RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	C9orf116	Q5BN46	136 aa	Predicted RBP	5.26	□□□□□ -1.57
CTNNA1-231	ENST00000521941	C6orf226	Q5I0X4	101 aa		5.26	□□□□□ -1.57
CTNNA1-231	ENST00000521941		Q6ZRP5	223 aa		5.26	□□□□□ -1.57
CTNNA1-231	ENST00000521941	BAGE3	Q86Y29	109 aa		5.26	□□□□□ -1.57
CTNNA1-231	ENST00000521941		Q8IZM0	81 aa		5.26	□□□□□ -1.57
CTNNA1-231	ENST00000521941	TRBV30	A0A0K0K1B3	111 aa		5.25	□□□□□ -1.57
CTNNA1-231	ENST00000521941		A0A1W2PNN7	141 aa		5.25	□□□□□ -1.57
CTNNA1-231	ENST00000521941	SMIM1	B2RUZ4	78 aa		5.25	□□□□□ -1.57
CTNNA1-231	ENST00000521941	HSBP1	O75506	76 aa		5.25	□□□□□ -1.57
CTNNA1-231	ENST00000521941	RNF151	Q2KHN1	245 aa		5.25	□□□□□ -1.57
CTNNA1-231	ENST00000521941	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.25	□□□□□ -1.57
CTNNA1-231	ENST00000521941	SRRM2	Q9UQ35	2752 aa	Known RBP	5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	FAM168B	A1KXE4	195 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941		H0Y8G0	127 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941		J3QL48	77 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	ATP5L	O75964	103 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	PDZD11	Q5EBL8	140 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	PHF5A	Q7RTV0	110 aa	Known RBP	5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	FAM19A2	Q8N3H0	131 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	COX7B2	Q8TF08	81 aa		5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	CHCHD1	Q96BP2	118 aa	Known RBP	5.24	□□□□□ -1.57
CTNNA1-231	ENST00000521941	IGLV5-45	A0A087WSX0	123 aa		5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	NDUFC2-KCTD14	E9PQ53	114 aa		5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941		H3BRM9	83 aa		5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	TLX1NB	P0CAT3	122 aa		5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	IGLC3	P0DOY3	106 aa		5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	ZNF22	P17026	224 aa	Predicted RBP	5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	PRR3	P79522	188 aa	Known RBP	5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	IFI27L1	Q96BM0	104 aa		5.23	□□□□□ -1.57
CTNNA1-231	ENST00000521941	C11orf86	A6NJI1	115 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941	COLCA2	A8K830	154 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941		F8VRH5	84 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941	SERF1A	O75920	110 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941	CXCL5	P42830	114 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941	TMEM170B	Q5T4T1	132 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941	MYCBP2	O75592	4640 aa		5.22	□□□□□ -1.57
CTNNA1-231	ENST00000521941		M0QXV9	152 aa		5.21	□□□□□ -1.58
CTNNA1-231	ENST00000521941	C9orf129	Q5T035	196 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-231	ENST00000521941	XAGE1A	Q9HD64	81 aa		5.21	□□□□□ -1.58
CTNNA1-231	ENST00000521941	LINC00310	P59036	64 aa		5.2	□□□□□ -1.58
CTNNA1-231	ENST00000521941	UBE2B	P63146	152 aa		5.2	□□□□□ -1.58
CTNNA1-231	ENST00000521941	PKHD1L1	Q86WI1	4243 aa		5.19	□□□□□ -1.58
CTNNA1-231	ENST00000521941	NUPR1	O60356	82 aa		5.19	□□□□□ -1.58
CTNNA1-231	ENST00000521941	LEPROTL1	O95214	131 aa		5.19	□□□□□ -1.58
CTNNA1-231	ENST00000521941	FABP4	P15090	132 aa		5.19	□□□□□ -1.58
CTNNA1-231	ENST00000521941	ZNF625	Q96I27	306 aa	Predicted RBP	5.19	□□□□□ -1.58
CTNNA1-231	ENST00000521941	PSORS1C2	Q9UIG4	136 aa		5.19	□□□□□ -1.58
CTNNA1-231	ENST00000521941	TRAV12-1	A0A0B4J245	112 aa		5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	IGLV5-39	A0A0G2JS06	123 aa		5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	PFN2	P35080	140 aa		5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	C1orf137	Q5JT78	98 aa		5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	SERTAD4-AS1	Q5TG53	156 aa		5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	KRTAP7-1	Q8IUC3	87 aa		5.18	□□□□□ -1.58
CTNNA1-231	ENST00000521941	KRTAP11-1	Q8IUC1	163 aa		5.17	□□□□□ -1.58
CTNNA1-231	ENST00000521941	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.17	□□□□□ -1.58
CTNNA1-231	ENST00000521941	TMEM223	A0PJW6	202 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BK	O60814	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	OXT	P01178	125 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BJ	P06899	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BO	P23527	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BB	P33778	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BD	P58876	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BC	P62807	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	ODF1	Q14990	250 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST2H2BE	Q16778	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BH	Q93079	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BN	Q99877	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HIST1H2BM	Q99879	126 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	PMCHL2	Q9BQD1	86 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	HSPB8	Q9UJY1	196 aa		5.16	□□□□□ -1.58
CTNNA1-231	ENST00000521941	LRP1	Q07954	4544 aa	Known RBP	5.15	□□□□□ -1.58
CTNNA1-231	ENST00000521941		A0A0U1RRA0	63 aa		5.15	□□□□□ -1.59
CTNNA1-231	ENST00000521941	ERG28	Q9UKR5	140 aa		5.15	□□□□□ -1.59
CTNNA1-231	ENST00000521941	C22orf24	Q9Y442	160 aa		5.15	□□□□□ -1.59
CTNNA1-231	ENST00000521941	GAGE10	A6NGK3	116 aa		5.14	□□□□□ -1.59
CTNNA1-231	ENST00000521941	SPINK6	Q6UWN8	80 aa		5.14	□□□□□ -1.59
CTNNA1-231	ENST00000521941	NKAPP1	Q8N9T2	125 aa		5.14	□□□□□ -1.59
CTNNA1-231	ENST00000521941	FAT3	Q8TDW7	4589 aa		5.14	□□□□□ -1.59
CTNNA1-231	ENST00000521941	RPL37AP8	A6NKH3	93 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	DPM2	O94777	84 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	IGLV7-43	P04211	117 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	LINC00158	P58513	81 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	LBH	Q53QV2	105 aa	Predicted RBP	5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	MEIG1	Q5JSS6	88 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	REG3G	Q6UW15	175 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	MRPL55	Q7Z7F7	128 aa	Known RBP	5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	MAP1LC3C	Q9BXW4	147 aa		5.13	□□□□□ -1.59
CTNNA1-231	ENST00000521941	IGKC	P01834	107 aa		5.12	□□□□□ -1.59
CTNNA1-231	ENST00000521941	PLN	P26678	52 aa		5.12	□□□□□ -1.59
CTNNA1-231	ENST00000521941	HERVK_113	P61574	105 aa		5.12	□□□□□ -1.59
CTNNA1-231	ENST00000521941	SFTA2	Q6UW10	78 aa		5.12	□□□□□ -1.59
CTNNA1-231	ENST00000521941	SND1-IT1	Q9HBX3	110 aa		5.12	□□□□□ -1.59
CTNNA1-231	ENST00000521941	ATP6V1G1	O75348	118 aa		5.11	□□□□□ -1.59
CTNNA1-231	ENST00000521941	SMIM13	P0DJ93	91 aa		5.11	□□□□□ -1.59
CTNNA1-231	ENST00000521941	TSPEAR-AS2	P59090	65 aa		5.11	□□□□□ -1.59
CTNNA1-231	ENST00000521941	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
CTNNA1-231	ENST00000521941	LINC00167	Q96N53	147 aa		5.11	□□□□□ -1.59

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