RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PMCHL1Q16048 86 aa10.36□□□□□ -0.75
PABPC1-221ENST00000522720 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
PABPC1-221ENST00000522720 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
PABPC1-221ENST00000522720 F8WDY8 70 aa10.35□□□□□ -0.75
PABPC1-221ENST00000522720 RNF151Q2KHN1 245 aa10.35□□□□□ -0.75
PABPC1-221ENST00000522720 STPG4Q8N801 248 aa10.35□□□□□ -0.75
PABPC1-221ENST00000522720 A0A096LNJ9 63 aa10.34□□□□□ -0.75
PABPC1-221ENST00000522720 FABP4P15090 132 aa10.34□□□□□ -0.75
PABPC1-221ENST00000522720 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
PABPC1-221ENST00000522720 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
PABPC1-221ENST00000522720 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
PABPC1-221ENST00000522720 MAP1LC3CQ9BXW4 147 aa10.34□□□□□ -0.75
PABPC1-221ENST00000522720 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
PABPC1-221ENST00000522720 NDUFA1O15239 70 aa10.32□□□□□ -0.76
PABPC1-221ENST00000522720 PTTG1IPP53801 180 aa10.32□□□□□ -0.76
PABPC1-221ENST00000522720 SEC11AP67812 179 aa10.32□□□□□ -0.76
PABPC1-221ENST00000522720 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
PABPC1-221ENST00000522720 KIAA0087Q14695 138 aa10.32□□□□□ -0.76
PABPC1-221ENST00000522720 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
PABPC1-221ENST00000522720 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
PABPC1-221ENST00000522720 AKR1D1P51857 326 aa10.3□□□□□ -0.76
PABPC1-221ENST00000522720 HERVK_113P63121 156 aa10.3□□□□□ -0.76
PABPC1-221ENST00000522720 C10orf25Q5T742 122 aa10.3□□□□□ -0.76
PABPC1-221ENST00000522720 UNQ6190/PRO20217Q6UXQ8 127 aa10.3□□□□□ -0.76
PABPC1-221ENST00000522720 C7orf33Q8WU49 177 aa10.3□□□□□ -0.76
PABPC1-221ENST00000522720 PMVKQ15126 192 aa10.29□□□□□ -0.76
PABPC1-221ENST00000522720 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
PABPC1-221ENST00000522720 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
PABPC1-221ENST00000522720 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
PABPC1-221ENST00000522720 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
PABPC1-221ENST00000522720 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
PABPC1-221ENST00000522720 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
PABPC1-221ENST00000522720 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
PABPC1-221ENST00000522720 RPL18AQ02543 176 aaKnown RBP10.27□□□□□ -0.77
PABPC1-221ENST00000522720 CST9LQ9H4G1 147 aa10.27□□□□□ -0.77
PABPC1-221ENST00000522720 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.77
PABPC1-221ENST00000522720 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
PABPC1-221ENST00000522720 C20orf202A1L168 122 aa10.26□□□□□ -0.77
PABPC1-221ENST00000522720 SYS1-DBNDD2H3BUS1 97 aa10.26□□□□□ -0.77
PABPC1-221ENST00000522720 KRTDAPP60985 99 aa10.26□□□□□ -0.77
PABPC1-221ENST00000522720 C2orf82Q6UX34 121 aa10.26□□□□□ -0.77
PABPC1-221ENST00000522720 TRBV30A0A0K0K1B3 111 aa10.25□□□□□ -0.77
PABPC1-221ENST00000522720 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
PABPC1-221ENST00000522720 PRSS2P07478 247 aa10.25□□□□□ -0.77
PABPC1-221ENST00000522720 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
PABPC1-221ENST00000522720 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-221ENST00000522720 LRP1Q07954 4544 aaKnown RBP10.24□□□□□ -0.77
PABPC1-221ENST00000522720 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
PABPC1-221ENST00000522720 HERC1Q15751 4861 aa10.24□□□□□ -0.77
PABPC1-221ENST00000522720 Q6ZRP5 223 aa10.24□□□□□ -0.77
PABPC1-221ENST00000522720 Q8IZM0 81 aa10.24□□□□□ -0.77
PABPC1-221ENST00000522720 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
PABPC1-221ENST00000522720 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
PABPC1-221ENST00000522720 J3QL48 77 aa10.23□□□□□ -0.77
PABPC1-221ENST00000522720 C6orf226Q5I0X4 101 aa10.23□□□□□ -0.77
PABPC1-221ENST00000522720 LINC00469Q8N7U9 141 aa10.23□□□□□ -0.77
PABPC1-221ENST00000522720 CHTOPQ9Y3Y2 248 aaKnown RBP10.23□□□□□ -0.77
PABPC1-221ENST00000522720 H0Y8G0 127 aa10.22□□□□□ -0.77
PABPC1-221ENST00000522720 OXTP01178 125 aa10.22□□□□□ -0.77
PABPC1-221ENST00000522720 CKS1BP61024 79 aa10.22□□□□□ -0.77
PABPC1-221ENST00000522720 F8VRH5 84 aa10.21□□□□□ -0.77
PABPC1-221ENST00000522720 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.77
PABPC1-221ENST00000522720 SMIM1B2RUZ4 78 aa10.2□□□□□ -0.78
PABPC1-221ENST00000522720 NDUFC2-KCTD14E9PQ53 114 aa10.2□□□□□ -0.78
PABPC1-221ENST00000522720 SCGB1D1O95968 90 aa10.2□□□□□ -0.78
PABPC1-221ENST00000522720 PLNP26678 52 aa10.2□□□□□ -0.78
PABPC1-221ENST00000522720 LINC01545Q5VT33 79 aa10.2□□□□□ -0.78
PABPC1-221ENST00000522720 FAT3Q8TDW7 4589 aa10.2□□□□□ -0.78
PABPC1-221ENST00000522720 DPM2O94777 84 aa10.19□□□□□ -0.78
PABPC1-221ENST00000522720 ODF1Q14990 250 aa10.19□□□□□ -0.78
PABPC1-221ENST00000522720 GAGE2EQ4V326 116 aa10.19□□□□□ -0.78
PABPC1-221ENST00000522720 GAGE2DQ9UEU5 116 aa10.19□□□□□ -0.78
PABPC1-221ENST00000522720 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
PABPC1-221ENST00000522720 IGKCP01834 107 aa10.17□□□□□ -0.78
PABPC1-221ENST00000522720 CXCL5P42830 114 aa10.17□□□□□ -0.78
PABPC1-221ENST00000522720 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
PABPC1-221ENST00000522720 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
PABPC1-221ENST00000522720 H3BRM9 83 aa10.16□□□□□ -0.78
PABPC1-221ENST00000522720 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
PABPC1-221ENST00000522720 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
PABPC1-221ENST00000522720 LOC105371267A0A1B0GV96 52 aa10.15□□□□□ -0.78
PABPC1-221ENST00000522720 PHF5AQ7RTV0 110 aaKnown RBP10.15□□□□□ -0.78
PABPC1-221ENST00000522720 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
PABPC1-221ENST00000522720 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
PABPC1-221ENST00000522720 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-221ENST00000522720 FAM19A5Q7Z5A7 132 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-221ENST00000522720 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
PABPC1-221ENST00000522720 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
PABPC1-221ENST00000522720 HERVK_113P61574 105 aa10.12□□□□□ -0.79
PABPC1-221ENST00000522720 SRSF9Q13242 221 aaKnown RBP eCLIP10.12□□□□□ -0.79
PABPC1-221ENST00000522720 TMEM170BQ5T4T1 132 aa10.12□□□□□ -0.79
PABPC1-221ENST00000522720 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
PABPC1-221ENST00000522720 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
PABPC1-221ENST00000522720 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
PABPC1-221ENST00000522720 PMCHL2Q9BQD1 86 aa10.11□□□□□ -0.79
PABPC1-221ENST00000522720 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
PABPC1-221ENST00000522720 M0QXV9 152 aa10.08□□□□□ -0.8
PABPC1-221ENST00000522720 S100A12P80511 92 aa10.08□□□□□ -0.8
PABPC1-221ENST00000522720 PYY3Q5JQD4 70 aa10.08□□□□□ -0.8
PABPC1-221ENST00000522720 KRTAP11-1Q8IUC1 163 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms