RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 C14orf144Q96I85 54 aa8.75□□□□□ -1.01
CLK4-210ENST00000522136 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
CLK4-210ENST00000522136 DNAH2Q9P225 4427 aa8.75□□□□□ -1.01
CLK4-210ENST00000522136 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.75□□□□□ -1.01
CLK4-210ENST00000522136 CKS1BP61024 79 aa8.75□□□□□ -1.01
CLK4-210ENST00000522136 LINC00518Q8N0U6 118 aa8.75□□□□□ -1.01
CLK4-210ENST00000522136 ZNF625Q96I27 306 aaPredicted RBP8.75□□□□□ -1.01
CLK4-210ENST00000522136 RYR2Q92736 4967 aa8.74□□□□□ -1.01
CLK4-210ENST00000522136 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLK4-210ENST00000522136 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
CLK4-210ENST00000522136 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
CLK4-210ENST00000522136 Q6ZRU5 148 aa8.73□□□□□ -1.01
CLK4-210ENST00000522136 Q8N814 137 aa8.73□□□□□ -1.01
CLK4-210ENST00000522136 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 C2orf48Q96LS8 159 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 MYMXA0A1B0GTQ4 84 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 NDUFA1O15239 70 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 COX8AP10176 69 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
CLK4-210ENST00000522136 PRO1933Q9H354 126 aa8.72□□□□□ -1.01
CLK4-210ENST00000522136 CXCL5P42830 114 aa8.71□□□□□ -1.02
CLK4-210ENST00000522136 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
CLK4-210ENST00000522136 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
CLK4-210ENST00000522136 CARD19Q96LW7 228 aa8.69□□□□□ -1.02
CLK4-210ENST00000522136 DNAH17Q9UFH2 4485 aa8.69□□□□□ -1.02
CLK4-210ENST00000522136 FRAS1Q86XX4 4008 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 A0A0J9YXY3 114 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 EREGO14944 169 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 HERV-K104P63124 156 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
CLK4-210ENST00000522136 F8WDY8 70 aa8.67□□□□□ -1.02
CLK4-210ENST00000522136 PFN2P35080 140 aa8.67□□□□□ -1.02
CLK4-210ENST00000522136 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
CLK4-210ENST00000522136 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 KRTAP10-2P60368 255 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 MEIG1Q5JSS6 88 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 SCGB1D4Q6XE38 83 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 DLEU1O43261 78 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 SFTA2Q6UW10 78 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
CLK4-210ENST00000522136 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.65□□□□□ -1.02
CLK4-210ENST00000522136 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.02
CLK4-210ENST00000522136 LINC00158P58513 81 aa8.64□□□□□ -1.03
CLK4-210ENST00000522136 DAND5Q8N907 189 aa8.64□□□□□ -1.03
CLK4-210ENST00000522136 UQCR10Q9UDW1 63 aa8.64□□□□□ -1.03
CLK4-210ENST00000522136 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
CLK4-210ENST00000522136 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
CLK4-210ENST00000522136 LITAFQ99732 161 aa8.64□□□□□ -1.03
CLK4-210ENST00000522136 RYR3Q15413 4870 aa8.63□□□□□ -1.03
CLK4-210ENST00000522136 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
CLK4-210ENST00000522136 RNF151Q2KHN1 245 aa8.63□□□□□ -1.03
CLK4-210ENST00000522136 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
CLK4-210ENST00000522136 Q6ZRP5 223 aa8.62□□□□□ -1.03
CLK4-210ENST00000522136 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
CLK4-210ENST00000522136 FAT2Q9NYQ8 4349 aa8.62□□□□□ -1.03
CLK4-210ENST00000522136 CIRBPQ14011 172 aaKnown RBP8.61□□□□□ -1.03
CLK4-210ENST00000522136 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 TSTD3H0UI37 97 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 TIMM17BO60830 172 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 NPC2P61916 151 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
CLK4-210ENST00000522136 COX17Q14061 63 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
CLK4-210ENST00000522136 A0A1B0GVY2 172 aa8.6□□□□□ -1.03
CLK4-210ENST00000522136 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
CLK4-210ENST00000522136 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
CLK4-210ENST00000522136 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
CLK4-210ENST00000522136 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 TMEM238C9JI98 176 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
CLK4-210ENST00000522136 SND1-IT1Q9HBX3 110 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 HIGD1BQ9P298 99 aa8.59□□□□□ -1.03
CLK4-210ENST00000522136 A0A096LNI7 61 aa8.58□□□□□ -1.04
CLK4-210ENST00000522136 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLK4-210ENST00000522136 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 SOSTDC1Q6X4U4 206 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 DNAH11Q96DT5 4516 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 SPANXB1Q9NS25 103 aaPredicted RBP8.57□□□□□ -1.04
CLK4-210ENST00000522136 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CLK4-210ENST00000522136 PANO1I0J062 215 aa8.56□□□□□ -1.04
CLK4-210ENST00000522136 C9orf129Q5T035 196 aaKnown RBP8.56□□□□□ -1.04
CLK4-210ENST00000522136 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
CLK4-210ENST00000522136 GCSHP23434 173 aa8.55□□□□□ -1.04
CLK4-210ENST00000522136 PTTG1IPP53801 180 aa8.55□□□□□ -1.04
CLK4-210ENST00000522136 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
CLK4-210ENST00000522136 PKD1P98161 4303 aa8.55□□□□□ -1.04
CLK4-210ENST00000522136 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms