.15
LINC01339-204ENST00000524094 SACSQ9NZJ4 4579 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.64□□□□□ -2.15
LINC01339-204ENST00000524094 TRBV25-1A0A075B6N4 114 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 TRAV8-6A0A0B4J262 113 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 A0A0J9YXV3 536 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 ZNF815PA8K554 130 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 H3BRM9 83 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 DLEU1O43261 78 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 DEFB130BP0DP73 79 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 DEFB130AP0DP74 79 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 MIFP14174 115 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 LGALS3P17931 250 aaKnown RBP1.64□□□□□ -2.15
LINC01339-204ENST00000524094 CRYBA4P53673 196 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 EMP1P54849 157 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 TCTAP57738 103 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 LINC00315P59091 139 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 RPL39P62891 51 aaKnown RBP1.64□□□□□ -2.15
LINC01339-204ENST00000524094 SEC11AP67812 179 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 Q6ZTI0 123 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 SH2D6Q7Z4S9 175 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 CAMK2N1Q7Z7J9 78 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 C1orf158Q8N1D5 194 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 ZNRF2Q8NHG8 242 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 COPS9Q8WXC6 57 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 SNHG12Q9BXW3 62 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 WFDC10AQ9H1F0 79 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 SPANXA1Q9NS26 97 aa1.64□□□□□ -2.15
LINC01339-204ENST00000524094 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.63□□□□□ -2.15
LINC01339-204ENST00000524094 A0A0U1RQV1 116 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 MYMXA0A1B0GTQ4 84 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 A0A1B0GV90 55 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 TRBV6-4A0A1B0GX49 114 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
LINC01339-204ENST00000524094 IGIPA6NJ69 53 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 C11orf86A6NJI1 115 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 TMEM238C9JI98 176 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 CCL25O15444 150 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 SMIM13P0DJ93 91 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 P0DMU3 169 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 FAM231AP0DMU4 169 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 FAM231CP0DMU5 169 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 ZNF25P17030 456 aaPredicted RBP1.63□□□□□ -2.15
LINC01339-204ENST00000524094 UBE2D3P61077 147 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 DAD1P61803 113 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 UBE2D2P62837 147 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 HERVK_113P63121 156 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 RPL18AQ02543 176 aaKnown RBP1.63□□□□□ -2.15
LINC01339-204ENST00000524094 DEFB135Q30KP9 77 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 MPV17L2Q567V2 206 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 BVES-AS1Q5T3Y7 98 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 LYRM7Q5U5X0 104 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 GTF2H5Q6ZYL4 71 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 PCP2Q8IVA1 136 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 SLC25A29Q8N8R3 303 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 OR5A1Q8NGJ0 315 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 ORAOV1Q8WV07 137 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 PLEKHB2Q96CS7 222 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 TMEM243Q9BU79 118 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 TIMM21Q9BVV7 248 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms